TCONS_00045606-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045606-protein
Unique NameTCONS_00045606-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length216

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045606-protein ID=TCONS_00045606-protein|Name=TCONS_00045606-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
MFSFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNEGQPF
NCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIH
TGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLT
RHTESFCGVMPLKCEECGRRFKYVESLTKHQKTHEAKPFQREKVDLEKLF
AWKQNFNDHQDNKESS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029160XLOC_029160Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045606TCONS_00045606Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 134..154
e-value: 16.0
score: 11.5
coord: 106..128
e-value: 0.001
score: 28.4
coord: 50..72
e-value: 7.6E-4
score: 28.8
coord: 162..184
e-value: 0.0012
score: 28.1
coord: 78..100
e-value: 0.0014
score: 27.9
coord: 21..44
e-value: 0.0056
score: 25.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 52..72
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 164..184
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 78..100
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 23..44
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 108..128
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 134..161
score: 11.884
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 162..189
score: 12.362
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 78..105
score: 16.914
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 21..49
score: 11.655
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 50..77
score: 14.669
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 106..133
score: 15.189
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 100..152
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 1..59
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 143..189
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 58..115
NoneNo IPR availableGENE3D2.30.30.380coord: 41..54
e-value: 9.0E-5
score: 22.1
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 106..128
e-value: 9.7E-5
score: 22.5
coord: 79..100
e-value: 5.6E-5
score: 23.3
coord: 50..72
e-value: 1.4E-4
score: 22.1
coord: 163..184
e-value: 4.8E-5
score: 23.5
NoneNo IPR availableGENE3D3.30.160.60coord: 55..67
e-value: 1.3E-8
score: 34.4
NoneNo IPR availableGENE3D3.30.160.60coord: 147..170
e-value: 1.5E-13
score: 50.4
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 21..44
e-value: 4.5E-4
score: 20.7
NoneNo IPR availableGENE3D3.30.160.60coord: 68..91
e-value: 6.1E-20
score: 70.5
NoneNo IPR availableGENE3D2.20.28.10coord: 171..216
e-value: 3.9E-9
score: 36.1
NoneNo IPR availablePFAMPF16622zf-C2H2_11coord: 134..152
e-value: 2.2E-5
score: 24.0
NoneNo IPR availableGENE3D3.30.160.60coord: 128..146
e-value: 4.4E-10
score: 39.0
NoneNo IPR availableGENE3D3.30.160.60coord: 113..127
e-value: 1.6E-11
score: 43.5
NoneNo IPR availableGENE3D3.30.160.60coord: 92..112
e-value: 1.5E-18
score: 66.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 23..40
e-value: 1.8E-6
score: 27.4
coord: 1..22
e-value: 2.9E-5
score: 23.5

Blast
BLAST of TCONS_00045606-protein vs. Swiss-Prot (Human)
Match: ZN708 (Zinc finger protein 708 OS=Homo sapiens GN=ZNF708 PE=1 SV=5)

HSP 1 Score: 179.104 bits (453), Expect = 9.367e-54
Identity = 97/210 (46.19%), Postives = 129/210 (61.43%), Query Frame = 0
Query:    2 FSFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNEGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIHTGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLTRHTESFCGVMPLKCEECGRRFKYVESLTKHQKTH-EAKPFQREKVDLEKLFAWKQNFNDHQ 210
            F    +LTQH I H+G KP+KCEEC ++F+    L NH I +H   +P+ C+ECGK+F   S LTRH ++H+  +  KCEECGK F    NL +H  +HTGEKP+KC+ECGK+F Q + LT H  +H+  KPYKC ECGK F     LT H     G  P KCEECG+ F    +LTKH+  H E KP++ E  +  K F    +  +H+
Sbjct:  113 FCMLSQLTQHEIIHTGEKPYKCEECGKAFKKSSNLTNHKI-IHTGEKPYKCEECGKAFNQSSTLTRHKIIHTGEKLYKCEECGKAFNRSSNLTKHKIVHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHKRIHTGEKPYKCEECGKAFSVFSTLTKHKIIHTEEKPYKCE--ECGKAFNRSSHLTNHK 319          

HSP 2 Score: 172.555 bits (436), Expect = 2.743e-51
Identity = 87/191 (45.55%), Postives = 122/191 (63.87%), Query Frame = 0
Query:    1 MFSFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNEGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIHTGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLTRHTESFCGVMPLKCEECGRRFKYVESLTKHQKTH-EAKPFQ 190
             F+    LT H + H+G KP+KCEEC ++F     L  H + +H   +P+ C+ECGK+F   S LT+H ++H++ +P KCEECGK F    N   H +IHTGEKP+KC+ECGKSF   + LT H  +H+  KPYKC+ECGK F +  +L +H     G  P KCEECG+ F    +LTKH++ H + KP++
Sbjct:  308 AFNRSSHLTNHKVIHTGEKPYKCEECGKAFTKSSTLTYHKV-IHTGKKPYKCEECGKAFSIFSILTKHKVIHTEDKPYKCEECGKTFNYSSNFTNHKKIHTGEKPYKCEECGKSFILSSHLTTHKIIHTGEKPYKCKECGKAFNQSSTLMKHKIIHTGEKPYKCEECGKAFNQSPNLTKHKRIHTKEKPYK 497          

HSP 3 Score: 166.392 bits (420), Expect = 5.518e-49
Identity = 87/191 (45.55%), Postives = 117/191 (61.26%), Query Frame = 0
Query:    1 MFSFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNEGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIHTGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLTRHTESFCGVMPLKCEECGRRFKYVESLTKHQKTHEA-KPFQ 190
             F+    LT H   H+G KP+KCEEC ++F  +  L  H I +H E +P+ C+ECGK+F   S LT H ++H+  +P KCEECGK F     L  H  IHTG+KP+KC+ECGK+F   + LT+H  +H+E KPYKC+ECGK F    + T H +   G  P KCEECG+ F     LT H+  H   KP++
Sbjct:  252 AFTLSSHLTTHKRIHTGEKPYKCEECGKAFSVFSTLTKHKI-IHTEEKPYKCEECGKAFNRSSHLTNHKVIHTGEKPYKCEECGKAFTKSSTLTYHKVIHTGKKPYKCEECGKAFSIFSILTKHKVIHTEDKPYKCEECGKTFNYSSNFTNHKKIHTGEKPYKCEECGKSFILSSHLTTHKIIHTGEKPYK 441          

HSP 4 Score: 163.696 bits (413), Expect = 6.208e-48
Identity = 89/211 (42.18%), Postives = 124/211 (58.77%), Query Frame = 0
Query:    1 MFSFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNEGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIHTGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLTRHTESFCGVMPLKCEECGRRFKYVESLTKHQKTHEA-KPFQREKVDLEKLFAWKQNFNDHQ 210
             F     LT H   H+G KP+KC EC ++F     L  H  ++H   +P+ C+ECGK+F   S LT+H ++H++ +P KCEECGK F    +L  H  IHTGEKP+KC+ECGK+F + + LT H  +H+  KPYKC+ECGK F+    LT+H        P KCEECG+ F Y  + T H+K H   KP++ E  +  K F    +   H+
Sbjct:  224 AFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHK-RIHTGEKPYKCEECGKAFSVFSTLTKHKIIHTEEKPYKCEECGKAFNRSSHLTNHKVIHTGEKPYKCEECGKAFTKSSTLTYHKVIHTGKKPYKCEECGKAFSIFSILTKHKVIHTEDKPYKCEECGKTFNYSSNFTNHKKIHTGEKPYKCE--ECGKSFILSSHLTTHK 431          

HSP 5 Score: 163.696 bits (413), Expect = 6.542e-48
Identity = 89/191 (46.60%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    1 MFSFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNEGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIHTGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLTRHTESFCGVMPLKCEECGRRFKYVESLTKHQKTHEA-KPFQ 190
             F+    LT+H I H+G K +KCEEC ++F     L  H I VH   +P+ C+ECGK+F   S LT H  +H+  +P KC ECGK F    +L  H RIHTGEKP+KC+ECGK+F   + LT+H  +H+E KPYKC+ECGK F     LT H     G  P KCEECG+ F    +LT H+  H   KP++
Sbjct:  168 AFNQSSTLTRHKIIHTGEKLYKCEECGKAFNRSSNLTKHKI-VHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHKRIHTGEKPYKCEECGKAFSVFSTLTKHKIIHTEEKPYKCEECGKAFNRSSHLTNHKVIHTGEKPYKCEECGKAFTKSSTLTYHKVIHTGKKPYK 357          

HSP 6 Score: 160.229 bits (404), Expect = 1.289e-46
Identity = 88/202 (43.56%), Postives = 121/202 (59.90%), Query Frame = 0
Query:   10 QHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNEGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIHTGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLTRHTESFCGVMPLKCEECGRRFKYVESLTKHQKTHEA-KPFQREKVDLEKLFAWKQNFNDHQ 210
            +H I+H+G  PFKC+EC +SF     L  H I +H   +P+ C+ECGK+F   S LT H ++H+  +P KCEECGK F     L  H  IHTGEK +KC+ECGK+F + + LT+H  VH+  KPYKC+ECGK F +  +LT H +   G  P KC ECG+ F     LT H++ H   KP++ E  +  K F+       H+
Sbjct:   93 RHKIRHTGKNPFKCKECGKSFCMLSQLTQHEI-IHTGEKPYKCEECGKAFKKSSNLTNHKIIHTGEKPYKCEECGKAFNQSSTLTRHKIIHTGEKLYKCEECGKAFNRSSNLTKHKIVHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHKRIHTGEKPYKCE--ECGKAFSVFSTLTKHK 291          

HSP 7 Score: 152.91 bits (385), Expect = 8.081e-44
Identity = 83/173 (47.98%), Postives = 109/173 (63.01%), Query Frame = 0
Query:   19 KPFKCEECDESFQSYYFLKNHLIKVHNEGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIHTGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLTRHTESFCGVMPLKCEECGRRFKYVESLTKHQKTHEA-KPFQ 190
            K  +C++  + F  Y   K H I+ H    PF CKECGKSF   S LT+H ++H+  +P KCEECGK F+   NL  H  IHTGEKP+KC+ECGK+F Q + LT+H  +H+  K YKC+ECGK F    +LT+H     G  P KCEECG+ FK   +LT H+K H   KP++
Sbjct:   74 KIVQCDKYVKVFHKYSNAKRHKIR-HTGKNPFKCKECGKSFCMLSQLTQHEIIHTGEKPYKCEECGKAFKKSSNLTNHKIIHTGEKPYKCEECGKAFNQSSTLTRHKIIHTGEKLYKCEECGKAFNRSSNLTKHKIVHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYK 245          

HSP 8 Score: 147.517 bits (371), Expect = 7.374e-42
Identity = 74/165 (44.85%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    1 MFSFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNEGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKEHLRIHTGEKPFKCQECGKSFCQRNKLTQHLNVHSEIKPYKCQECGKCFAEQRSLTRHTESFCGVMPLKCE 165
             F+    LT H + H+G KP+KCEEC ++F  +  L  H + +H E +P+ C+ECGK+F   S  T H  +H+  +P KCEECGK F    +L  H  IHTGEKP+KC+ECGK+F Q + L +H  +H+  KPYKC+ECGK F +  +LT+H        P KC+
Sbjct:  336 AFTKSSTLTYHKVIHTGKKPYKCEECGKAFSIFSILTKHKV-IHTEDKPYKCEECGKTFNYSSNFTNHKKIHTGEKPYKCEECGKSFILSSHLTTHKIIHTGEKPYKCKECGKAFNQSSTLMKHKIIHTGEKPYKCEECGKAFNQSPNLTKHKRIHTKEKPYKCK 499          
The following BLAST results are available for this feature:
BLAST of TCONS_00045606-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7089.367e-5446.19Zinc finger protein 708 OS=Homo sapiens GN=ZNF708 ... [more]
back to top