TCONS_00045821-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045821-protein
Unique NameTCONS_00045821-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length637

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045821-protein ID=TCONS_00045821-protein|Name=TCONS_00045821-protein|organism=Clytia hemisphaerica|type=polypeptide|length=637bp
MSRITPQESYNLAKHYRQDTSSRMTQALPDDLIQDLKEQFQEFDKDGNGF
INAKELGDAFAACGNTVPGYKLREIISQVDKDKNGKVSFDEFIEIYKQTT
SKGVFGEWKSSVTKKQGINVLESSEASASGTTHSASEAELIAFTDWINTQ
LKTDPDCAKYIPLNKQNMTEALKDGIILCKMINLSAPKTIDERAINKTKL
SAFRVQENNILVINSASSIGCTVVNVHAEDLGKGKQHLLLGLLWQIIRIG
LFANITLQSNPNIAVLLEEGETIEDLLKLSPEQLLLRWVNYHLRKSGSHK
RINNFSGDIKDSEAYSILLNQIAPNSGMDSSERMIQSGDNMKRAEMVLKN
ADRINCKKFVSAKDISTGNQKLNLAFVANLFNNYPALDPADMEEVEEFEP
YIETREEKTYRNWMNSLGVDPGVNHLYHDMSDGYILFQLYDQIRKDTVNW
NKVNKPPYKIATAGTMKKIENCNYVVELGKQNNYSLVGIGGQDIHKGTHT
LILALVWQMLRDYTMTVLGKLTESSGAIKDKEIVDWVNHKLTDAGKTSHI
SSFKDPSISSGIAVIDLVDAIYPGSIDYELVTPGETAEDKESNAQYAISM
SRKIGARTYALPEDIVEVKPKMLLTVFASLMTRGLQE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029292XLOC_029292Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045821TCONS_00045821Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR001715CH-domain
IPR018247EF_Hand_1_Ca_BS
IPR001589Actinin_actin-bd_CS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 35..63
e-value: 5.0E-6
score: 36.0
coord: 71..99
e-value: 6.0E-6
score: 35.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 34..97
e-value: 1.7E-12
score: 47.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 71..102
score: 12.868
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 31..66
score: 14.96
IPR002048EF-hand domainCDDcd00051EFhcoord: 35..97
e-value: 1.9939E-16
score: 73.7361
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 529..633
e-value: 5.8E-19
score: 79.0
coord: 281..383
e-value: 3.2E-17
score: 73.2
coord: 139..249
e-value: 8.1E-18
score: 75.2
coord: 406..512
e-value: 1.4E-16
score: 71.0
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 521..633
e-value: 5.3E-22
score: 77.5
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 403..519
e-value: 2.0E-24
score: 85.3
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 127..253
e-value: 9.9E-25
score: 86.4
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 254..381
e-value: 3.5E-21
score: 74.9
IPR001715Calponin homology domainPFAMPF00307CHcoord: 529..633
e-value: 1.6E-18
score: 66.8
coord: 280..385
e-value: 6.1E-19
score: 68.1
coord: 406..511
e-value: 7.8E-16
score: 58.1
coord: 142..249
e-value: 4.2E-21
score: 75.1
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 279..385
score: 16.15
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 137..251
score: 17.746
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 527..635
score: 15.366
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 404..514
score: 15.979
IPR001715Calponin homology domainCDDcd00014CHcoord: 142..251
e-value: 1.38967E-21
score: 89.6775
IPR001715Calponin homology domainCDDcd00014CHcoord: 280..385
e-value: 3.7844E-18
score: 79.6623
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 136..631
NoneNo IPR availableGENE3D1.10.238.10coord: 22..56
e-value: 7.3E-10
score: 38.1
NoneNo IPR availableGENE3D1.10.238.10coord: 57..102
e-value: 9.0E-15
score: 53.8
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 44..56
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 80..92
IPR001589Actinin-type actin-binding domain, conserved sitePROSITEPS00019ACTININ_1coord: 406..415
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 22..98

Blast
[Close]
BLAST of TCONS_00045821-protein vs. Swiss-Prot (Human)
Match: PLST (Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4)

HSP 1 Score: 666.381 bits (1718), Expect = 0.000e+0
Identity = 339/627 (54.07%), Postives = 448/627 (71.45%), Query Frame = 0 
Query:   25 TQALPDDLIQDLKEQFQEFDKDGNGFINAKELGDAFAACGNTVPGYKLREIISQV----DKDKNGKVSFDEFIEIYKQTTSKGVFGEWKSSVTKKQGINVLE-SSEASASGTTHSASEAELIAFTDWINTQLKTDPDCAKYIPLNKQ--NMTEALKDGIILCKMINLSAPKTIDERAINKTKLSAFRVQENNILVINSASSIGCTVVNVHAEDLGKGKQHLLLGLLWQIIRIGLFANITLQSNPNIAVLLEEGETIEDLLKLSPEQLLLRWVNYHLRKSGSHKRINNFSGDIKDSEAYSILLNQIAPNSGMDSSERM------IQSGDNMKRAEMVLKNADRINCKKFVSAKDISTGNQKLNLAFVANLFNNYPALDPADMEEVEEFEPYIETREEKTYRNWMNSLGVDPGVNHLYHDMSDGYILFQLYDQIRKDTVNWNKVNKPPYKIATAGTMKKIENCNYVVELGKQ-NNYSLVGIGGQDIHKGTHTLILALVWQMLRDYTMTVLGKLTESSGAIKDKEIVDWVNHKLTDAGKTSHISSFKDPSISSGIAVIDLVDAIYPGSIDYELVTPGE-TAEDKESNAQYAISMSRKIGARTYALPEDIVEVKPKMLLTVFASLMTRGLQ 636
            T  +  D + +LKE F + D + NGFI   EL + F      +PGYK+REII ++    D++K+GK+SFDEF+ I+++  S  +   ++ ++ +K+GI  L  +SE S+ GT HS SE E  AF +WIN  L+ DPDC   IP+N    ++ +A+ DGI+LCKMINLS P TIDERAINK KL+ F +QEN  L +NSAS+IGC VVN+ AEDL  GK HL+LGLLWQII+IGLFA+I L  N  +A LL +GET+E+L+KLSPE+LLLRW N+HL  SG  K INNFS DIKDS+AY  LLNQIAP    +   R+          D++KRAE +L+ AD++ C++FV+  D+ +GN KLNLAFVANLFN YPAL   + ++++      ETREE+T+RNWMNSLGV+P VNHLY D+ D  ++ QLY++I K  V+W+KVNKPPY       MKK+ENCNY VELGK    +SLVGIGGQD++ G  TL LALVWQ++R YT+ VL  L +   A  D  IV+WVN  L++AGK++ I SFKD +ISS +AV+DL+DAI PG I+Y+LV  G  T +DK +NA+YA+SM+R+IGAR YALPED+VEVKPKM++TVFA LM RG++
Sbjct:    6 TTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMLDGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQK-INNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSLGVNPHVNHLYADLQDALVILQLYERI-KVPVDWSKVNKPPYP-KLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQLMRRYTLNVLEDLGDGQKA-NDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMK 628
The following BLAST results are available for this feature:
BLAST of TCONS_00045821-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLST0.000e+054.07Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4[more]
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