TCONS_00043375-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00043375-protein
Unique Name	TCONS_00043375-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	490

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00043375-protein ID=TCONS_00043375-protein|Name=TCONS_00043375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MLEKWLEELPPSEKKLEEESENVIVQKIFIHKHKLEEGINFAKEDLEKSG
GVEMHIPKEAIPGNGTADSIYFVYYKKNKFFNGNKRLEELCINGFTVFKE
RVFTPVVSGEVVGQTTRNLSAPVVLKFRHTEDEAKLRKTACAYWDYEADN
EKGGWSTEGCTVESIANQTITCHCNHLTNFAAMMDVYAETSTICGKHRKI
ISFITVIGCFLSLIGLFLTFLTYFMFRRLLKEMAAKVLIQLCVALFIVVL
TFVTGIEQTDKPVMCMTVAFVLHYFTLVSFFWMLMEASFMYHAFVRVWPP
RQGGDIYKSTVVAWGIPLFIVGITFLTSMDNYGGSHYCHLTGTPLIASYL
APIGLIILINFVIFIFIMMKLDGRPNGNTDQNSLQLATARLRRAFGIMIL
MGLTWAFGFGQLTDARLEFSYLFSVFNASQGFSIFIFYVTAQKRARSQWI
AFFKCDGRSENKRTTDSYFSERRRINTMQFNRLGSSASSV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_027080	XLOC_027080	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00043375	TCONS_00043375	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000832	GPCR_2_secretin-like
IPR000203	GPS
IPR017981	GPCR_2-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity
GO:0004888	transmembrane signaling receptor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway
GO:0007166	cell surface receptor signaling pathway

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity
molecular_function	GO:0004888	transmembrane signaling receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 487..490
None	No IPR available	GENE3D	1.20.1070.10		coord: 184..479 e-value: 1.4E-36 score: 125.4
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 191..466
IPR000832	GPCR, family 2, secretin-like	PRINTS	PR00249	GPCRSECRETIN	coord: 420..441 score: 23.96 coord: 203..227 score: 26.92 coord: 347..372 score: 33.64 coord: 267..290 score: 26.69 coord: 306..331 score: 18.32
IPR000832	GPCR, family 2, secretin-like	PFAM	PF00002	7tm_2	coord: 201..434 e-value: 2.5E-35 score: 121.8
IPR000203	GPS motif	SMART	SM00303	GPS_3	coord: 137..189 e-value: 2.0E-13 score: 60.6
IPR000203	GPS motif	PFAM	PF01825	GPS	coord: 140..181 e-value: 6.5E-15 score: 55.4
IPR000203	GPS motif	PROSITE	PS50221	GPS	coord: 138..189 score: 15.558
IPR017981	GPCR, family 2-like	PROSITE	PS50261	G_PROTEIN_RECEP_F2_4	coord: 201..442 score: 27.735

Blast

[Close]

BLAST of TCONS_00043375-protein vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 7.174e-56
Identity = 142/436 (32.57%), Postives = 218/436 (50.00%), Query Frame = 0

Query:   37 EGINFAKEDLEKSGGVEMHIPKEAIPGNGTADSIYFVYYKKNKFFNGNKRLEELCINGF---TVFKERVFTPVVSGEVVGQTT------RNLSAPVVLKFRHTEDEAKLRKTACAYWDYEADNEKGGWSTEGCTV-ESIANQTITCHCNHLTNFAAMMDVYAETSTICGKHRKIISFITVIGCFLSLIGLFLTFLTYFMFRRLLKEMAAKVLIQLCVALFIVVLTFVTG--IEQTDKPVMCMTVAFVLHYFTLVSFFWMLMEASFMYHAFVRVWPPRQGGDIYKSTVVAWGIPLFIVGITFLTSMDNYG----GSHYCHLTGTPLI-ASYLAPIGLIILINFVIFIFIMMKLDGRPNGNTDQNSLQLATARLRRAFGIMILMGLTWAFGFGQLTDARLEFSYLFSVFNASQGFSIFIFYVTAQKRARSQWIAFFKC 455
            +G+ F+    E+  G +  I    +P  G   SIY       +    N  L+ +  N F   ++FK +  T  ++  VV  +       +NL+ PVV+  +H        +  CA+WD+E +N  GGW++ GC V E+  N TI C C+HLT+F  +MD+    ST+   + +I++ IT  GC +S I L +  +TY  F +L K+  AK+LI LC AL ++ L F+    +    K  +C+T A  LHYF LVSF WM +EA  MY A V+V+       I K  +V WGIP  +V IT     D YG     + +C +    +   S +A   LI L+N  +F  ++++L+        +   ++    L+    +  L+GLTW F F      R  F YLF++FN  QGF IF+F+   ++  R QW     C
Sbjct: 2576 DGMAFSIHSYEE--GTDPEIFLGNVPVGGILASIYLPKSLTERIPLSN--LQTILFNFFGQTSLFKTKNVTKALTTYVVSASISDDMFIQNLADPVVITLQHIGGNQNYGQVHCAFWDFENNNGLGGWNSSGCKVKETNVNYTI-CQCDHLTHFGVLMDL--SRSTVDSVNEQILALITYTGCGISSIFLGVAVVTYIAFHKLRKDYPAKILINLCTALLMLNLVFLINSWLSSFQKVGVCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFNIYIPNYILKFCLVGWGIPAIMVAITVSVKKDLYGTLSPTTPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQLNSV-KSQIQKTRRKMILHDLKGTMSLTFLLGLTWGFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCVMKESVREQWQIHLCC 3003

The following BLAST results are available for this feature:

BLAST of TCONS_00043375-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00043375-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AGRG4	7.174e-56	32.57	Adhesion G-protein coupled receptor G4 OS=Homo sap...	[more]

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TCONS_00043375-protein (polypeptide) - C. hemisphaerica