TCONS_00027683 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027683
Unique NameTCONS_00027683
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1163

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027683 ID=TCONS_00027683|Name=TCONS_00027683|organism=Clytia hemisphaerica|type=transcript|length=1163bp
TAGAATTCTGATTTTCTTTAAGTGTTAGAAAAAAGCCATGTCCTACCATA
GATTTGACACTAGTGAAACACAAAGTGTTCCCATGCACCATGGAGTACAA
CATCAAAACACAACAATGGTCGTTGCTGCTGGAGGAGCACAACCAGTCCC
TATCATTGTTGCACAACAACCTTACAATCGTTTTGCTGCCAAAGCTCCGG
CAACTAAGAAACTAGGAATATGGATTCTAATGAATGGAATTGTTACTTTC
ATTTTTGGCATTGCCATGATATCGGCAATTGATTATTGGACTTCGTACAC
TGCTAGTGGCCTATGGTCAGGAGTATTTGTGATCATCGCTGGATCACTTT
GTATTGGTGCTGGTGCCAATGAAAACAATACTTGCTTACGAATTGGTGCA
CTGGTGATGAATATCATTGGAATGCTCGCTACCCTAAGTTCTTGTCTTTT
GATGTTTGTCGGATTCGGACTGGGAATGGGATGCGATCGTAGACGATGTT
ACACAAATTATGATGGACGATGGGTTTGCAGCAGAAGTAGTTGCGGCCGC
CATTTTGACGACACTAAAGAAGGCAGTTACATCTCACTTGCTGTAGCTCT
CTTAAATGTTATTGTTTTTGTATTGATGTTGATTGCTTCTGTTTATGCTG
GCTGTGGTTGCTGTTGTCGCCGTAATGGTAACTCAACGCAATCCCAAGGT
AACATCGTAATGGCTCCTACCCAACAGTCTTATGGTGGCCCAGTCGTGGT
TTCCAGCAATCAAGCCTACTCACACCAAGCATACTCGCAACCGCAATCTC
ACACTGGTCAGCCACAGCAATACAGTCAAGCAGCAATGCCATCAGCTAGT
GGTGGTCAAGTCACATATGGTAATGATTATCAGCAACAACCAAGACAAGA
AGAACAAAAAGTTATGCCTCCTCAATACGCTCCACCAGCTTATTAACAAA
ACTAAAGAATGCAACCTGCAGGTTATTATATCAAAATTATACTTTTTTCC
TatgtaagaacaatttaaaacaACAATCAATGTTAAGAATCATTATATAT
TATTAAATAGCCAAGCcttataatttttataaaagatagTATATAGTCTT
GAGGGCCATAGTTGGGATACCGGTAGCGTGGTGGATCGACCAAAACTAAA
GAGGCAGTTTTCG
Run BLAST on NCBI

transcript from alignment at sc0000639:110147..124923+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027683 ID=TCONS_00027683|Name=TCONS_00027683|organism=Clytia hemisphaerica|type=transcript|length=14777bp|location=Sequence derived from alignment at sc0000639:110147..124923+ (Clytia hemisphaerica)
TAGAATTCTGATTTTCTTTAAGTGTTAGAAAAAAGCCATGTCCTACCATA
GATTTGACACTAGTGAAACACAAAGTGTTCCCATGCACCATGGAGTACAA
CATCAAAACACAACAATGGTCGTTGCTGCTGGAGGAGCACAACCAGTCCC
TATCATTGTTGCACAACAACCTTACAATCGTTTTGCTGCCAAAGCTCCGG
CAACTAAGAAACTAGGTATTTATCAACCTGATCCTAGTGTATcctaggct
ttatttacgttactgacgGACGCCATAGAGAACACCCTGTTGTTTGCTTT
TTTCGTAATATCGTAGATCTTTTTGCTTTTATCTGGTTAATGACTTGAAA
AAGTTGACTTATGTATTATACGTTTAACTCGTAGTTTTGGTATGTAAATG
TCCTGggatttatctttttttctgacgttaccCTTTTATTCAAATtgata
tttcacaaaaattaagcATTAACTGACTTACTGGCAGCTCATTTTAGGGT
CATTAAAAAACTTGTAGGTACTTGGATATTGATATTTCGCAAAAACTCGT
AATTATTTTTCGTAGGAATATGGATTCTAATGAATGGAATTGTTACTTTC
ATTTTTGGCATTGCCATGATATCGGCAATTGATTATTGGACTTCGTACAC
TGCTAGTGGCCTATGGTCAGGTACGTTAAACAAtagctctcaaaaaattt
ttgtcaacaaCTTGATATTGAAATCAGTGAGTTTTGTTGAATTGTACGAG
GTCCCTTTTACGGGCAGAATTGATGTTGCACTTTTTGTCATCTCAaaaat
gaagtcgttgcattgtttTTCGCGCGAGTTCTATTTTCTGCCAGTCAAAT
TGTgtcacgcattcgaaagattcgaaaatgttgcaatcaaaacattgaat
tcatttgtgagtttggttttgagaagaaaacattttctaaaacttaaacc
taaaatattgtgatcttattcatattttgaaaagactttgagaaacagaa
agttataaaatttattacatTGAGGTTGTAAGGGGTATGTATGTATGGAA
agaaatggaatgctttgtttgcttcagttttcactaCAGACTTTCCTCAC
TTTCCTcccttcgaaattcagttttcgatgggagcctttatttatctaaa
ctttgtttttattaatggtGATTCATTTTTGGACATCAAAAACTCCCAAT
GATAACCAGTAAGTTTTATTTGTTTTGGAGGTAAAAAATGCTAAAGAGAA
TGAGTAGATATGTGTCGAAATTGCGCTTCCATTGAAACGTGACATTGAcg
tttgaaaaaagatataacttcaaggcaaaaaaatctattaaaattggatt
acaacctgtacttttttatatatcattttttagcattttgtaTCCTCTTT
CACTTGCGATGGGTGGGAAAGTTGTCTAAATATACTTAAATCTCTGTCAT
CATTTTTGTCAttatagtgaggtctgttagcacaaaaatacttcagatgg
tgacaaaagcatgaaatttggcacagatgatccttagagggtctaaaact
taattttaaacagtaacaaaTTTtcccacctggccacctgccagatgacg
tcatcaggtggctgggcaaaaaataattttttgaaaatattcaaaatctg
atgatTTCAGCGGAAAGAACATGAAATactgatgaaaattgaggtataaa
acatgccttgaaaatcttcctatcaaaagttacgaaGGTTggaagttttg
tgatgacgtcatcatcacaagcctttccaggcaaaacctaaaaatcctgt
aataacggaactagttAACCAAATTTGgagttttatacatgaatccatgt
caGAAATCGAAGTTCCTtctgatgcttgggtctaaacGACATATCGTCTA
AAACGACATAAgaaggcttaaaacatccaaaaaaattagctgTGTTGTAC
ACTGTGTTCCTAAAGGGAGGAAGCTGCCTTGATTTGCCTTGTCAAAATCC
AAGTTTTAatactatactatactatactacTGTAGAATTTAAAGCTtcta
attcaatttgaaaatcagaatcagaaaaagaaatgaattttgatatgaat
tcatgtttaaaacataaaatttggtcaatttgttccaaaattacgaggtt
tttaagttttgccttgAAAGGCTTGTGAttacgtcatcacaaaactttca
acctccataacttttgataggaagattttcaaggcatgttttatacctca
atttttatcagcatttcatgctctttctgCTGANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtacaattatac
accgaccagatcaggttttatgacttttttgtgcaggcatataataaaat
ccagctaaaaccctgtaaaatcccaaaatcttaaattttgcataactttt
gatctaggcatccaattgacttcaaactttgacaggttttaggtatcaat
gatagattttgaaaaatattttaaaaattttcaaaaactgctgacgtcat
cataaatgacgtcatttttttttgaaaaaatttactcattttctgcattg
attttaagcctcgattttattagtatattaaaaaccggcaaatatgttaa
agatattctttttggcttttagaaattcaaaacagaattgaaaaatctcc
attcgttcaactttaattgctattttattgaatagtactttttcattggt
cagcgataattgtgaaactttgtgatgacgtcatcacctttatgatgacg
tcatcaacccaaatttttttctatgaactccttttatggtagaggacctt
tgtgcaaaatttcaagtccataccttttctagatcaaaagttatgcaagg
ctggtggaaaacaccccaccttgagaatacaaaatccgaaaaagcctgat
aataatagggtgaaaccatcaaattttgaatattttcaaaagaataattt
tttgtccagccacctgatgacgtcatctggcaggtggccaggtagGAAAA
Ttcggtgttactgtttaaaactaagttttagaccctctaaggatcacctg
tgccaaatttcatgctttaattaccatctgaagtatttttacGTTCTTAT
ATGCTAACAGGCCTCACTATTAACGTCAGAATTTATCAgccttttttttt
ttcgtcagaGTGACAGTGCCTATCTTTAGGACAAAAAAGTCGATGGAAAA
AAGGGCTGGACTTTCTTTCTAGAGGGGTGGGAAGTTGAAAGGTATTAATT
TTGTATCGTTCCTGCTCTCTTAAAGTTTgtcaaattatcaaaaacatata
aaaaagtaACCTTTACATTATcgcttcaaacttttttacaaacttaCAAA
TCTAAGCAAGTTTGGTATTTCTTAAAAGAGGACAGATTCAGtgattcaaa
aatatcaaatttatgtCTTAAAACGTTATACACAGGAAGCAGTGTAATAA
ACAAGGGGAGGGAAAAACTAAGAAATTTGCAACTtctaattttttgacgt
caaaatctaCGCCAAAACCCTGGGGATTTGTTTCATGTCAAAAATTATAA
CGTCAATTCTGCGCGATGGTTTACGTGATACGGTGATGGCGTGATTCCAA
ATTTTATATGATGGCGTGATCATCGATATTTTTTGAGTGAGAAACCAATT
TTAGCAATTTATGTGATCGCGTTGGGTCTCTATTATCCCCAGAAGGGGTA
TCCAGGGCAAATGAATGGCAAGGTTACATGACATTCTCAAGGATGTCTTT
TGGGTCTTTAAAATTAGGATAAGGTTGAGAAAAAGGAATTGTAAATAAGA
TAGGACTGCATAGGAACTTTGGGTTTGTCTTTATCATCGATGTTTTTTCC
TTAGGAGTATTTGTGATCATCGCTGGATCACTTTGTATTGGTGCTGGTGC
CAATGAAAACAATACTTGCTTACGAATTGGTGCACTGGTGATGAATATCA
TTGGAATGCTCGCTACCCTAAGTTCTTGTCTTTTGATGTTTGTCGGATTC
GGGtaaggtttttatttttattaagaAATTTTCTTATTAAGAAACGCAAA
GACTACTTCAGACTACCTACCTTTGCAAATAAATATCCTACATATTACGT
CCGCAGGTTTTATGTATTTCGAAGAGGGCAAAGTATGCAAATAAACAGGA
CCCGTCTGGTTcaatttaaatgaaattttgagagaaaCATGGCTCAAACA
TCTTTACTAGATTTAGGTCAATAGAAGCTACAATGCAGGAGGAAATACAA
AAATTTGGGTATAATTAGGGCAGCATTGACGTCATCACCGATATGAGAAT
GTGCAATTATAGATATTGCTAACATGAATCTACTATTACATTTCGAAAGT
TATTTGTAAGATTTGTCCTCTTAGACTGGGAATGGGATGCGATCGTAGAC
GATGTTACACAAATTATGATGGACGATGGGTTTGCAGCAGAAGTAGTTGC
GGCCGCCATTTTGACGACACTAAAGAAGGCAGTTACATCTCACTTGCTGT
AGCTCTCTTAAATGTTATTGTTTTTGTATTGATGTTGATTGCTTCTGTTT
ATGCTGGCTGTGGTTGCTGTTGTCGCCGTAATGGTAACTCAACGCAATCC
CAAGGTACCgtgttttattattattttgtcgATGGGAACTTCACCAAACA
AACTCGAACCACGTCCCTTAGCTTTTTAATGGTTCTGATAGCGCCAAAAG
CCATCGGTAAACTCAAAAAGGGGTGACTCTTGGTACAAAATTTTTTCAGC
AACCACCTTTCtaccagggatatgttatagcggagctggatgaaggacga
gaattcctttagcggattgcttctttgtattttctattgtaaactgttga
taatagaaatccatctctgtccccttgagtgttctgtttttataagaaaa
atgaagcagacaaagtattcatgcagtacgtttgcacatattatgctatg
atgttcccacttttcatcaaaataatatttgtagaagataccccaaaagc
ttccttgttaaatgaaatctatttttatcagcgtgtgttatgaatttgag
aagctttcatgatttctctttaaaaatttcggatgtaaatattttgacaa
atattgtttcgaTTGACTtggaattttttccataatcagacatacggact
tgctatctgaaaatatcagttagaaagtgagacaccccgcggtgtagcgc
ggtatttcaaatgaaaaagtactatttataatcttagagaagaaacttct
CATAACTTtacaatgaaaacaatgtttctcatttttttaaatcgtcattc
accaatgttttacagacccttttgataattaaaagtttttaatcgtgaac
gataaatgcagcagcatttaaaattcatatcaaattttaatgtcagggac
agagataaaacaaggcttttttaaatgtgcgttatccccTTATACCGAAA
TCGATCTGCTCTTTAGGTTGACAAAACTAATGTATGGTCTTGGAATAATA
TAGAATGTGGCTATTTTGAGCGATTATTGACATAGCAAAAAGCTAAGAGA
TTTTCTTTGCTTGATTATCATTATACTTTTACACTAAAACTTTTCTGAAT
CTTTCGATGTCATATAACAAGTTCCaaaatgttttagattcttcacacta
agatttctaaaaaagtggTCCCTCAACCCTACTATCTAGTATAGGAGTTT
GTTATTGTAAGTTAATGATCAATGGAATAAATTTATATACAGGTAACATC
GTAATGGCTCCTACCCAACAGTCTTATGGTGGCCCAGTCGTGGTTTCCAG
CAATCAAGCCTACTCACACCAAGCATACTCGCAACCGCAATCTCACACTG
GTCAGCCACAGCAATACAGTCAAGCAGCAATGCCATCAGCTAGTGGTGGT
CAAGTCACATATGGTAATGATTATCAGCAACAACCAAGACAAGAAGAACA
AAAATTTATGCCTCCTCAAGATGTACCTCCAGCATATTCAAGAAACTAAC
CACAATTCGATGAATGGAAACCGTGTTTTttagccagaaacagctatttt
gtccagtttttgcgctttttgaagctcaatatctcgagttaggtactgaa
atcacctatacttgcaatatatctctaatcttcattttttgagaGCGTTC
CAAAAAtttacaacaggtctccgttttctcgaactaaaattttcattaat
ttttaaccctatgatttttgcctgagaccgtcatatttgtccgaaaatca
caccaaagtgtccgaaaaaaaattggaaacatcgtaatttcgattccctt
accccttagctttccaaaaatgtataacaagtgctttgatcaaaacattt
gagcgattttacaaaatgccctctactaataCCCCGATCAGAGAAAGAca
agaatttgtttttttctattctTCATCCACGAGAGCCTTCCCCTTCTTAC
CAACTGGCAGACATCAAATTGGGCAAGAGGTTTGTAAACCTAGGCTGGGT
AAATAGTAAATAGAAATTGAAATATGTAGTAAGTagtgttttatttttta
gccATATACtattctttgaaaattattgaaattaatTGTCAGTGCGACTA
AGCAGACGTTCTTAAATAAATCGTGACAACGAgttaataatatttttaag
cGCCTTTAACTTATATTTCACAACGGTTATTGTGCCCTGGTTTGTACAGG
ATAAAAAGCTgacataaaataaatatttgggaccgtgtcagatatcttca
gagccaaACAAAGGGACCCTTAACCAGTGGCACGTCCCCATACTCATGTT
TGCAATCAGACCATAATGTCAATCTGAATGTCTAAGGCACAGGAGACCGA
TTGTATAATTTGACTGTCCTGTCAGCAAATTTAGTGCttacatttcaatt
ttttttcaaaaaggttaaTGCAGCTTTCACGACAGCTTCTTTTCATGAAA
AAGACCTTACGTCTGTTTGACAAATTCATCCACAAATCAATgttcgacaa
aaaactccgaaaaggaaaacaaaaaaaccgTCTACCGCGCATGCCAAAAG
GGAAAAGCTACTGTCAAGCTATAAGCGCCATCGCTTCACGGATAACAAAC
ATCGCGGACACTAATTTGAGACCGGAAAGCAAATTACCCGGGGGGGAgcg
tacttaggcaaatggagggtatggtatgtgccgcccttaagggaaccttt
ttttggatttccaaagtcccgctaagggttggaaaaatcagaaagttaaa
tttcagtcccactaagggtcgaaaaaatagcaaaatttcaactttttacc
aactgaaagatcgaaatttagtcaaaattggtcaaatttgtcccgctaag
ggtcgtaaaattctcaaaattgacctttgttttctcctttttaatcCCGG
TACGAGTCCAAAGTTccaaagtcgggcggcaccccccgtcagctcacAAC
CTTAGTACCTCCCCACAAATTACAAACAAACGCAACAGATTGAGATTACT
GCCCAATATCTATGTGTGCCTCCTCACTCTTTCGTTGCGGTGGCAATTAT
AGTTTTTTGATGAAAACGGATAAGTGAACTTTTCCCAAACCATTTCTAAA
GGTCTAGAACgacttgaaacatttttcatcaaactgaaacaaaaacaaac
tgcAGTTTAATTAACTAGAAAATGTCgatgatttttcaaaacattttttg
tttcagaaatCGATTTGTTTACGATTTCTATTAATCTTTTGAAGTGGAAC
cactacagtatgtggcccccaaaacggcgatcaaatttgaaatttctctc
aaatctagaggaaaagagattttacaaaaatttttactGCATGAAAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNaatcgtttaattctgataaatctacaagtcaga
atcttcattttaatgaaaacctccgttttgggggccgtctccgttttggg
ggccatatactgtagcaACTTTTTTATCAACGTGAAACTTTTCGCGGGTT
TCTGTTTTCAGATGTTTctacacgtgtttttataaggaacacattTATGA
AGAACTTGAGGCTGATAATCGTccgaaaaataaggaattgttaattAGGC
TGAGAATAAGGTAACAAgttaaccctattcaaactaggcttttaggggcg
gttcagaactagggggggggggcttttcctgtaccaccccttaacttttg
atctagtgggtctttttggatgaaatttggcacacaagattcttgtcacg
taaggtaaattttgacaaaaaatctttttgatgacgtcactcataatgcc
caaagtgagcaaaaaccgaaaattttctttgttcttataaaagctattgt
attctaacaaaggctttagaaaaaaattgtctgagtttaaaatgcttatt
ttatcctaaatattcaatattttacggtttaaatgatatatttgacatct
aaaataaatttgtattagaaaagtgtcaatttttgtgacaccttactgtc
agaaatgtcatcatgctcaaggcgaggggtaaattactcgaaaaaatctc
gtacacttcttagaaaaatcacaaaaaaatcacgcaaaaaatcaaaaatc
acaaaaaaatcacaaaatcacaaAANtaattttttgttataaactatcaa
ctcaaggtgatagaaatagaattcaaagattttttgctttttctcatatt
tagaattttcggttttgtcaatgctgattctagggctccacaatactggt
tgaccttcaagatgctttatcttttacccagcctctaaagtcacagatgt
atttgcattttctgaacggcattaggtgtagaaagtttcctataccccgt
tttcataacttatttNaaaaaatcaaaaaatcacaaaaaaatcaaaaaat
cacagaaaaaaataaaaaatcaaaaagaaatcagaaaaaaatcacagaaa
aaaatcaaaaaatcaaaaagaaatcacaaaaaaatcaaaaaatcacaaaa
aaagcaaaaaatcacaaaaaaatcaaacaatcacTTGGAAAAATATCAGC
Aaactaaaaaatcagaaaaaaatcacagaaaaaaatcaaaaaatcaaaaa
gaaatcacaaaaaaatcaaaaaatcacaaaaaaatcacaaaaaaatcaaa
aaatcacaaaaaaatcaaaaaatcacaaaaaaaccaaaaaatcacaaaaa
aatcaaaaaatcacaaaaaaatcacagaaaaataaaaaaatcacaaaaaa
atcacaaaaaaacaaaaaatcacaaaaaaatcaaaaaatcacataaaaat
cacaaaaaaataacaaaaaaataaaaaaatcacagaaaaaagtcaaaaaa
tcaaaaagaaatcacaaaaaaatcacagaaaaaaatcaaaaaatctaaaa
gaaatcacaaaaaaatcaaaaaatcacaaaaaaatcacagaaaagtcaaa
aatcacaaaaaaatcacaaaaaaatcaaaaaatcacaaaaaaatcacaga
aaaatcaaaaaatcacagaaaaatcaaaaaatcacaaaaaaatcccaaaa
aaatcacaaaaaaatcccaaaaaaatcaaaaaatcacagaaaaaatcaaa
aaatcacaaaaaaatcaaaaatcaaaaatcatttcgtacgcttttttcga
agtgatttacccctcggctcaaggtgtgaaaatatttaggtgtcaatttt
tttttttttgaagctaaataaaagttaagaatttacagaaaatttcacgg
caaatgctctattatttcatgaactattaccaatagtttgacccccgaac
agaaaaagcccccccccccctagtccgaatagggttaaggagCAGTAAGA
GTTAAACTTGAACTTGCACCGGTTCACAAAAACCTacgcaaaaaattcaa
aatattatcaaaatattgatGGAACAACACTCAATAGACGTCTTTCCTTT
GTCTTGTAGTCAATTGTTTGTTTAACACAGCATCAAATCAGTCCAAACTT
AGCAGATAAGTAAATAGGGAACTTGATAAGGaactttttagcctgaaaaa
cTTTGGCAAAATAAGTAACTCCAGGCTgggagccaagttaaggttcttta
taaaagaaaaaacgtgtgtTTGATGAAAAACTTTCCCGATTGACCGCAGA
CCTTAAGCCTATTTTTATCAAAGGGAGAGGTGCTTTctagaccaagctat
atccaccataTCTTTGATTGAAGTTTTTGTTGAATTGGTACCTGTAAAGA
AGCCGTTGCATTGTTAAAATATAACGTCTAACGGTGCTATATCATCAATA
GTTttcaaggaaaagtagatctaatGGTCTCGATGCATTTATACCGcgat
tgagtagtgccgccattagggttccacttttcaaaaaactccgatcaaag
attttttatGGGCGGGATTGAGAAACTCGGTCCAGggtatattattatat
tattataaagGTCGGTGCAGAAAAGATCATTAGTCATACTTGCCGTTTGC
TATATACGGTATTCCGAGGTCGCTATTCATTCGGTTCAAAAGATCATTAG
TAAAGTATCAACGttaaaaattacctttttttccttttcttcctCTAATA
AAGTCCATTTTGCTTttagtgtgcactctttttttctttttttctatgtg
AAAACATAATCTAATTATGAGGACATGGTTTCCATATAGTGGGAGAAAGG
GTGTACACTTAAAGTGAATATATTTTAAATCCTTTAATACTGTGGGAAAC
TGAAATTTAAGGATTTTTCTAAACCCACGTCACGTCAACTTCAAATGCTG
CAATTTTCTCGGCTTTGGTTAAATCAAAGTAGATCATGTTTGAGCTCGTT
GGAAAGCTTTCTTATAATCTACCTTTTTAGGGCaacttttttgaataaaa
tacgcaatcaaaatttttggcaGCTGTAAAAATCGTTATTTATTGAAACT
GAGCAGTAATAAAAGATTTAATGGCAAAAATTGGTGTAAATGGAGGAATT
ATGAAGAAACACTCCTGTCTCATAGCCCCGGTTGACCTTTCGAATGGGGA
TAcagataaaatcaattttacagTGGGGATAAAGTTTCAGGGTAATTTTC
GACCGGGgatgatatttttatcaaactttccagtggggctggggtgtCCA
ATATGGTTTGTGACACAAGGTGTGAAGATAGAGTTAATATCTTATTCCTT
TCCTCAGAGATCTTTGCGATCATCGCTGGATCACTTTGTATTGGTGCTGG
TGCCAATGAAAACAATACTTGCTTACGAATTGGTGCACTGGTGATGAATA
TTATTGGAATGCTTGCCACATTCAGCTCTGGTGCTATAATGTTCCTCGGG
TTTGGGTATGTTTCTTCTTTAAATGATATCTCTCGTTAATTATTGAAAAA
CACAAATACAGCGAGACATAGAACGGAGGCCAAGAAGGGACATCGAAACC
TTTTTTTtgccgattttttttcttctttttcttaccgacttttttctttt
tttgcgaactttttttcttttttggcgaactttttctattttttttcttc
aaaaaaaccaaaaaaaccttgGGTTTAGAAATGGTACGGTTTGTTATGTT
TTAGTGTCTAGATTTCAAGATAATTCATATCTAAGGTGGTAAACATGCTG
AAAGACTGCTGACTGAGCAAAAAATaacgataattttcaatatttaacaa
acaaaatatttcgAGATCTACGAAAGTTAAAGAACAATACCAATTTTGGA
TACCACTAaatcagggctatccagctgtcagaatgatttttgaaaatatt
tctaaacttaaaactcaaaaaattaagaacatctgaatgcttcaaaaatt
tttggatgttcttataaaaaacgtgtaaacggTTAGcaaaagtattacga
tagcctttctgcggtTTGGAAGAATTTTCGGGTTGAAATTGTGGTGGGGG
TGTTTATGGGCGttagaaaattctacaacattGGGTTACCTGTAGAAAGT
AATAACATAGCCAACTCAGTttccacatacttttgagacaaaCTTTAATT
TACCTTTGAAtcggtagagcatccagctatgTTGCGCAAAGTCTTTAGTT
CAATCCCCGTTTGGGTCAAATGAAAAACTAGGGTATATGTTTTCACTCAt
cagcttgatgctcagcaattaagattagaattaagaaatattttttttct
tttttgtggactttttttcttttttatggactttttttctttttttgccg
actttttatctttttttggtgactttttttctttttttgtcaactttttt
tctttttttgtcaactttttttctttttctgaaaacttttttttcttttt
ttgcggacctttttctttttttcaaaaaaattttttttttaatttaactt
ttctcTTTTCGAGACTGCTTTCTTTTAGTTGAtgagggcaaatttttgat
attatgctcctaataaaGTGTAGaatattgacaaaaaagaattgacaaga
aaaaattgcccttcgaatctcctgcctGCAGTTTTTGAGAGAATCAATCT
TTAGTTAATCAATAGAACTTATCAAGAGTCCCCCCTTAACTAATGTTTTT
TTCGAGGTcttaaaatcaaatatctgaggctaCTAACGGAAATGGAAGTT
TTTGGcgtttttcgatgacgtcagcattttgctgggagaattttttttag
gaaaaatcttCCTCACAGCAGGCGGCTGGATAGCTCTAATTTATTAGTAT
CCATAATTGGTATTGTTTGTTTTTGactttcgatgtctagatctcgacag
atattttggtttaagtattgaaaattatcgatattttcagCTGAGTCAGC
ATTTTTTCAGTATATATACACCTTACATAGatatgaattatctcgagatt
tAGGCACTAATTCTAAAACacaacaaaccataccatttttaaaCCTGggg
gttttttgaaaaaaagaaaaaaagtccgcgaaaaaaagaaaaatagtttt
caaaaaaagaaaaatagttttcaaaaaaagaaaaaaagttgctttaattt
aaagaaagaaaaaaagtccggcaaaaaaagaaaaaaagttttcaaaaaaa
gaaaaaaagtcgacaaaaaaagaaaaaagtcctcaaatcaaaaaaagaaa
aaaagtcggcaaaaaaagaaaaaaagtcagcaaaaaaaagaaaaaaagtc
gataaaaaagaaaaaaagtcagcaaaaaaagaaaaaaagtcggcaaaaaa
agaaaaaaagtcaacaaaaaagaaagtttggatgtcccttctcggcttcc
gtaTATTTGTCATTGTCCATGCATAATTAAGTCTTAATTCTTTATAATGA
TTGTTCATTTTaaggtaaaaatttgaaatggtccagttttttcgaaattt
accCATTAAGCTGCTTtgtcagtagcgtagacaggaggtgcgcaaaattt
gtgttggagagcagatttttataatgataaagtaattatctttttatatt
ctGAATAGATAATtagagtgtcataaaaatctactctcttacacaaattt
tgcgccacTCCTGTGTACGctactgaaaatttctttgaaatcccCCGGAT
ATTTTAGCTTAAGTcatatatttcatatatatttCATTCAGATTCTTATA
TGTTGGCTGCTTCCCAAGCAGCTTACGGTGGCCCTGTTATGGTATCCAGT
AACCAAACATACTCTCAACACCAAGCCTTCTCACAACACCAAGCTTTTTC
TCAACCACAACCTTACACTGCTCAGCCACAACAATACAGTAAAGCACCAA
TGCCAACATCTAGTGGTGGTCAAGTCACATATGGTAATGATTATCAGCAA
CAACCAAGACAAGAAGAACAAAAAGTTATGCCTCCTCAATACGCTCCACC
AGCTTATTAACAAAACTAAAGAATGCAACCTGCAGGTTATTATATCAAAA
TTATACTTTTTTCCTatgtaagaacaatttaaaacaACAATCAATGTTAA
GAATCATTATATATTATTAAATAGCCAAGCcttataatttttataaaaga
tagTATATAGTCTTGAGGGCCATAGTTGGGATACCGGTAGCGTGGTGGAT
CGACCAAAACTAAAGAGGCAGTTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015620XLOC_015620Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027683-exon-sc0000639-1491911889:110147..110361TCONS_00027683-exon-sc0000639-1491911889:110147..110361Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1510915933:110147..110361TCONS_00027683-exon-sc0000639-1510915933:110147..110361Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1575043694:110147..110361TCONS_00027683-exon-sc0000639-1575043694:110147..110361Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1491911889:110712..110816TCONS_00027683-exon-sc0000639-1491911889:110712..110816Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1510915933:110712..110816TCONS_00027683-exon-sc0000639-1510915933:110712..110816Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1575043694:110712..110816TCONS_00027683-exon-sc0000639-1575043694:110712..110816Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1491911889:114251..114398TCONS_00027683-exon-sc0000639-1491911889:114251..114398Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1510915933:114251..114398TCONS_00027683-exon-sc0000639-1510915933:114251..114398Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1575043694:114251..114398TCONS_00027683-exon-sc0000639-1575043694:114251..114398Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1491911889:114771..115000TCONS_00027683-exon-sc0000639-1491911889:114771..115000Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1510915933:114771..115000TCONS_00027683-exon-sc0000639-1510915933:114771..115000Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1575043694:114771..115000TCONS_00027683-exon-sc0000639-1575043694:114771..115000Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1491911889:116139..116304TCONS_00027683-exon-sc0000639-1491911889:116139..116304Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1510915933:116139..116304TCONS_00027683-exon-sc0000639-1510915933:116139..116304Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1575043694:116139..116304TCONS_00027683-exon-sc0000639-1575043694:116139..116304Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1491911889:124625..124923TCONS_00027683-exon-sc0000639-1491911889:124625..124923Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1510915933:124625..124923TCONS_00027683-exon-sc0000639-1510915933:124625..124923Clytia hemisphaericaexon
TCONS_00027683-exon-sc0000639-1575043694:124625..124923TCONS_00027683-exon-sc0000639-1575043694:124625..124923Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000639supercontigsc0000639:110147..124923 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0403817	0	0	0	0.000346168	0.0079034	0.043407	2.3669e-07	0.333141	16.6279	16.5617	58.2481	51.0021	6.05028	11.5709	54.5931	47.3422	0.630272	0.820703	5.03226	6.09764	4.57776	0.850809	0.691735	3.37278	20.067	20.6037
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027683 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top