TCONS_00041935-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041935-protein
Unique NameTCONS_00041935-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length683

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041935-protein ID=TCONS_00041935-protein|Name=TCONS_00041935-protein|organism=Clytia hemisphaerica|type=polypeptide|length=683bp
QVNGIIVGYRIYYNVLDCSKAELADCNENTTFVDEVTVPDLLHTISNLKN
YTEYEIQIDLFNSLATGPKSPKIIISTDEDIPESPPTNVEGFTMSTTSVS
IYWDDVPWGTSHGIITGYVCYYRRMNDGPPADELRILMQENQKRKRRSIE
SFEMDDYLTRNQNMSSESTLTLTRQRRALPSRGYLYLEEAQYANASESGM
IIEDLVLYQWYTLRLAAMTSKGPGPTFDLNASCAQAVPVTGPNITIYDKF
SFTELTLNWSTLSYADSQGTVLDYNIIYYPVRRNGIDLAPVDQDVTSLWF
EFPTQGVELNNLEPFVTYAFQSAAQTFAGPGTFSKPFYAETCRCEKNFKA
VYRNHMPYFGIENGEQIGLLKNLVTAATNLCCGNCSNGHGATNIIWEGPM
TSVSELNDAIFDDTDFVLPIETDKINTYYKSRPFVGILDSPGVSVFSLKV
EYLNLTNNMILNGVLILWSFVVIVALIVMALGLIMWIVQCHPLQLNRTNQ
EAFPDTFSHGAGAGLWWAFNTVLRIGYGDIVATGKLGRIFSIPIIAVGIA
ISATLIAGVSSILLAYSVQKTEGSIFSKKVVAMNESYDQLVIKRMAGIIS
ETAGDTVELIEVLRSKRVDRMAVDAIYAAYHSEKMSDPDVIFRGIKESGA
TQGIVFGGRALRLEKCFRKYFHDKKVELIERIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025829XLOC_025829Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041935TCONS_00041935Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 83..224
e-value: 0.0018
score: 27.5
coord: 238..331
e-value: 4.1
score: 14.8
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1..80
score: 11.125
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 85..181
score: 9.76
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 238..344
score: 11.259
IPR003961Fibronectin type IIICDDcd00063FN3coord: 84..130
e-value: 2.95247E-4
score: 38.6315
IPR003961Fibronectin type IIICDDcd00063FN3coord: 3..77
e-value: 1.14492E-5
score: 42.8687
IPR003961Fibronectin type IIICDDcd00063FN3coord: 238..341
e-value: 0.00162829
score: 36.3203
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 2..130
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 195..341
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 234..349
e-value: 1.8E-9
score: 37.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 83..233
e-value: 2.1E-12
score: 46.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..82
e-value: 2.0E-11
score: 43.6
NoneNo IPR availableGENE3D1.10.287.70coord: 464..617
e-value: 3.4E-14
score: 52.0
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 466..570
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 481..563
e-value: 5.3E-8
score: 32.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041935-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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