forkhead box-containing transcription factor FoxB (polypeptide) - C. hemisphaerica

Overview
Nameforkhead box-containing transcription factor FoxB
Unique NameTCONS_00031417-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00031417-protein ID=TCONS_00031417-protein|Name=forkhead box-containing transcription factor FoxB|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MPRPRKSSYGDDKPPYSYVALCAMAIHSSPAKMMTLSQIYKFIMDNFPFY
RKNSTRWQNSLRHNLSFNDCFVKVSKTSEHGGKGNYWTLHQDCTEMFQDG
SFLRRKRRFLSKEDDDELLKPTDNFKDEKCKATKDWETKMERGYSIRPHY
LPINFEKSEKKLIQEHHKKIKTETIIRPKSFSIADILEKEKHDNEELSPS
SYYRRYSPPLQHTSSRVFFPSDKKIVPPISPHERRYHPYSSSCKCCDDYP
SIAANHSTSSARHQRHWSPPAYRRGDSPPPPPLPAYICHEPIPPSRSSIK
EHTFHANYIKCGCHSF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_018078XLOC_018078Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00031417TCONS_00031417Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001766Fork_head_dom
IPR011991WHTH_DNA-bd_dom
IPR030456TF_fork_head_CS_2
IPR018122TF_fork_head_CS_1
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001766Fork head domainPRINTSPR00053FORKHEADcoord: 34..51
score: 56.66
coord: 13..26
score: 67.86
coord: 57..74
score: 77.29
IPR001766Fork head domainSMARTSM00339forkneu4coord: 11..101
e-value: 5.1E-54
score: 195.5
IPR001766Fork head domainPFAMPF00250Forkheadcoord: 13..97
e-value: 2.7E-36
score: 123.6
IPR001766Fork head domainPROSITEPS50039FORK_HEAD_3coord: 13..107
score: 35.664
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 2..100
e-value: 1.5E-37
score: 127.3
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 12..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..277
NoneNo IPR availableCDDcd00059FHcoord: 13..90
e-value: 1.20624E-43
score: 145.004
IPR030456Fork head domain conserved site 2PROSITEPS00658FORK_HEAD_2coord: 57..63
IPR018122Fork head domain conserved site1PROSITEPS00657FORK_HEAD_1coord: 13..26

Blast
[Close]
BLAST of forkhead box-containing transcription factor FoxB vs. Swiss-Prot (Human)
Match: FOXB1 (Forkhead box protein B1 OS=Homo sapiens GN=FOXB1 PE=1 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 3.351e-51
Identity = 75/124 (60.48%), Postives = 97/124 (78.23%), Query Frame = 0 
Query:    1 MPRPRKSSYGDDKPPYSYVALCAMAIHSSPAKMMTLSQIYKFIMDNFPFYRKNSTRWQNSLRHNLSFNDCFVKVSKTSEHGGKGNYWTLHQDCTEMFQDGSFLRRKRRF-LSKEDDDELLKPTD 123
            MPRP +++Y D KPPYSY++L AMAI SSP KM+ LS+IYKFIMD FP+YR+N+ RWQNSLRHNLSFNDCF+K+ +  +  GKG++W LH  C +MF++GSFLRR++RF + K D     KP D
Sbjct:    1 MPRPGRNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVLKSDHLAPSKPAD 124
The following BLAST results are available for this feature:
BLAST of forkhead box-containing transcription factor FoxB vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXB13.351e-5160.48Forkhead box protein B1 OS=Homo sapiens GN=FOXB1 P... [more]
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