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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027086 ID=TCONS_00027086|Name=TCONS_00027086|organism=Clytia hemisphaerica|type=transcript|length=2258bp
attggtcaaatttaaaaagtgataactcaaattttaagttagcatatcta
ctttctaaatatctaaactccaagcactttgggacatttgttcggcctca
agacgtcgagaaacgtctgaactttttcgtgggtcacccggtatttaAGA
ATTATCTCTGTGTCTTTCATTAGAGATTTtataaagcaaaacaaaataaa
atgacTTTAACAAGAGTTTTTGTAGTTACTGGAGCAAACAAAGGTATTGG
AAAATCCATTGTTAAATTGCTACTAcaagataaagaagaaaaaattgtcT
ATCTTACTGCAAGAAGTGAAGAACTTGGACAAAAAGCTGTAAAAGAGCTT
GAACAAAATGGtttgaaaccaaaatttcatcaatTGGACCTCACTGATCA
ACACAGTATTGAAAGCTTGCGTGATTATTTGCAAAAGGAGCATGCTGGAC
TTGATGTTCTGGTCAATAATGCTGGAATGGCATACAAAGGATCAAGTACA
GTTCCTTTTGCTGAACAAGCAGAAGTGACAAATAACTGTAATTTCTTTGG
AACATTGAATGTCTGTGATGCATTGTTCCCACTTCTACGCAAGAATGCCA
GAGTTGTTCATGTCAGCAGTATGGCCAGTGAATATGCCTacaaaaagctc
tctcctgaaATGAAGCAGAAATTTACTGATGAAAACCTATCCATCGAGGG
ATTAAAGGAGCTGATCAATACCTTTGTTCAATCTGCCAAGGATAACCAAG
CTACTGAAAGAGGTTTCCCTCAAAGTGCTTATGGTATGTCAAAACTCGGT
GAAACAGTAATGACAATGATCCAACAAAAACACTTTGATGCTACACAGCC
TGAAAAGAACATCCTGATCAATTCTTGTTGTCCTGGCCTGGTTGATACTG
ATATGACAGGTGGAAAATATCCAAATCCATTACCAGTTGACGAAGGGGCT
GACACACCAACATTCCTTGCTCTTATACCAGTTGACGCCAAAGAACCAAG
AGGGAAATTCTGTAAATTGCgaaattaaagaaaaactaTTATCATGTCAT
CTTCACCGAGGGTTTTTGTAGTAACTGGTGCGAATAAAGGTATCGGAAAA
TCAATAGTCAAACGATTATTACaagataaagaagaaaagaCTGTCTATCT
CACTGCAAGAAATGAAGAGCTTGGATTACAAACAGTCAAAGAATTTGAAC
AAAATGGTTTGAAACCAAGATTTCATCAACTGGATATTACCGATCAAAAC
AGTATTGGTAGATTACATGATTATTTGAAAAGTGAGCATGGTGGACTTAA
TGTATTGGTTAATAATGCTGGTGTCGCCTTTAGAGGAGATTCCCCTTTAC
ATGGTGCAAAGACCACTGTCGGCTGTAATTATTTTGGATTGATGAatatt
tttaattcgttttttccCTTGTTGAAACAGAACGGAGTTGTTGTTAATAT
TTCCAGTGTTTCGAGTGTCCATGCGTACAAACGGTTGTCGGATGGTTTGA
AACGAAGGTTCAGTGATTCTGGGTTGACTGTAGATGcACTGAGCATTCTC
ATGAACGAGTTTATTACCGCAACTGAAGACCAGGACACTTTCGAAGCCAC
TGGATGGCCAACAAGTGCATATGGAGTTTCCAAAATGGGTGTCTCTTTTC
TTACACAACTTCAACAAAAAAGCTTTGATGCTGAAGAACCAAATCGAAAT
ATAAAAGTTAACTCGTGTTGTCCAGGTCTTGTGGAGACGGACATGACTCG
AGGAAAACATGAAAAGAGCTGGTACCAGACTCCAGAAGAGGGAGCTGACA
CTCCAGTCTATTTATCACTGTTACAGGCTAATGATGATTCGATCAAAGGA
TGTTTTTGTCAGAAACGAAAACCGACTACATACCCACCACAAGAAACAGC
AAACAGTtgaatgtgatttttttatcaagTTTGACCAAGTTTCCATATGT
TGATCATAATAAAACTTTCAACAAATATTATTGACTGATTTTCAAGCAAT
GGAAATACATAAATCTTGAACTTCTTTATccgatttttcttttatttttt
aactgtTTCATGTAACCAAAAATCAAGGAACctaaattaatttaattttt
ttaattaattgcatttaaaaaattgatatgacttttgttgaaattttatt
caacattttttatacaaactgcataataattttaatttattgctTGAATC
TTGTCGGAATTTTAAATGTCTGTCATGAAATATATTGAACATTAACTGGG
TATTAAAT Run BLAST on NCBI protein sequence of TCONS_00027086-protein >TCONS_00027086-protein ID=TCONS_00027086-protein|Name=TCONS_00027086-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MSSSPRVFVVTGANKGIGKSIVKRLLQDKEEKTVYLTARNEELGLQTVKE
FEQNGLKPRFHQLDITDQNSIGRLHDYLKSEHGGLNVLVNNAGVAFRGDS
PLHGAKTTVGCNYFGLMNIFNSFFPLLKQNGVVVNISSVSSVHAYKRLSD
GLKRRFSDSGLTVDALSILMNEFITATEDQDTFEATGWPTSAYGVSKMGV
SFLTQLQQKSFDAEEPNRNIKVNSCCPGLVETDMTRGKHEKSWYQTPEEG
ADTPVYLSLLQANDDSIKGCFCQKRKPTTYPPQETANS Run BLAST on NCBI transcript from alignment at sc0000606:179303..185344+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027086 ID=TCONS_00027086|Name=TCONS_00027086|organism=Clytia hemisphaerica|type=transcript|length=6042bp|location=Sequence derived from alignment at sc0000606:179303..185344+ (Clytia hemisphaerica)
attggtcaaatttaaaaagtgataactcaaattttaagttagcatatcta
ctttctaaatatctaaactccaagcactttgggacatttgttcggcctca
agacgtcgagaaacgtctgaactttttcgtgggtcacccggtatttaAGA
ATTATCTCTGTGTCTTTCATTAGAGATTTtataaagcaaaacaaaataaa
atgacTTTAACAAGAGTTTTTGTAGTTACTGGAGCAAACAAAGGTATTGG
AAAATCCATTGTTAAATTGCTACTAcaagataaagaagaaaaaattgtcT
ATCTTACTGCAAGAAGTGAAGAACTTGGACAAAAAGCTGTAAAAGAGCTT
GAACAAAATGGtttgaaaccaaaatttcatcaatTGGACCTCACTGATCA
ACACAGTATTGAAAGCTTGCGTGATTATTTGCAAAAGGAGCATGCTGGAC
TTGATGTTCTGGTCAATAATGCTGGAATGGCATACAAAGGATCAAGTACA
GTTCCTTTTGCTGAACAAGCAGAAGTGACAAATAACTGTAATTTCTTTGG
AACATTGAATGTCTGTGATGCATTGTTCCCACTTCTACGCAAGAATGCCA
GAGTTGTTCATGTCAGCAGTATGGCCAGTGAATATGCCTacaaaaagctc
tctcctgaaATGAAGCAGAAATTTACTGATGAAAACCTATCCATCGAGGG
TAAGATAGTCAAAAACAATGCTTGTTTTGAAAGAGGActtcttattattt
ataatCAAACACATCAAATGTTTTAGTTTTGGCTTTACAGCTCTAGTTAT
AAAAATCTGTcctaaatttattttattctttttttatagcaatatatttc
gcaggtctattgacctctatttTTAAATAGCCGCAATAAaagatttttag
ctttttacAGTGTTCTATTACACTTTCAAAATACTTGAAAAACTCAATTA
ACAATTACCCAAACTATTTTNTCTATTACACTTGAAAAACTCAATATTGA
TCCTGAATAAGATTGGTTGTCCTAttaatataccgggtgcgccacaaaaa
agattctctctttgaaactaattttctcgaaatctaaaaatttcaaaaga
accaatcctattttattagaaagaagaaagataaatttaaattttgatgg
gtcatttattaaattcgtttcattagatcaaaagttatgctcaattgaat
aaaaaagttactttcagaaagtgctcgaaaacgtttaaaaatcgacctat
caaattttaattttggcctACATGATGAGGATCATTTTTCAGTAATCAaa
tacataaattttgaaactcaagggtcaaaagggtttaaatttttcatcaa
aatcaatttaatttacttttactgACATTTTCCTCAGCTTTTTGGTTTTA
GACTGGATTAAGtttatgtaaggctggatgtacctcgCAATCCATATTTT
Ctaaatgtatttttatgaatttcaccaaattttttggctattttggacaa
atttcctcattttattgaaattcaaccatcttttatataacaaaaggtca
ttgaGACaggtaattatcatttttaataactgaaatgaaaatattgatgt
atcatgtaattatgcttttTATGCTTCTTCGAttggtcgatttttaacgt
ttttgagcactttcagaaagtaacttttttattcaattgaccATAACCTT
TGATCTAATGGAgcgaatttgataaatgacccctgaaaatttaagttttt
cttcattctttccaatggaataggaatggttcttttagtttttttagata
tcaagaaaattagttttaaagagagaaacctttttgtggcgcacccggta
ttttaATTGATACTATTAATTTAGTAAGCAACCTTTAATAAAGtacaaaa
aattgttaaaaacttcTTTTGATAACTAGATATTATCTTTGATTATTAAC
TTTAGGATTAAAGGAGCTGATCAATACCTTTGTTCAATCTGCCAAGGATA
ACCAAGCTACTGAAAGAGGTTTCCCTCAAAGTGCTTATGGTATGTCAAAA
CTCGGTGAAACAGTAATGACAATGATCCAACAAAAACACTTTGATGCTAC
ACAGCCTGAAAAGAACATCCTGATCAATTCTTGTTGTCCTGGCCTGGTTG
ATACTGATATGACAGGTGGAAAATATCCAAATCCATTACCAGTTGACGAA
GGGGCTGACACACCAACATTCCTTGCTCTTATACCAGTTGACGCCAAAGA
ACCAAGAGGGAAATTCTGTAAATTGCGTAAGGTTTGCCCATTTCCACCTT
CAAGCTGACTGAATAAATTGTAACCGTGggagttttttttcagaattcaa
ttttttataacTTTGTAAACTCAAAGACAGCACCAATTCATTTCAAAATG
GGAGTTTTTTGCCTTTGTACGTTGTAATTACGCATAAAGGTCATGATTTG
AAGTTAAGGATTATATCAGATAATATCGAAGCATTAGATCCtgatattct
tgaacttttttcattcacataATACTTTAACGTAGAATTCacaatatttt
gtattttttgtaggggcttttttgttttatgtCTACATATCTTATAATAT
TGTATTagttcgttttcaaaatatttttctctaccTTTAAAATAGGCATG
AACCACCACAATTTGTAAATTTCTCACTTCTCgctgttttgaaaaattca
gaagacttttatttcattctttatgattcttttttgtttcaggaaattaa
agaaaaactaTTATCATGTCATCTTCACCGAGGGTTTTTGTAGTAACTGG
TGCGAATAAAGGTATTGGAAAATCAatagtaaaactatttttgcaagata
aagaagaaaagattGTCTATCTCACTGCAAGAAATGAAGAGCTTGGATTA
CAAACAGTCAAAGAATTTGAACAAAATGGTTTGAAACCAAGGTTTCGTCA
ACTAGATATTACGGATCAAAACAGTATTGATAGATTACGTGATCATTTGC
AAAAGGAGCATCATGGCATTGATGTATTGGTTAATAATGCTGGAATAGCA
TATTCTAATGCAAGTACTATACCATTTGGTGAGCAAGCAGACACAACAAC
TAAATGCAATTTCTTTGGAACTTTAAGTGTATGTGAGGCACTGTTCCCAC
TTTTGCGTAGAAATGCTAGAGTGGTTCATGTATCAAGTGGGGCTGGTACC
AGGGGTTATGAGGCCTTGTCAGCGGAGATGAAAGGAAAGTTTAGTGACCC
TAACCTCCCTATTCAaggtaaattatttttatgataATGATATGTCATTT
TTCTTTCTCTGAAGTCATAGTATTTGATGATATTGCATGCAGAAATGTTT
ATCGCTTATTGGGTTTCATTCTTGTTAAATTCTTCCAAATGATGGACTTT
CATGCCAGTGTTTTTGTgttcaaaatttattattttatgcTGCACCCCAT
CTCTGATATGCATTAATTTCTTTTAGATCTGAAAGATTTGATCAATGTAT
TTGTGCAAGCTGCCAGAGACAATCAAGTCACTGAGAAAGGTTTCAAACAG
AATGCATATGGTATTTCCAAACTCGGTCAAATAGTATTGGCTAGCATTCA
ACAAAGACAATTTGACAGTAACAAACCCGAGCAAAATATTCTTGTTAATT
CTTGTACACCAGGGTTTGTAGATACTGACATGACTCAACATATGATTgct
aataataaaaaaacagttGACGAGGGAGCAGATACCCCTGTATATCTTGC
TCTTCTTTCTCCTGATGTAAAAGAACCTAGAGGAAAATTTTTGAGGTCAA
GAGAAGTTGAGGCATTTCCACCAACCAATTGAatgaaaatgttctttatg
aaatGTCAACAAATAGATGCATCTTTTAGCAGACCATTTCATACCATTTC
Ataactaccttattacacgaatattacatttacaaattgaaaaatttcgt
gttaataaaaacccccttgcttaattaaaaccagccattGTTTCCTTGAA
AAACCAGAAAAATTCGTCTTAATTTCAGATCGTGCAattttcaaggccgt
tgaatactacCTGCCTAATTTTTCAATTATGCAATCTTTTCTAGAGATTT
TGGTACGAATCAAAATAGGGTCGCATTTTACTGGAGTTTTAGAGTCATCA
TGAGATTTTATATTGTTAGGAATTACCGATCCTTGTTTTCTGAAAAAAGC
TTCCATTTCTTGTTATTATCTAAAAGTTTTTTAGATATTCCTAAAGTCAT
caacattttccaaatttttgtgttTCAGGCAGATTAAGTTATCATAAGCT
ATAAAAGTATATTCAAATAACTATCATGGATTCCAAACCTAGAGTTTTTG
TTGTAACTGGATCAAACAAAGGTATCGGAAAATCAATAGTCAAACGATTA
TTACaagataaagaagaaaagaCTGTCTATCTCACTGCAAGAAATGAAGA
GCTTGGATTACAAACAGTCAAAGAATTTGAACAAAATGGTTTGAAACCAA
GATTTCATCAACTGGATATTACCGATCAAAACAGTATTGGTAGATTACAT
GATTATTTGAAAAGTGAGCATGGTGGACTTAATGTATTGGTTAATAATGC
TGGTGTCGCCTTTAGAGGAGATTCCCCTTTACATGGTGCAAAGACCACTG
TCGGCTGTAATTATTTTGGATTGATGAatatttttaattcgttttttccC
TTGTTGAAACAGAACGGAGTTGTTGTTAATATTTCCAGTGTTTCGAGTGT
CCATGCGTACAAACGGTTGTCGGATGGTTTGAAACGAAGGTTCAGTGATT
CTGGGTTGACTGTAGATGGTATGAACATTTTTCAAtcgttattttttaat
taatatCATTGCAATGGCTAATTTGAAAAGGCTCTTCACATGTTTTAGTT
CTTTTGTCGACACAACAAAGGAAAGGGGAAAAAAATTGCCGAAAATGGAA
GGATTTTGTCTCTTTGAAATCTCAAATTCGTCCATCTAtttaaagggatt
atcagatgatttttgatatttggcctAGAGATACCTTTCATGGTCCAGAG
AGACACCTCTAAATCTTTTGACCCAATTTCTTTTCAAAGCTGAGATGTTT
Gactttgaaatctctaaaaatgagtctttacacagtctttacgttaaatt
tctattgttttcaagtaaaaatttgaaaattcaaagtcgaatatctcagc
tttggaaaataattgagaGAGGTGTCTCTCCTGACCATAAAAGGTATCTC
TGAGtaagccaaatatcaaaaatcatctgaAACTATCATCCTATACATTT
CCtatgatttttcttttcagcACTGAGCATTCTCATGAACGAGTTTATTA
CCGCAACTGAAGACCAGGACACTTTCGAAGCCACTGGATGGCCAACAAGT
GCATATGGAGTTTCCAAAATGGGTGTCTCTTTTCTTACACAACTTCAACA
AAAAAGCTTTGATGCTGAAGAACCAAATCGAAATATAAAAGTTAACTCGT
GTTGTCCAGGTCTTGTGGAGACGGACATGACTCGAGGAAAACATGAAAAG
AGCTGGTACCAGACTCCAGAAGAGGGAGCTGACACTCCAGTCTATTTATC
ACTGTTACAGGCTAATGATGATTCGATCAAAGGATGTTTTTGTCAGAAAC
GAAAACCGACTACATACCCACCACAAGAAACAGCAAACAGTtgaatgtga
tttttttatcaagTTTGACCAAGTTTCCATATGTTGATCATAATAAAACT
TTCAACAAATATTATTGACTGATTTTCAAGCAATGGAAATACATAAATCT
TGAACTTCTTTATccgatttttcttttattttttaactgtTTCATGTAAC
CAAAAATCAAGGAACctaaattaatttaatttttttaattaattgcattt
aaaaaattgatatgacttttgttgaaattttattcaacattttttataca
aactgcataataattttaatttattgctTGAATCTTGTCGGAATTTTAAA
TGTCTGTCATGAAATATATTGAACATTAACTGGGTATTAAAT Coding sequence (CDS) from alignment at sc0000606:179303..185344+ >TCONS_00027086 ID=TCONS_00027086|Name=TCONS_00027086|organism=Clytia hemisphaerica|type=CDS|length=2601bp|location=Sequence derived from alignment at sc0000606:179303..185344+ (Clytia hemisphaerica)
ATGTCATCTTCACCGAGGGTTTTTGTAGTAACTGGTGCGAATAAAGGTAT
CGGAAAATCAATAGTCAAACGATTATTACaagataaagaagaaaagaCTG
TCTATCTCACTGCAAGAAATGAAGAGCTTGGATTACAAACAGTCAAAGAA
TTTGAACAAAATGGTTTGAAACCAAGATTTCATCAACTGGATATTACCGA
TCAAAACAGTATTGGTAGATTACATGATTATTTGAAAAGTGAGCATGGTG
GACTTAATGTATTGGTTAATAATGCTGGTGTCGCCTTTAGAGGAGATTCC
CCTTTACATGGTGCAAAGACCACTGTCGGCTGTAATTATTTTGGATTGAT
GAatatttttaattcgttttttccCTTGTTGAAACAGAACGGAGTTGTTG
TTAATATTTCCAGTGTTTCGAGTGTCCATGCGTACAAACGGTTGTCGGAT
GGTTTGAAACGAAGGTTCAGTGATTCTGGGTTGACTGTAGATGcACTGAG
CATTCTCATGAACGAGTTTATTACCGCAACTGAAGACCAGGACACTTTCG
AAGCCACTGGATGGCCAACAAGTGCATATGGAGTTTCCAAAATGGGTGTC
TCTTTTCTTACACAACTTCAACAAAAAAGCTTTGATGCTGAAGAACCAAA
TCGAAATATAAAAGTTAACTCGTGTTGTCCAGGTCTTGTGGAGACGGACA
TGACTCGAGGAAAACATGAAAAGAGCTGGTACCAGACTCCAGAAGAGGGA
GCTGACACTCCAGTCTATTTATCACTGTTACAGGCTAATGATGATTCGAT
CAAAGGATGTTTTTGTCAGAAACGAAAACCGACTACATACCCACCACAAG
AAACAGCAAACAGTtgaATGTCATCTTCACCGAGGGTTTTTGTAGTAACT
GGTGCGAATAAAGGTATCGGAAAATCAATAGTCAAACGATTATTACaaga
taaagaagaaaagaCTGTCTATCTCACTGCAAGAAATGAAGAGCTTGGAT
TACAAACAGTCAAAGAATTTGAACAAAATGGTTTGAAACCAAGATTTCAT
CAACTGGATATTACCGATCAAAACAGTATTGGTAGATTACATGATTATTT
GAAAAGTGAGCATGGTGGACTTAATGTATTGGTTAATAATGCTGGTGTCG
CCTTTAGAGGAGATTCCCCTTTACATGGTGCAAAGACCACTGTCGGCTGT
AATTATTTTGGATTGATGAatatttttaattcgttttttccCTTGTTGAA
ACAGAACGGAGTTGTTGTTAATATTTCCAGTGTTTCGAGTGTCCATGCGT
ACAAACGGTTGTCGGATGGTTTGAAACGAAGGTTCAGTGATTCTGGGTTG
ACTGTAGATGcACTGAGCATTCTCATGAACGAGTTTATTACCGCAACTGA
AGACCAGGACACTTTCGAAGCCACTGGATGGCCAACAAGTGCATATGGAG
TTTCCAAAATGGGTGTCTCTTTTCTTACACAACTTCAACAAAAAAGCTTT
GATGCTGAAGAACCAAATCGAAATATAAAAGTTAACTCGTGTTGTCCAGG
TCTTGTGGAGACGGACATGACTCGAGGAAAACATGAAAAGAGCTGGTACC
AGACTCCAGAAGAGGGAGCTGACACTCCAGTCTATTTATCACTGTTACAG
GCTAATGATGATTCGATCAAAGGATGTTTTTGTCAGAAACGAAAACCGAC
TACATACCCACCACAAGAAACAGCAAACAGTtgaATGTCATCTTCACCGA
GGGTTTTTGTAGTAACTGGTGCGAATAAAGGTATCGGAAAATCAATAGTC
AAACGATTATTACaagataaagaagaaaagaCTGTCTATCTCACTGCAAG
AAATGAAGAGCTTGGATTACAAACAGTCAAAGAATTTGAACAAAATGGTT
TGAAACCAAGATTTCATCAACTGGATATTACCGATCAAAACAGTATTGGT
AGATTACATGATTATTTGAAAAGTGAGCATGGTGGACTTAATGTATTGGT
TAATAATGCTGGTGTCGCCTTTAGAGGAGATTCCCCTTTACATGGTGCAA
AGACCACTGTCGGCTGTAATTATTTTGGATTGATGAatatttttaattcg
ttttttccCTTGTTGAAACAGAACGGAGTTGTTGTTAATATTTCCAGTGT
TTCGAGTGTCCATGCGTACAAACGGTTGTCGGATGGTTTGAAACGAAGGT
TCAGTGATTCTGGGTTGACTGTAGATGcACTGAGCATTCTCATGAACGAG
TTTATTACCGCAACTGAAGACCAGGACACTTTCGAAGCCACTGGATGGCC
AACAAGTGCATATGGAGTTTCCAAAATGGGTGTCTCTTTTCTTACACAAC
TTCAACAAAAAAGCTTTGATGCTGAAGAACCAAATCGAAATATAAAAGTT
AACTCGTGTTGTCCAGGTCTTGTGGAGACGGACATGACTCGAGGAAAACA
TGAAAAGAGCTGGTACCAGACTCCAGAAGAGGGAGCTGACACTCCAGTCT
ATTTATCACTGTTACAGGCTAATGATGATTCGATCAAAGGATGTTTTTGT
CAGAAACGAAAACCGACTACATACCCACCACAAGAAACAGCAAACAGTtg
a
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027086-exon-sc0000606-1491911889:179303..180001 | TCONS_00027086-exon-sc0000606-1491911889:179303..180001 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1510915933:179303..180001 | TCONS_00027086-exon-sc0000606-1510915933:179303..180001 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1575043694:179303..180001 | TCONS_00027086-exon-sc0000606-1575043694:179303..180001 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1491911889:181258..181578 | TCONS_00027086-exon-sc0000606-1491911889:181258..181578 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1510915933:181258..181578 | TCONS_00027086-exon-sc0000606-1510915933:181258..181578 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1575043694:181258..181578 | TCONS_00027086-exon-sc0000606-1575043694:181258..181578 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1491911889:182045..182113 | TCONS_00027086-exon-sc0000606-1491911889:182045..182113 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1510915933:182045..182113 | TCONS_00027086-exon-sc0000606-1510915933:182045..182113 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1575043694:182045..182113 | TCONS_00027086-exon-sc0000606-1575043694:182045..182113 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1491911889:183674..184120 | TCONS_00027086-exon-sc0000606-1491911889:183674..184120 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1510915933:183674..184120 | TCONS_00027086-exon-sc0000606-1510915933:183674..184120 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1575043694:183674..184120 | TCONS_00027086-exon-sc0000606-1575043694:183674..184120 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1491911889:184623..185344 | TCONS_00027086-exon-sc0000606-1491911889:184623..185344 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1510915933:184623..185344 | TCONS_00027086-exon-sc0000606-1510915933:184623..185344 | Clytia hemisphaerica | exon |
| TCONS_00027086-exon-sc0000606-1575043694:184623..185344 | TCONS_00027086-exon-sc0000606-1575043694:184623..185344 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000606 | supercontig | sc0000606:179303..185344 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00027086 vs. Swiss-Prot (Human)
Match: CBR1 (Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3) HSP 1 Score: 249.98 bits (637), Expect = 4.319e-76 Identity = 129/265 (48.68%), Postives = 174/265 (65.66%), Query Frame = 3
Query: 216 VFVVTGANKGIGKSIVKLLLQDKEEKIVYLTARSEELGQKAVKELEQNGLKPKFHQLDLTDQHSIESLRDYLQKEHAGLDVLVNNAGMAYKGSSTVPFAEQAEVTNNCNFFGTLNVCDALFPLLRKNARVVHVSSMASEYAYKKLSPEMKQKFTDENLSIEGLKELINTFVQSAKDNQATERGFPQSAYGMSKLGETVMTMIQQKHFDATQPEKNILINSCCPGLVDTDMTGGKYPNPLPVDEGADTPTFLALIPVDAKEPRGKF 1010
V +VTG NKGIG +IV+ L + +V LTAR GQ AV++L+ GL P+FHQLD+ D SI +LRD+L+KE+ GLDVLVNNAG+A+K + PF QAEVT NFFGT +VC L PL++ RVV+VSS+ S A K SPE++QKF E ++ E L L+N FV+ K + G+P SAYG++K+G TV++ I + + IL+N+CCPG V TDM G K +EGA+TP +LAL+P DA+ P G+F
Sbjct: 7 VALVTGGNKGIGLAIVRDLCRLFSGDVV-LTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATK--SPEEGAETPVYLALLPPDAEGPHGQF 268 HSP 2 Score: 202.216 bits (513), Expect = 1.232e-58 Identity = 120/279 (43.01%), Postives = 171/279 (61.29%), Query Frame = 3
Query: 1044 MSSSPRVFVVTGANKGIGKSIVKRLLQDKEEKTVYLTARNEELGLQTVKEFEQNGLKPRFHQLDITDQNSIGRLHDYLKSEHGGLNVLVNNAGVAFR--GDSPLH-GAKTTVGCNYFGLMNIFNSFFPLLKQNGXXXXXXXXXXXHAYKRLSDGLKRRFSDSGLTVDALSILMNEFITATEDQDTFEATGWPTSAYGVSKMGVSFLTQLQQKSFDAEEPNRNIKVNSCCPGLVETDMTRGKHEKSWYQTPEEGADTPVYLSLLQANDDSIKGCFCQKRK 1871
MSS V +VTG NKGIG +IV+ L + V LTAR+ G V++ + GL PRFHQLDI D SI L D+L+ E+GGL+VLVNNAG+AF+ +P H A+ T+ N+FG ++ PL+K G VVN+SS+ SV A K S L+++F +T + L LMN+F+ T+ + + GWP+SAYGV+K+GV+ L+++ + + I +N+CCPG V TDM K KS PEEGA+TPVYL+LL + + G F +++
Sbjct: 1 MSSGIHVALVTGGNKGIGLAIVRDLCR-LFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK-KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKS----PEEGAETPVYLALLPPDAEGPHGQFVSEKR 273
The following BLAST results are available for this feature:
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