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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027949 ID=TCONS_00027949|Name=TCONS_00027949|organism=Clytia hemisphaerica|type=transcript|length=1405bp
ttttaataataataatgatAACTTCAAAAAACACAGAAATCTGCTTTCCA
AACTCTTAAGATTAAGCAAAAACTCCTACTATAAAACCTTCTTTTCTGAG
AATAGACATGACTTGAAACAAAAATGGAAGGCAGTGAATGAAATAATTGG
TATTAAATAATACTGACCTTTTCCCTAAACTAATTTTCCATAACAAGANA
GACATGACTTGAAACAAAAATGGAAGGCAGTGAATGAAATAATTGGTATT
AAATAATACTGACCTTTTCCCTAAACTAATTTTCCATAACAGACTTCAAA
TTACGAATGATAAAGACATGGCTGAAGTATTTAATGACTTCTATGGCTCA
AtagcagaaaaaacaaaacagcaaATTCCTAggacaaacaaaaactttac
tGACCTTCTTAACGACCAGGCTCTCAACTCCATCTACTTCAATAAAATTA
CGCCTACTGCGTTCTTAAAACTTATTAATGAACTTGACATCAGTAAAGCT
TCAGGTCCTGATAGTATTCCAACCTCTTTCCTAACTAATTGCTCCAACAG
TAAGCACTGTCCTAGCTCACATTTTCAACAGCTGTGTTAGTGATGGCATC
TATCCAGaatgtcaaaatttttgaaaagcttataAATCACAGACTAGTTC
GCTTCTTTGATCATAATTATACCCGGTTACTGACAAACAATTTGGTTTTA
GGAAAGGTCACAGCACGAACCATGCTGTGATTGCTCTAACAGAACTTGTG
AGAAAAGCCTTAACACTGGACAGTTTGCTGCTGGAGTTTTTATCGATCTT
AAAAAAGTCTTTGACACTGTAGATCATGAAATTCTTCTCCATAAACTAGA
ACACTATGGTATTAGAAATCCTACTCTTGCTGTGCTCAAATCATACCTTG
TTAACAGATCTCAATGCATCGAGATAAGAAATTCTCATTCCAAATTCATA
CCAATAAGGCATGGTGTCCCTCAGGGGTCAGTTCTAGGCCCTCTCTTGTT
CATTATCTATATAAATGATCTGCACTCATCACTACACTAGAAAACTATAC
GACCATTCACTTTGCAGATGACACAAGTCTTATTTGCtgtgataatttaa
taaaaggACTCAACAGAAAGGTGAACCTTATTCCTGCTCTTCTAGTCCAT
TGGTTGAGAGCAAATAAAATTAGCCTTAATACTTCTAAAACTGAATTGAT
CTTGTTCAGATCATCCAGGAATGCAATTactaaaaatcttaattttagaC
TCAGTGAACAGAAAATTCACCCAAAAAATAAGGCTAAGTATCTTGGAATA
ATACTTGATGAGCACCTTTCCTGGGACCCTCAAGTACATGATCTAGTTAC
AAAACTTTCCCGAACAGTGGGATTTCTATCTAAACTAAGACACTTTGTTG
ATCTC Run BLAST on NCBI transcript from alignment at sc0000658:17457..18861 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027949 ID=TCONS_00027949|Name=TCONS_00027949|organism=Clytia hemisphaerica|type=transcript|length=1405bp|location=Sequence derived from alignment at sc0000658:17457..18861 (Clytia hemisphaerica)
GAGATCAACAAAGTGTCTTAGTTTAGATAGAAATCCCACTGTTCGGGAAA
GTTTTGTAACTAGATCATGTACTTGAGGGTCCCAGGAAAGGTGCTCATCA
AGTATTATTCCAAGATACTTAGCCTTATTTTTTGGGTGAATTTTCTGTTC
ACTGAGtctaaaattaagatttttagtAATTGCATTCCTGGATGATCTGA
ACAAGATCAATTCAGTTTTAGAAGTATTAAGGCTAATTTTATTTGCTCTC
AACCAATGGACTAGAAGAGCAGGAATAAGGTTCACCTTTCTGTTGAGTcc
ttttattaaattatcacaGCAAATAAGACTTGTGTCATCTGCAAAGTGAA
TGGTCGTATAGTTTTCTAGTGTAGTGATGAGTGCAGATCATTTATATAGA
TAATGAACAAGAGAGGGCCTAGAACTGACCCCTGAGGGACACCATGCCTT
ATTGGTATGAATTTGGAATGAGAATTTCTTATCTCGATGCATTGAGATCT
GTTAACAAGGTATGATTTGAGCACAGCAAGAGTAGGATTTCTAATACCAT
AGTGTTCTAGTTTATGGAGAAGAATTTCATGATCTACAGTGTCAAAGACT
TTTTTAAGATCGATAAAAACTCCAGCAGCAAACTGTCCAGTGTTAAGGCT
TTTCTCACAAGTTCTGTTAGAGCAATCACAGCATGGTTCGTGCTGTGACC
TTTCCTAAAACCAAATTGTTTGTCAGTAACCGGGTATAATTATGATCAAA
GAAGCGAACTAGTCTGTGATTtataagcttttcaaaaattttgacattCT
GGATAGATGCCATCACTAACACAGCTGTTGAAAATGTGAGCTAGGACAGT
GCTTACTGTTGGAGCAATTAGTTAGGAAAGAGGTTGGAATACTATCAGGA
CCTGAAGCTTTACTGATGTCAAGTTCATTAATAAGTTTTAAGAACGCAGT
AGGCGTAATTTTATTGAAGTAGATGGAGTTGAGAGCCTGGTCGTTAAGAA
GGTCagtaaagtttttgtttgtccTAGGAATttgctgttttgttttttct
gctaTTGAGCCATAGAAGTCATTAAATACTTCAGCCATGTCTTTATCATT
CGTAATTTGAAGTCTGTTATGGAAAATTAGTTTAGGGAAAAGGTCAGTAT
TATTTAATACCAATTATTTCATTCACTGCCTTCCATTTTTGTTTCAAGTC
ATGTCTNTCTTGTTATGGAAAATTAGTTTAGGGAAAAGGTCAGTATTATT
TAATACCAATTATTTCATTCACTGCCTTCCATTTTTGTTTCAAGTCATGT
CTATTCTCAGAAAAGAAGGTTTTATAGTAGGAGTTTTTGCTTAATCTTAA
GAGTTTGGAAAGCAGATTTCTGTGTTTTTTGAAGTTatcattattattat
taaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027949-exon-sc0000658-1491911889:17457..18861 | TCONS_00027949-exon-sc0000658-1491911889:17457..18861 | Clytia hemisphaerica | exon |
| TCONS_00027949-exon-sc0000658-1510915933:17457..18861 | TCONS_00027949-exon-sc0000658-1510915933:17457..18861 | Clytia hemisphaerica | exon |
| TCONS_00027949-exon-sc0000658-1575043694:17457..18861 | TCONS_00027949-exon-sc0000658-1575043694:17457..18861 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000658 | supercontig | sc0000658:17457..18861 . |
Blast
The following BLAST results are available for this feature:
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