TCONS_00023318-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023318-protein
Unique NameTCONS_00023318-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1942

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023318-protein ID=TCONS_00023318-protein|Name=TCONS_00023318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1942bp
MESSGDEEGSGLLSNFIFGNIDEDGQLETDFIDDDAKKSLSQLANFGIAQ
SLVRDIGSDSSSKQEDVSFNDFQQQKAQNSIDYSGIDELADEVEHEFAKP
LPLNLMSKSSSSSTRSEDDDYDEEGSSSDGKSPGPSGLQQASTSGFNLPS
VAPKAETMASNQETNVDELFSPSSPTPKSVTDTSTEENEGTNQRLSVDDR
RMSVEEEKPPVTGLASLEGKTVSDLFPDFRPGKVLRFSRLFGPKKYVSAQ
WKGLKKKKRKRKLASVDANTSKPTGFELRFGPTPKPEDCQPDETIIHTQP
LPLWAYGEQYQSMLIRPENDDSSQTDDNESPSWLEGPAQYWYTKHQDLIQ
KGKFNYGFKKKTEEQKLEEEKKKQAAETIPADQFNLVCLKQWEDDIIWSS
KDYQPKENSEALRSLAGWIPSLNTRTMKAYLQQCANKNKASAEALASTNI
MKNFEKVLPTLNKDPNSHKVSDWYSIFPIENKELIYGRWEDKIIWDTDAV
DSIPSPQEFRLDPNDDNLILSVPEDKLVKDTGVTEQTPKKEYKSKSRFMN
KKDKHQHEHEEVLTGGKPKNRFNLSNDEYYMPKQDLAENQIQADLSSLCI
QHSTPAVELQRPFFPTYFTPAELRTLHRPPLSKRKLTAKRGLQVIHSCHK
RLKKKAKEREKERQAFGGGEMFFMRQPEDLSGQDGDLVFMEYCEELPPLV
CQAGMNTRIRNYYKRKHGKDSNTPTLEYGEMAFIHPSTFLGQLAPGQVLQ
AIENNLFRAPIYGHKTATSDFLMFKTPQGFNVRKVQDIFTVGQLCPKYEV
HGPNSKRANNHIRDFLQMFIYRLFLKCPDTPRRIKMEDIRKAFPKHSEST
VRKRLKLCADFRRTGVDCNWWVLKSDFRLPSEEEMRAMVTPEQTCAYYQM
LAAEQRLKDAGYGEKSLFAPDDDDNEADAKKVDEEIQTAPWNTTRAYIQA
MKGKCLLQVTGVADPTGCGEGFSYIRIPNKPITKDETEEQKQAKKQKLVT
GTDADLRRLNLKQARLLLKDFGVSQEEIEKLSRWDVIDKVRTMSTAAAKQ
GTTEVAMNKFARGSRFTVAEHQEKYKDECQRIFDLQNRVLSSDAILSSDE
ESSGEEGSDIEDLGKDLESMLSNKKISSEEHEEEERRELQKLLSQDKSEK
DTKVATSTPKLNAAPPEKEDTTPIFEPGVGKRLMIHRTFNEGGREFVRTE
TVKNPNVIEAYLRIVTRDKNYREVFASQDEKHKEDMRRERRRIQEQLRRI
KRNEERERLRQLQENIKSGDSTELPSAEDQAKLDALSDKPTKVMRCGACG
DFGHMKTNKMCPKYTEATNYTSPDDDFNTDEMSQLSSQDNLIKVEGTKIT
LGKALLEAHEDMKRKSLTIRIPKDSVIPVATPPVKKKRRPTTSTQTDADY
LVRHHKSKNRRRTNPVVAFNVVLENIVTKLKEAPDSWAFHAPVSAKLVPD
YYNIVKNPMDLQTIKENINKGIYHTRDDFLEHVSLIMNNCLLYNGQHHPL
TKVAENLVNLAREELKAKEKDLCEIEREINPLLDEDPQVGLTFIFCEVLS
SLKAIPESWPFHQPVPVKIVPDYYTVIKSPMDLETLKQRCQQHLYPNRER
FMSDVTLLYTNSLSYNGAEHAFTKTAEKLTKVCEEHLAQHDEKLSQLEND
LLHGPLDDGSGVNTNPPSVGAMSDIAEEPSEQSMFHYNSDPFNLNSLEAN
QVQAGNEDEFIDVEGDESMLQQYAQQQQQQQQDGLVQPDAGDFSQVFQQI
GEDGDGELAVGGMVEGGGYTAAGMEEYQYTGGAEFDGPENFDDFQSDFFP
TTMEGGESGRPGGGASTAGGNVGNIVDLLLQDLVHSDEDDEDESDDDIPL
DDGDDDIPLDDGEEEDFEMDDDTRDMTRDDDVTRDEEEDQSQQDMDGSNE
QMGDADEENNVSGEQQDESLEQPVLSDEEEDVDFEDVAESGW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013111XLOC_013111Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023318TCONS_00023318Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR009067TAF_II_230-bd
IPR022591TFIID_sub1_DUF3591
IPR018359Bromodomain_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1630..1650
NoneNo IPR availableCOILSCoilCoilcoord: 1117..1149
NoneNo IPR availableCOILSCoilCoilcoord: 1501..1521
NoneNo IPR availableCOILSCoilCoilcoord: 359..379
NoneNo IPR availableCOILSCoilCoilcoord: 1226..1272
NoneNo IPR availablePFAMPF15288zf-CCHC_6coord: 1294..1315
e-value: 1.8E-6
score: 27.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 548..568
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1124..1175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1837..1942
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1793..1821
NoneNo IPR availableCDDcd05511Bromo_TFIIDcoord: 1419..1530
e-value: 1.24079E-43
score: 155.885
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 1586..1604
score: 22.54
coord: 1604..1623
score: 30.54
coord: 1570..1586
score: 53.96
coord: 1556..1569
score: 39.6
IPR001487BromodomainSMARTSM00297bromo_6coord: 1534..1642
e-value: 5.5E-30
score: 115.6
coord: 1412..1520
e-value: 2.8E-29
score: 113.3
IPR001487BromodomainGENE3D1.20.920.10coord: 1542..1651
e-value: 8.5E-31
score: 106.2
IPR001487BromodomainGENE3D1.20.920.10coord: 1409..1527
e-value: 8.1E-32
score: 108.9
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1547..1628
e-value: 3.8E-16
score: 58.8
coord: 1423..1505
e-value: 4.5E-20
score: 71.4
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1553..1623
score: 20.047
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1431..1501
score: 20.268
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 1405..1524
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 1542..1645
IPR009067TAFII-230 TBP-bindingPFAMPF09247TBP-bindingcoord: 5..56
e-value: 9.1E-12
score: 45.0
IPR009067TAFII-230 TBP-bindingGENE3D1.10.1100.10coord: 8..60
e-value: 3.1E-13
score: 49.4
IPR009067TAFII-230 TBP-bindingSUPERFAMILY47055TAF(II)230 TBP-binding fragmentcoord: 9..52
IPR022591Transcription initiation factor TFIID subunit 1, domain of unknown functionPFAMPF12157DUF3591coord: 572..1038
e-value: 1.5E-154
score: 514.8
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 1558..1615
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 1436..1493

Blast
BLAST of TCONS_00023318-protein vs. Swiss-Prot (Human)
Match: TAF1 (Transcription initiation factor TFIID subunit 1 OS=Homo sapiens GN=TAF1 PE=1 SV=2)

HSP 1 Score: 1307.35 bits (3382), Expect = 0.000e+0
Identity = 705/1470 (47.96%), Postives = 951/1470 (64.69%), Query Frame = 0
Query:  221 TVSDLFPDFRPGKVLRFSRLFGPKKYVSAQWKG------------LKKKKRKRKLASVDANTSKPTGFELRFGPTPKPEDCQPDETIIHTQPLPLWAYGEQYQSMLIRPENDDSSQTDDN-ESPSWLEGPAQYWYTKHQDLIQKGKFNYGFK-KKTEEQ-----KLEEEKKK----QAAETIPADQFNLVCLKQWEDDIIWSSKDYQPKENSEALRSLAGWIPSLNTRTMKAYLQQCANKNKASAEALASTNIMKNFEKVLPTLNKDPNSHKVSDWYSIFPIENKELIYGRWEDKIIWDTDAVDSIPSPQEFRLDPNDDNLILSVPEDK--LVKDTGVTEQTPKKEYKSKSRFMNKKDKHQHEHEEVLTGGKPKNRFNLSNDEYYMPKQDLAENQIQADLSSLCIQHSTPAVELQRPFFPTYFTPAELRTLHRPPLSKRKLTA--KRGLQVIHSCHKRLKKKAKEREKERQAFGGGEMFFMRQPEDLSGQDGDLVFMEYCEELPPLVCQAGMNTRIRNYYKRKHGKDSNTPTLEYGEMAFIHPSTFLGQLAPGQVLQAIENNLFRAPIYGHKTATSDFLMFKTPQGFNVRKVQDIFTVGQLCPKYEVHGPNSKRANNHIRDFLQMFIYRLFLKCPDTPRRIKMEDIRKAFPKHSESTVRKRLKLCADFRRTGVDCNWWVLKSDFRLPSEEEMRAMVTPEQTCAYYQMLAAEQRLKDAGYGEKSLFAPDDDDNEADAKKVDEEIQTAPWNTTRAYIQAMKGKCLLQVTGVADPTGCGEGFSYIRIPNKPITKDETEEQKQAKKQKLVTGTDADLRRLNLKQARLLLKDFGVSQEEIEKLSRWDVIDKVRTMSTAAAKQGTTEVAMNKFARGSRFTVAEHQEKYKDECQRIFDLQNRVLSSDAILSSDEESSGEEGSDIEDLGKDLESMLSNKKISSE---EHEEEERRELQKLLSQDKSEKDTKVATSTPKLNAAPPEKEDTTPIFEPGVGKRLMIHRTF-NEGGREFVRTETVKNPNVIEAYLRI-VTRDKNYREVFASQDEKHKEDMRRERRRIQEQLRRIKRNEERERLRQLQENIKSGDSTELPSAEDQAKLDALSDKPTKVMRCGACGDFGHMKTNKMCPKYTEA----TNYTSPDDDFNTDEMSQLSSQDN--LIKVEGTKITLGKALLEAHEDMKRKSLTIRIPKDSVIPVATPPVKKKRRPTTSTQTDADYLVRHHKSKNRRRTNPVVAFNVVLENIVTKLKEAPDSWAFHAPVSAKLVPDYYNIVKNPMDLQTIKENINKGIYHTRDDFLEHVSLIMNNCLLYNGQHHPLTKVAENLVNLAREELKAKEKDLCEIEREINPLLDEDPQVGLTFIFCEVLS-SLKAIPESWPFHQPVPVKIVPDYYTVIKSPMDLETLKQRCQQHLYPNRERFMSDVTLLYTNSLSYNGAEHAFTKTAEKLTKVCEEHLAQHDEKLSQLENDL 1651
            +V++LFP+FRPGKVLRF RLFGP K V + W+             +++++ +    SV++  S+ + +   + P P PE C  D+ I    P+         +S   +   D    TD       W  GPA+ WY           F+YGFK +KTE +     ++ EE +K       + +  + F +V    WEDDIIW  +D + K       SLAGW+PS  TR   AY                  N+ + F     TL+ D        WYSIFPI+N++L+YGRWED IIWD  A+  +  P    LDPND+NLIL +P++K     ++   E   +   K     + K    + E ++ ++  + K+ +NLSNDEYY PKQ      ++       IQHS PAVEL++PFFPT+  P +LR  HRPPL K    A  + G   +    K +KKKAK RE+ERQA GGGEMFFMR P+DL+G+DGDL+  EY EE  PL+ Q GM T+I+NYYKRK GKD   P  +YGE  + H S FLG L PGQ+LQA ENNLFRAPIY HK   +DFL+ +T QG+ +R++ DIF VGQ CP +EV GPNSKRAN HIRDFLQ+FIYRLF K  D PRRI+MEDI+KAFP HSES++RKRLKLCADF+RTG+D NWWVLKSDFRLP+EEE+RAMV+PEQ CAYY M+AAEQRLKDAGYGEKS FAP++++ E    K+D+E++TAPWNTTRA+I AMKGKCLL+VTGVADPTGCGEGFSY++IPNKP  + + +E +  KK   VTGTDADLRRL+LK A+ LL+ FGV +EEI+KLSRW+VID VRTMST  A+ G  E  M+KFARGSRF+VAEHQE+YK+ECQRIFDLQN+VLSS  +LS+D +SS  E SD E++GK++E+ML NKK SS+   E EE+ER+ELQ++L            ++    N    +    T +     G+ L I+RTF +E G+E+VR ETV+ P VI+AY+RI  T+D+ +   FA  DE+H+E+MR+ERRRIQEQLRR+KRN+E+E+L+   E                             ++CGACG  GHM+TNK CP Y +     +N  +  ++   +    +   DN  LIKVEGTKI LGK L+E+ ++++RKSL ++ PK  +      P KKKRR    T    DYL R HKS +RRRT+P+V  + +LE+I+  +++ P+++ FH PV+AK+V DYY I+  PMDLQT++EN+ K +Y +R++F EH+ LI+ N   YNG  H LT++++++++L  E+LK KE  L  +E+ INPLLD+D QV  +FI   +++  + A+P+SWPFH PV  K VPDYY VI +PMDLET+++   +H Y +RE F+ DV L+  NS+ YNG E  +TKTA+++  VC + L ++DE L+QLE D+
Sbjct:  225 SVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEVECSVESEVSQKSLWNYDYAPPPPPEQCLSDDEITMMAPV---------ESKFSQSTGDIDKVTDTKPRVAEWRYGPARLWYDMLGVPEDGSGFDYGFKLRKTEHEPVIKSRMIEEFRKLEENNGTDLLADENFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAY------------------NVQQGFAA---TLDDD------KPWYSIFPIDNEDLVYGRWEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQ----QGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKT--VTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSG--EGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRML--------LAAGSAASGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLK----------------LKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQL------PPKKKRR--VGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDI 1618          
The following BLAST results are available for this feature:
BLAST of TCONS_00023318-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAF10.000e+047.96Transcription initiation factor TFIID subunit 1 OS... [more]
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