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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027992 ID=TCONS_00027992|Name=TCONS_00027992|organism=Clytia hemisphaerica|type=transcript|length=1465bp
GTTGGTAGCTATTACCACTGCTAACCAGACTTGATCCAAATAATGTTACC
AAATTCAGAATAAATTCTCTTAATTTCctgatgttttttatttaactttt
aaTGGACTTCTTTTATACTAAATTTCTAGTGACACATGGTTtgctgtttg
tcttcttggtttCGCTATTTACAAAGGGTCAGCAAGCAATATTTTCCTAT
TTACAtcgaataataataatattataAACATATTTGTTAATTAAAGTTAT
GATGACGACCATTATATATTTCAGGGGCCctatgatgtaatcttttcaaC
GAGTTTATTCTCGAAGAAAACGCTACGTCATGGTAAAAAAAGGACCAATC
TTAAAGTGGGTTAGAGAAGAGAGGGGAATTAATGTCCACGGTTCCGTCCT
CATTTCTCAAACCCATTTGACCGCTAATTCTATTTCAGCTTAATCTATAA
GCACCgatcaaaattctaaaaaaatattccaaaaaaaataataacaatca
atataaaaaaacaaaacaaaaagatttgggAATTTCTAAGGACAACTAAA
AAAGGGCATCACAGGCGTGAAGTCTTCATAGAATTTAATTTTGGGCGGAA
TAAGTTTCACAGGAATCAAATTTTACGAATTCGGATGTCGAAACTTAAAT
tattgggacgagatggagtttttacaaactcttatttgatttcgttggtc
gttaaccagtaataaaacaattttgttactttttctaaagaacagatcat
ttttattacttcaaatgaccaattattaaagtatcttataaaaacccCTT
CTCATCTGAAATTATTTCGCGCCTATTGGTCAACTCCTCCTGCAAAAAAA
TCGTCGAAAATTTCACCGCGTCTCTTCACCGGAAAATCCGACATATAGTT
CGACAGAAATGAACTATATAACGACGGACGGAAAGTTCTTCGAAGAAAAG
ACGTGGAAAGAGCCGtcaaaaatatgtaaaaagaaaGATGCAATTCGAAA
TTAAAAATAGAGTGGTAACAAAAATACTATAACGATTAGatttaagaaat
taaaaattgtgaaatataaaaatttatcaaaggAATAATGGTGAATAGGA
AAGGGCTTCAAAATATACGTGACCGAGAAAAGGTGGATAAAATACATACA
TAACTTCATCCTACTCAGCGTGTAATTGCCCTATCAACCCTAACTGTTAA
AGAGGCTTTGGTTGAAAATTATTTGGATTGACAGACGTCAAATGTTAATT
TCTGAGAGCacaacaatgcaatgacttcaaataCTTAACATCTAAATAAC
TTGAACCCGATCCTTAAAGGGaatagcgctatacttatagtaggggtcgg
agCACTGACCTtcatataaccctggaccaagcaatatctgccatctttga
ttggagtttttttagaattggtacccaaggagaagccattgcaatgctaa
aaattaacgtctaac Run BLAST on NCBI transcript from alignment at sc0000660:151924..153388 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027992 ID=TCONS_00027992|Name=TCONS_00027992|organism=Clytia hemisphaerica|type=transcript|length=1465bp|location=Sequence derived from alignment at sc0000660:151924..153388 (Clytia hemisphaerica)
gttagacgttaatttttagcattgcaatggcttctccttgggtaccaatt
ctaaaaaaactccaatcaaagatggcagatattgcttggtccagggttat
atgaAGGTCAGTGctccgacccctactataagtatagcgctattCCCTTT
AAGGATCGGGTTCAAGTTATTTAGATGTTAAGtatttgaagtcattgcat
tgttgtGCTCTCAGAAATTAACATTTGACGTCTGTCAATCCAAATAATTT
TCAACCAAAGCCTCTTTAACAGTTAGGGTTGATAGGGCAATTACACGCTG
AGTAGGATGAAGTTATGTATGTATTTTATCCACCTTTTCTCGGTCACGTA
TATTTTGAAGCCCTTTCCTATTCACCATTATTcctttgataaatttttat
atttcacaatttttaatttcttaaatCTAATCGTTATAGTATTTTTGTTA
CCACTCTATTTTTAATTTCGAATTGCATCtttctttttacatatttttga
CGGCTCTTTCCACGTCTTTTCTTCGAAGAACTTTCCGTCCGTCGTTATAT
AGTTCATTTCTGTCGAACTATATGTCGGATTTTCCGGTGAAGAGACGCGG
TGAAATTTTCGACGATTTTTTTGCAGGAGGAGTTGACCAATAGGCGCGAA
ATAATTTCAGATGAGAAGgggtttttataagatactttaataattggtca
tttgaagtaataaaaatgatctgttctttagaaaaagtaacaaaattgtt
ttattactggttaacgaccaacgaaatcaaataagagtttgtaaaaactc
catctcgtcccaataATTTAAGTTTCGACATCCGAATTCGTAAAATTTGA
TTCCTGTGAAACTTATTCCGCCCAAAATTAAATTCTATGAAGACTTCACG
CCTGTGATGCCCTTTTTTAGTTGTCCTTAGAAATTcccaaatctttttgt
tttgtttttttatattgattgttattattttttttggaatatttttttag
aattttgatcGGTGCTTATAGATTAAGCTGAAATAGAATTAGCGGTCAAA
TGGGTTTGAGAAATGAGGACGGAACCGTGGACATTAATTCCCCTCTCTTC
TCTAACCCACTTTAAGATTGGTCCTTTTTTTACCATGACGTAGCGTTTTC
TTCGAGAATAAACTCGttgaaaagattacatcatagGGCCCCTGAAATAT
ATAATGGTCGTCATCATAACTTTAATTAACAAATATGTTtataatattat
tattattcgaTGTAAATAGGAAAATATTGCTTGCTGACCCTTTGTAAATA
GCGaaaccaagaagacaaacagcaAACCATGTGTCACTAGAAATTTAGTA
TAAAAGAAGTCCAttaaaagttaaataaaaaacatcagGAAATTAAGAGA
ATTTATTCTGAATTTGGTAACATTATTTGGATCAAGTCTGGTTAGCAGTG
GTAATAGCTACCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027992-exon-sc0000660-1491911889:151924..153388 | TCONS_00027992-exon-sc0000660-1491911889:151924..153388 | Clytia hemisphaerica | exon |
| TCONS_00027992-exon-sc0000660-1510915933:151924..153388 | TCONS_00027992-exon-sc0000660-1510915933:151924..153388 | Clytia hemisphaerica | exon |
| TCONS_00027992-exon-sc0000660-1575043694:151924..153388 | TCONS_00027992-exon-sc0000660-1575043694:151924..153388 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000660 | supercontig | sc0000660:151924..153388 . |
Blast
The following BLAST results are available for this feature:
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