TCONS_00044056-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044056-protein
Unique NameTCONS_00044056-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length474

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044056-protein ID=TCONS_00044056-protein|Name=TCONS_00044056-protein|organism=Clytia hemisphaerica|type=polypeptide|length=474bp
TLIFKRRFEYLLDEYYFSDVKVNWFEAERLCIARGGTLATILSQEEDNFM
LDQLTKRKPSNERTINYWLDGVKRNMKYVWNDGSEMIYKNLGGGRADESS
YTEGCVLVMYGPGFLVPEPYSWLKVSCTNDGYPIQYVCKGKNLNDSPSIT
TAATTTPTPKPLQSLVTWGSNEYYFSDVKVNWFEAERLCIARGGTLATIL
SQEEDNFMLDQLTKRKPSNERTISYWLDGVKRNMKYVWNDGSEMIYKNLG
GGRADESSYTEGCVLVMYGPGFLVPEPYSWLKVSCTNDGYPIQYVCKGKN
LNDSPTITTTTTVAPTTPSESLPSLVTWGAMQYFFSDEKLNWSESQQKCT
DLGGTLATIFSQDEDDFIRGQLRDRKSPSDRSINYWLDGVKKDMKYVWND
GLEMIYTNLRSGRTNENSFKEGCVSVGYSPTGTIPVYSWWTNDCADKRFP
YQYICKGEDLEKPSKSAVLKFLES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027708XLOC_027708Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044056TCONS_00044056Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 1..139
e-value: 9.1E-14
score: 61.7
coord: 321..456
e-value: 6.0E-17
score: 72.3
coord: 161..297
e-value: 7.7E-16
score: 68.6
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 21..139
e-value: 4.2E-10
score: 40.2
coord: 179..297
e-value: 4.0E-10
score: 40.3
coord: 338..456
e-value: 4.5E-12
score: 46.6
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 168..285
score: 14.157
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 328..448
score: 13.824
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 10..127
score: 13.978
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 7..145
e-value: 2.2E-20
score: 72.5
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 300..462
e-value: 2.0E-23
score: 82.5
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 146..299
e-value: 6.1E-22
score: 77.6
NoneNo IPR availableCDDcd00037CLECTcoord: 173..297
e-value: 4.11817E-15
score: 70.7265
NoneNo IPR availableCDDcd00037CLECTcoord: 333..456
e-value: 8.05438E-18
score: 78.4305
NoneNo IPR availableCDDcd00037CLECTcoord: 15..139
e-value: 4.11817E-15
score: 70.7265
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 328..456
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 165..297
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 15..139

Blast
BLAST of TCONS_00044056-protein vs. Swiss-Prot (Human)
Match: MRC1 (Macrophage mannose receptor 1 OS=Homo sapiens GN=MRC1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.124e-27
Identity = 118/456 (25.88%), Postives = 193/456 (42.32%), Query Frame = 0
Query:   21 KVNWFEAERLCIARGGTLATILSQEEDNFMLDQLTKRKPSNERTINYWLDGV--KRNMKYVWNDGSEMIYKNLGGGRADESSYTEGCVLVMYGPGFLVPEP-YSWLKVSCTNDGYPIQYVCKGKNLNDSPSITTAATTTPTPKPLQSLVTWGSNEYYFSDVKVNWFEAERLCIARGGTLATILSQEEDNFMLDQLTKRKPSNERTISYWLDG-VKRNMKYVWNDGSEMIYKNLGGGRADESSYTEGCVLVMYGPGFLVPEPYSWLKVSCTNDGYPIQYVCKGKNLNDSPTITTTTTVAPTTPSESLPSLVTWGAMQY---------FFSDEKLNWSESQQKCTDLGGTLATIFSQDEDDFIRGQLRDRKSPSDRSINYW--LDGVKKDMKYVWNDGLEMIYTN----LRSGRTNENSFKEG-CVSVGYSPTGTIPVYSWWTNDCADKRFPYQYICK 456
            K  WFE+   C A GG LA+I ++EE   +   +T     ++    +WL       +  + W+DGS + Y+N   G  +     E C       G L  +P  SW  ++C +    I  + KG+     P   T A     P      V +   +YYFS  K     A   C    G L +I S+ E  F+   + +    N+   +Y++   +  + K+ W DGS++ Y +   G  + ++  E CV +    GF       W  ++C   GYP  ++C+  N     +    TTV PT PS  +PS    G   Y         F  +E+ NW E+++ C   GG L +I ++ E  F+   ++      D + + W  L+ V  +  ++W DG  + YTN       GR +  S+++  CV +    +       W  + C  KR    YIC+
Sbjct:  670 KKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL---FWLGLTYGSPSEGFTWSDGSPVSYENWAYGEPNNYQNVEYC-------GELKGDPTMSWNDINCEHLNNWICQIQKGQTPKPEP---TPAPQDNPPVTEDGWVIYKDYQYYFSKEKETMDNARAFCKRNFGDLVSIQSESEKKFLWKYVNR----NDAQSAYFIGLLISLDKKFAWMDGSKVDYVSWATGEPNFANEDENCVTMYSNSGF-------WNDINC---GYPNAFICQRHN-----SSINATTVMPTMPS--VPSGCKEGWNFYSNKCFKIFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMK------DSTFSAWTGLNDVNSEHTFLWTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAG--KWMDDTCDSKR---GYICQ 1080          

HSP 2 Score: 94.3597 bits (233), Expect = 2.356e-20
Identity = 110/452 (24.34%), Postives = 187/452 (41.37%), Query Frame = 0
Query:   16 YFSDVKVNWFEAERLCIARGGTLATILSQEEDNFMLDQLTKRKPSNERTINYW--LDGVKRNMKYVWNDGSEMIYKNLG----GGRADESSYTEG-CVLVMYGPGFLVPEPYSWLKVSCTNDGYPIQYVCKGKNLNDSPSITTAATTTPTPKPLQSLVTWGSNEYYFSDVKVNWFEAERLCIARGGTLATILSQEEDNFMLDQLTKRKPSNERTISYWLDGVKRNMKYVWNDGSEMIYKNLGGGRADESSYTEGCVLVMYGPGFLVPEPYSWLKVSCTNDGYPIQYVCKGKNLNDSPTITTTTTVAPTTPSESLPSLVTW-GAMQYFFSDEKLNWSESQQKCTDLGGTLATIFSQDEDDFIRGQLRDRKSPSDRSINYWLDGVKKDMK--YVWNDGLEMIYTNLRSGRTNENSFKEGCVSVGYSPTGTIPVYSWWTN-DCADKRFPYQYICK 456
            +  + + NW EA + CI  GG L +I +++E  F+   +       + T + W  L+ V     ++W DG  + Y N G    GGR    SY +  CV+++ G      E   W+  +C +      Y+C+ ++    PS+T    T  T       V +G + Y     K  W EAE  C      +A+IL    + F   Q+   + SNER +   L+    + +Y W D   + Y N     ADE      CV       +L  + Y W    C    Y   ++CK    +D    T    +    P     + + + G   Y  S    NW ++  +C  +G +L +I S  E  F    L  R  P     N+W+ G+ ++++  ++W +   + + N  +G  + +  +  CV++  S         +W+N  C+  +    YICK
Sbjct:  962 FMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHM------KDSTFSAWTGLNDVNSEHTFLWTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGAS---NEAGKWMDDTCDSKR---GYICQTRS---DPSLTNPPATIQT----DGFVKYGKSSYSLMRQKFQWHEAETYCKLHNSLIASILDPYSNAFAWLQM---ETSNER-VWIALNSNLTDNQYTWTDKWRVRYTNWA---ADEPKLKSACV-------YLDLDGY-WKTAHCNESFY---FLCK---RSDEIPATEPPQLPGRCPESDHTAWIPFHGHCYYIESSYTRNWGQASLECLRMGSSLVSIESAAESSF----LSYRVEPLKSKTNFWI-GLFRNVEGTWLWINNSPVSFVNWNTG--DPSGERNDCVALHASS-------GFWSNIHCSSYK---GYICK 1356          
The following BLAST results are available for this feature:
BLAST of TCONS_00044056-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRC14.124e-2725.88Macrophage mannose receptor 1 OS=Homo sapiens GN=M... [more]
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