TCONS_00042165-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042165-protein
Unique NameTCONS_00042165-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042165-protein ID=TCONS_00042165-protein|Name=TCONS_00042165-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
FFKGPGQGGGVIQGSMSETILIAMLAAKHRMLEKHNLNQVDAASKLVAYG
SKQAHSSLEKGARIAGTQLRLLDIDGKHSMRGEVLESAIKEDKAKGLMPY
FVCATLGTTSLCSFDAIDEISAVAKQEGLWVNVDAAYAGAALICPEYRYL
ITNWNGIDSFALSCNKWLMVTADCAVMFVRDSLDLLKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026035XLOC_026035Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042165TCONS_00042165Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002129PyrdxlP-dep_de-COase
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0016831carboxy-lyase activity
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019752 carboxylic acid metabolic process
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002129Pyridoxal phosphate-dependent decarboxylasePFAMPF00282Pyridoxal_deCcoord: 7..186
e-value: 1.1E-57
score: 195.4
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 1..188
e-value: 4.9E-29
score: 100.6
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 2..185

Blast
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BLAST of TCONS_00042165-protein vs. Swiss-Prot (Human)
Match: DDC (Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.888e-55
Identity = 86/185 (46.49%), Postives = 124/185 (67.03%), Query Frame = 0 
Query:    6 GQGGGVIQGSMSETILIAMLAAKHRMLEK-----HNLNQVDAASKLVAYGSKQAHSSLEKGARIAGTQLRLLDIDGKHSMRGEVLESAIKEDKAKGLMPYFVCATLGTTSLCSFDAIDEISAVAKQEGLWVNVDAAYAGAALICPEYRYLITNWNGIDSFALSCNKWLMVTADCAVMFVRDSLDL 185
            G+GGGVIQGS SE  L+A+LAA+ +++ +       L Q     KLVAY S QAHSS+E+   I G +L+ +  DG  +MR   L+ A++ DKA GL+P+F+ ATLGTT+ CSFD + E+  +  +E +W++VDAAYAG+A ICPE+R+L+      DSF  + +KWL+V  DC+ M+V+   DL
Sbjct:  138 GEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEKLVAYSSDQAHSSVERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRTDL 322
The following BLAST results are available for this feature:
BLAST of TCONS_00042165-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDC1.888e-5546.49Aromatic-L-amino-acid decarboxylase OS=Homo sapien... [more]
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