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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027885 ID=TCONS_00027885|Name=TCONS_00027885|organism=Clytia hemisphaerica|type=transcript|length=1171bp
AAACAAcagaatttatcaaaatttatgctCAAACAGCGCTAAAAAGGGAG
AATgatgttctttcttttttttaaataatgctGTGTATTCAAATGAAAGG
AGATACGTTAAATGTGAGTCTACATTGGAGATTGTCTCCTTGTCTTGGTT
TCCTTGGACCCAGCGAATTCGAGTACATTAAATTCATCTGGCTTTACACC
GGCACATCTATGGACGTCTTGCTGGCAACACTCCTGTCGAGTCCAGTAAT
CTATCAATCACAACCAGTAATAAGTCGGAAGACAGTTTGTCAGTAACATT
TGTGtcaattctatttttagaaaaggattTAGCTTAAAGGGAGGCATTTT
CTGGCAATTCTTTGGTAATAAAGAACAATTGCCAGCAATTTGCCAGCAAC
AAAAAAAAGGTTAACTGTTTTTGCCAGCACTTTTCTATCTGATGTAAGCT
GGCGATTTTATTCCAAACAAATAACTGGCTGATTGCCAGCAAAAACAAGG
CCAGCTTATTAATGGCAAAAATTTTAATCACTTGTATGGTCAAGAATGAT
GACCATTAAAAATATATTCTTGGCTTACTGCAGGGAAAATTCTCAAAAGT
TGAAAGGGTTTGACCAAATCCTCCCTCGCCTCTTAGCGAACAACCTTCGA
AAgccaatcaaaaatttttcccttgctaaaagataaaaattcaccccctg
gaaaatatttAGATTGCTTTATTTTGCTCAATCTCAAACTTTCATGAAAG
TGCCAAATATTTTGCTATCCAAAAAATTGCTGTGCAATTGTttaaaaaca
agtgatattttaatggacctacctggttatcaaactaatcaatggacatt
gaaacaatgaaacacatgagacataactggtcaaaatacaaaaaaaataa
agaaaaatgaaagcatatctattgggagaaattataacactattgaaaaa
gatttttttgttcaACCTTTCAACCTTACAACAccaatcaaccaaccaaa
ttttgtcattcagtTCCCAAGCAGTGCTTCAATTTGTTAGGCCTTGATTA
TagactaaagtaaaaataattccgcacatatGTATGTAACAGTCTAAGCt
taactcctatatcaggatcagaaactaggctagtcttacctcttttatct
ttccctttacaacaatacaat Run BLAST on NCBI transcript from alignment at sc0000649:181326..182496 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027885 ID=TCONS_00027885|Name=TCONS_00027885|organism=Clytia hemisphaerica|type=transcript|length=1171bp|location=Sequence derived from alignment at sc0000649:181326..182496 (Clytia hemisphaerica)
attgtattgttgtaaagggaaagataaaagaggtaagactagcctagttt
ctgatcctgatataggagttaaGCTTAGACTGTTACATACatatgtgcgg
aattatttttactttagtctATAATCAAGGCCTAACAAATTGAAGCACTG
CTTGGGAactgaatgacaaaatttggttggttgattggTGTTGTAAGGTT
GAAAGGTtgaacaaaaaaatctttttcaatagtgttataatttctcccaa
tagatatgctttcatttttctttattttttttgtattttgaccagttatg
tctcatgtgtttcattgtttcaatgtccattgattagtttgataaccagg
taggtccattaaaatatcacttgtttttaaACAATTGCACAGCAATTTTT
TGGATAGCAAAATATTTGGCACTTTCATGAAAGTTTGAGATTGAGCAAAA
TAAAGCAATCTaaatattttccagggggtgaatttttatcttttagcaag
ggaaaaatttttgattggcTTTCGAAGGTTGTTCGCTAAGAGGCGAGGGA
GGATTTGGTCAAACCCTTTCAACTTTTGAGAATTTTCCCTGCAGTAAGCC
AAGAATATATTTTTAATGGTCATCATTCTTGACCATACAAGTGATTAAAA
TTTTTGCCATTAATAAGCTGGCCTTGTTTTTGCTGGCAATCAGCCAGTTA
TTTGTTTGGAATAAAATCGCCAGCTTACATCAGATAGAAAAGTGCTGGCA
AAAACAGTTAACCTTTTTTTTGTTGCTGGCAAATTGCTGGCAATTGTTCT
TTATTACCAAAGAATTGCCAGAAAATGCCTCCCTTTAAGCTAaatccttt
tctaaaaatagaattgaCACAAATGTTACTGACAAACTGTCTTCCGACTT
ATTACTGGTTGTGATTGATAGATTACTGGACTCGACAGGAGTGTTGCCAG
CAAGACGTCCATAGATGTGCCGGTGTAAAGCCAGATGAATTTAATGTACT
CGAATTCGCTGGGTCCAAGGAAACCAAGACAAGGAGACAATCTCCAATGT
AGACTCACATTTAACGTATCTCCTTTCATTTGAATACACagcattattta
aaaaaaagaaagaacatcATTCTCCCTTTTTAGCGCTGTTTGagcataaa
ttttgataaattctgTTGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027885-exon-sc0000649-1491911889:181326..182496 | TCONS_00027885-exon-sc0000649-1491911889:181326..182496 | Clytia hemisphaerica | exon |
| TCONS_00027885-exon-sc0000649-1510915933:181326..182496 | TCONS_00027885-exon-sc0000649-1510915933:181326..182496 | Clytia hemisphaerica | exon |
| TCONS_00027885-exon-sc0000649-1575043694:181326..182496 | TCONS_00027885-exon-sc0000649-1575043694:181326..182496 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000649 | supercontig | sc0000649:181326..182496 . |
Blast
The following BLAST results are available for this feature:
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