TCONS_00050544-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050544-protein
Unique NameTCONS_00050544-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length616

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050544-protein ID=TCONS_00050544-protein|Name=TCONS_00050544-protein|organism=Clytia hemisphaerica|type=polypeptide|length=616bp
QIMMNYHHVVVLDVNILQSKQITQKFLQNEKINSSFWYKNDTKASELGTQ
KKLFKKFLEANQNSNKFGYLISINLRDEYQPIRVQAKRSGVADSLDFIIP
DVRQIGKPKVTFVSYDHFKISVTKPNNTWVTHFLVEYWPIIDDSEESKTS
LKFAFSLQNTQNVTITNLNYLTTYEVRIVHVTEFGISPTGEKVSVTTKPS
SEPTVLKFQSSESSLKISWSEPVYQANGIKIKDYRVVLKDSVGQVVADQQ
VQDVTNIKFDNLNAVTKYIVTVKAIAEFIRKDSTNTTKKIQEYSHPATLI
AFTAANPLNPNSFQANADYYSVTLDLGKSNITQVPRVTGYVVRYSLMDST
GQNIKPGTSRTQSFPGNNDPKKIIGLASGFTYGLEVQEITTVGKSIFSSP
IFIVRTDPRVTNGGYSQWTSWSVCNRMCGPGQQTRSRTCTNPDPSNGGTN
CESLGQSSQTKSCNLKSCFETNIQECSWSRNIMVHGSGPVKYCYFNKKHS
TTSLLVSVKTMVTVIGISRIFANCIRYYVTFNGNECSTPIDQAIQIGSYK
NKLTMPITIRGICKLTNRCGNIKVGLNVNECDSGVYTDDTDYGRYATSSI
IIEEVENARLTTARTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032011XLOC_032011Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050544TCONS_00050544Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR000884TSP1_rpt
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 102..187
e-value: 0.1
score: 21.7
coord: 200..283
e-value: 0.049
score: 22.8
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 201..275
e-value: 3.7E-7
score: 30.3
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 202..297
score: 8.845
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 104..200
score: 15.866
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 306..409
score: 10.525
IPR003961Fibronectin type IIICDDcd00063FN3coord: 201..275
e-value: 1.13657E-4
score: 39.7871
IPR003961Fibronectin type IIICDDcd00063FN3coord: 106..197
e-value: 1.69406E-7
score: 48.2615
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 108..276
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 415..469
e-value: 1.9E-9
score: 47.4
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 413..468
e-value: 3.2E-14
score: 52.4
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 416..468
e-value: 3.3E-6
score: 27.1
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 412..469
score: 12.068
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 410..468
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 204..299
e-value: 3.6E-9
score: 36.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 302..412
e-value: 3.2E-4
score: 20.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 103..203
e-value: 8.9E-9
score: 35.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..458

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050544-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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