TCONS_00025388-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00025388-protein
Unique NameTCONS_00025388-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length878

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00025388-protein ID=TCONS_00025388-protein|Name=TCONS_00025388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=878bp
MKRTEFVVVFLLVILPNFVFLSSTKNDYYRTYESEDDLEKNLLTYALTEL
TPIETETNKSIEFMDIGTIRESYFYHYLRHIFKNISSEERFGFNMIIDGQ
AKSLKKTDIGFFLHDRQKWNGVYPDILIGMLYPRHIRHFITYQTISESIM
FTSVPTGLSIDSFAKQFNIVGTHPSDLYRLEALTSFLKHLKWNFITLITS
VDMEAISKRFLSDKEGDFCFGGVNFIDRSNCDMIQALGEMEEVSVMVLFT
VVEDSRYVLDCMRELGYKDRFQLVFFYSHNTDYNVVHGNEELVDGTFSLR
VFPELFDDFFPEADPDFYAAFRNLKLNGTNDYYLIAYWELRNECYGGSGF
FKPSLFNRKCTFQEPETLQPVESWDAAYNMVTESASMLRLMFRCIYALLE
AFLNDYCDGKTPCTRSTIGPDFKRLFAQKIRDILGEDMTCNQYRKFFGYI
VSNPIKVESRSMYGDVIHVLHPQVVYYWLLHNQTGGLTPHEVLKTANIEA
GRNGDDKIPRFGDKHWYTVPFGNCSHECGYGARKVFPNSGSQPMCCFDCV
PCGKNEISNGSQCFQCAPDERANITTGTCEKLVLRTMQDVHATLSKLIFV
LTTLLVGISVFLVIWIIHKRNGKMFNVSSTGYWFGLILSIICCLASNIVF
IVEPNNTLCVIQTIAIPVTLIYVHSFVLMKAVRLFFSFLGFPRFAGVIST
TAIELIIGLSFPVIGGLIACQQLLLNGIDLMKERVFHKLTTDEEFLVVSC
TNVNPLIVPITGICALVTLVVNFNSRNIPNIYDEPWDLLYFNLFSLVCQI
LYVAVFYAYDYTMAMEYYHEVTCAVFLLAVCFMALANLFCRKIYFTIKGW
EEPYQVRNGITVDRSQSFTAARYQETVN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014257XLOC_014257Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00025388TCONS_00025388Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001828ANF_lig-bd_rcpt
IPR017978GPCR_3_C
IPR011500GPCR_3_9-Cys_dom
IPR028082Peripla_BP_I
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 175..348
e-value: 5.2E-8
score: 32.3
IPR001828Receptor, ligand binding regionPFAMPF01094ANF_receptorcoord: 127..406
e-value: 2.5E-9
score: 36.6
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 608..844
e-value: 6.5E-10
score: 39.1
IPR017978GPCR family 3, C-terminalPROSITEPS50259G_PROTEIN_RECEP_F3_4coord: 594..847
score: 12.98
IPR011500GPCR, family 3, nine cysteines domainPFAMPF07562NCD3Gcoord: 523..570
e-value: 1.5E-9
score: 37.5
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 134..377

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025388-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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