TCONS_00048927-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048927-protein
Unique NameTCONS_00048927-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length644

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048927-protein ID=TCONS_00048927-protein|Name=TCONS_00048927-protein|organism=Clytia hemisphaerica|type=polypeptide|length=644bp
VALESRDKKEPSFFVLGRFCSQRCVGAYASKRRTQLIQQQLESGERPPTK
QTNKKSGVKKKKTESKDGTPSSPSLNKNKKQIKQEIKDDSILYFQTVGHH
TGFCWETYLQITATKSVPVEAFFKEYDEQEILPQSTTNQFEQGMKLECID
PKHQSIICCCTVVEVQGARLRLNFDGWPANYDFWINSNSFFLHPCGWCSK
NQQKLQPPKDIDPKDFEWSTYLMKTQSKAAPANLFFDTPPVSRHAFRISM
KLEAIDRKNPDLVCVASVANTIGDQILIHFDEWDDLYDYWCREDNPYIHP
MGWCQKNQIALVPPTDEMVGKFVWKDYLNDSDCIAAPDEVFKEPKKLLFV
IGDKMEVIDPRNPTLCRVATVNRAEDFKVQIHFDGWPSMYDWWFDFDSMD
LHPVGWCQKTGHVLEPPPSGQDATSPCGIQGCRGVGHIKGAKYTTHHTSF
GCPYTSQNIHRTTSPVVDRLVMDSEEVFAGSTPSNKSNENSPTSTVFPDS
TTNYKNMVKSKKAKDKSNKGMNRKRKRRGSDEVSSSTNFLHEEQITKHEY
SPMDIPKKIRSTHIPAGLYGRNTYFERKSQAIPWNTQEVGEFLSRIGYAE
YVPIFKDNQIDGQALLLLSQADLVHHLNLKLGPALKIYSEISKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031078XLOC_031078Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048927TCONS_00048927Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR004092Mbt
IPR002515Znf_C2HC
IPR013761SAM/pointed
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 581..644
e-value: 1.7E-7
score: 40.9
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 584..644
e-value: 8.6E-14
score: 51.6
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 584..644
score: 12.512
IPR004092Mbt repeatSMARTSM00561l3mbt_4coord: 216..314
e-value: 3.7E-40
score: 149.4
coord: 322..417
e-value: 8.0E-30
score: 115.1
coord: 103..208
e-value: 5.2E-35
score: 132.3
IPR004092Mbt repeatPFAMPF02820MBTcoord: 250..316
e-value: 1.8E-27
score: 95.3
coord: 144..211
e-value: 4.6E-27
score: 94.1
coord: 354..418
e-value: 2.7E-23
score: 82.0
IPR004092Mbt repeatPROSITEPS51079MBTcoord: 322..417
score: 31.511
IPR004092Mbt repeatPROSITEPS51079MBTcoord: 103..208
score: 33.349
IPR004092Mbt repeatPROSITEPS51079MBTcoord: 216..314
score: 36.324
NoneNo IPR availableGENE3D1.10.150.50coord: 571..644
e-value: 3.9E-19
score: 68.0
NoneNo IPR availableGENE3D2.30.30.140coord: 225..317
e-value: 7.7E-39
score: 132.4
coord: 318..527
e-value: 7.6E-34
score: 116.2
NoneNo IPR availableGENE3D2.30.30.140coord: 136..224
e-value: 9.5E-40
score: 134.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..553
NoneNo IPR availableCDDcd09509SAM_Polycombcoord: 584..643
e-value: 1.95518E-21
score: 87.92
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 322..419
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 234..345
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 133..257
IPR002515Zinc finger, C2HC-typePFAMPF01530zf-C2HCcoord: 427..454
e-value: 5.3E-10
score: 39.2
IPR002515Zinc finger, C2HC-typePROSITEPS51802ZF_CCHHCcoord: 418..462
score: 13.947
IPR002515Zinc finger, C2HC-typeSUPERFAMILY103637CCHHC domaincoord: 426..462
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 580..644

Blast
[Close]
BLAST of TCONS_00048927-protein vs. Swiss-Prot (Human)
Match: LMBL3 (Lethal(3)malignant brain tumor-like protein 3 OS=Homo sapiens GN=L3MBTL3 PE=1 SV=2)

HSP 1 Score: 396.741 bits (1018), Expect = 2.351e-128
Identity = 228/659 (34.60%), Postives = 351/659 (53.26%), Query Frame = 0 
Query:   17 GRFCSQRCVGAYASKRRTQLIQQQLESGERPPTKQTNKKSGVKKKKTESKDGTPSSPSLN--------KNKKQIKQEIKDDSILYFQTV--GHHTGFCWETYLQITATKSVPVEAFFKEYDEQEILPQSTTNQFEQGMKLECIDPKHQSIICCCTVVEVQGARLRLNFDGWPANYDFWINSNSFFLHPCGWCSKNQQKLQPPKDIDPKDFEWSTYLMKTQSKAAPANLFFD-TPPVSRHAFRISMKLEAIDRKNPDLVCVASVANTIGDQILIHFDEWDDLYDYWCREDNPYIHPMGWCQKNQIALV-PPTDEMVGKFVWKDYLNDSDCIAAPDEVFKEPKKLLFVIGDKMEVIDPRNPTLCRVATVNRAEDFKVQIHFDGWPSMYDWWFDFDSMDLHPVGWCQKTGHVLEPPPSGQDATSP-----CGIQGCRGVGHIKGAKYTTHHTSFGCPYTSQNIHRTTSPVVDRLVMDSEEVFAGSTPSNKSNENSPTSTVFP-DSTTNYKNMVKSKKAKDKSNKGMNRKRKRRGSDEVSSSTNFLHEEQITKHEYSPMDIPKKIRST---HIPAGLYGRNTYFERKSQAIP------------WNTQEVGEFLSRI-GYAEYVPIFKDNQIDGQALLLLSQADLVHHLNLKLGPALKIYSEI 641
            G +CSQ C      K + +    + ++ E  P     KK  +  K    +DG      +         +  ++ +++ + DS +  Q +       +CW +YL+     +VP + F     E +  P +  N F+ GMKLE +DP+HQS+ C  TV EV G R++L+FDG+   YDFW+N+++  +HP GWC K   KL PPK    ++F W TYL   +++AAP +LF +    V    FR+ MKLEA+D+KNP  +CVA+V + + ++ L+HFD WD+ YDYWC   +P+IHP+GWC++++  L+ PP    V  F W  YL +++ + AP   FK      F    K+EV+D RNP   RVATV   +D +V++HFDGW + YD+W D DS D+HPVGWC KTGH L+PP S  +         C   GC+G+GH K A++   H++  CPY+  N+++      DR+            P   S E  P S  FP +  T+      S + +D+    +    + R   E+ +S    HE +  + E  P     + RS       + +      +E++S+ +P            W+T EV EF+  + G  E+  +FKD QIDG+A LL++Q D+V  +++KLGPALKI++ I
Sbjct:  136 GNYCSQNCARHIKDKDQKEERDVEEDNEEEDPKCSRKKKPKLSLKADTKEDGEERDDEMENKQDVRILRGSQRARRKRRGDSAVLKQGLPPKGKKAWCWASYLEEEKAVAVPAKLF----KEHQSFPYNK-NGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYKEEEFNWQTYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAVDKKNPSFICVATVTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPVGWCKEHRRTLITPPGYPNVKHFSWDKYLEETNSLPAPARAFKVKPPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPVGWCSKTGHPLQPPLSPLELMEASEHGGCSTPGCKGIGHFKRARHLGPHSAANCPYSEINLNK------DRIF-----------PDRLSGEMPPASPSFPRNKRTDANESSSSPEIRDQHADDVKEDFEERTESEMRTS----HEARGAREE--PTVQQAQRRSAVFLSFKSPIPCLPLRWEQQSKLLPTVAGIPASKVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIFNSI 766
The following BLAST results are available for this feature:
BLAST of TCONS_00048927-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LMBL32.351e-12834.60Lethal(3)malignant brain tumor-like protein 3 OS=H... [more]
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