TCONS_00045405-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045405-protein
Unique NameTCONS_00045405-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length111

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045405-protein ID=TCONS_00045405-protein|Name=TCONS_00045405-protein|organism=Clytia hemisphaerica|type=polypeptide|length=111bp
SDINECEDEKMNVCNKDRGQCTNIEGAFKCHCLYPFIGDGINCDKMQETQ
YNVMMSFAGQIWNDQMLDESSEQFQNMAQIIQTQVYFNLKNLTHELSDLL
HSLRDMVCVSF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028985XLOC_028985Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045405TCONS_00045405Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR000082SEA_dom
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR013032EGF-like_CS
IPR000742EGF-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 2..44
e-value: 0.0016
score: 24.3
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 2..36
e-value: 8.3E-7
score: 29.0
IPR000082SEA domainGENE3D3.30.70.960coord: 46..108
e-value: 8.7E-5
score: 22.1
NoneNo IPR availableGENE3D2.10.25.10coord: 1..45
e-value: 2.1E-8
score: 33.6
NoneNo IPR availableCDDcd00054EGF_CAcoord: 2..39
e-value: 0.00140001
score: 31.8382
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 2..53
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 21..32
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 30..43
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 2..44
score: 11.118

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045405-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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