TCONS_00023093-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023093-protein
Unique NameTCONS_00023093-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1815

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023093-protein ID=TCONS_00023093-protein|Name=TCONS_00023093-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1815bp
PKQGFITDKYRIRCNNWKNDGEPIKYEFGYFIRKPGMVGLPADTEIKTLQ
ASEQKDLLDQSFPAGEIQIYVRILNEFGQYVILANKELSFINDVPAPTNL
NDLLGAITSDAGSSPDNVTANANATTTAAPETKGVYEDLSDSLGQIQPQD
PTSVNDVVNAAIFKMAVLDATQKQEDAVPTKPPAIDPLTGQSYDDNADKE
QLEEEGKNLRQKHKENVLNMINQTVITKPEEVKAVADVLTETTNTAAELT
EEARETTMNILLNVVEKMDQMKDTIGIKQTQENVQSCLNVVANAVSSELA
SAKVVNVTADNGDDEEGNGDEGQSNGGNTQKTKQTTKTDLKRATKLKESI
DTLANVMNKNMVTGEQAVTFQTNTLTVALVKKEKADLANMTVGDNQAKLP
LHTEDLFGDQEVIGDVSVQNVQFKENIFQDGETSQNVKTGLQSLVLKTEA
QGPITINNTASPITIVIENDENQFDKRNVSTRIPGFLIMEEMKVDPSACK
ITLRFTKEDSVTNLTVLVQYGKPPTKDEYDAKFILTEDFPETNGESTIMN
ITAKYHKMLDARTLLMWNLEELPYGDSNQTKMFMAFSFEGPIPDNQLHSN
PYTKDIRELPQTYNYTLNAFCAECSYWDAKNESWSTEGCTVSGNETTINK
TVCKCNHLTSFGGMFVAPNPLPTPSLALLKEGYVLLVTIASMLFIYVIGL
VFARRIDKADLDKVGCYPLVGNQKSDKYLYQITVNTGTRREAGTTSNIYF
NLSGTQGESGVRLLKDEENRAFIRGSSLTFVMSTEKNLGDLVYLRIWIDN
TGGDWYLRNMEVIDLQSQEDTTFIVGKWFSVEKEEGFLVHNIAAASDSQM
KEFNYLFANHARRQFADTHIWFSVYARPPESSFTRCQRLSVAMSLLFSVM
LANIMFYGAVPAGTPETENNIRGFTFTWPQVMVGVQSALITVPVNILLVF
LFNAIRMKELPVKVIDDIENGSSDDEESDIESVDEEEQEVAEKKKKKRKK
FTLPHWVLYPTWALCILIILGCAFMVVWYGMAFGNAKSLEWLGSVTIGLL
QDILLMQPLKVFVMALVVALFIKKLEKQEMERMEKELDNVKSWFKNPLEV
ADDSIRTSIFDRANTDHLLPPDKENLSVMRQYAYKQRKMKAIVKEIMYYL
IYAVVITLLGYSLRDYNAFYQTRNLETLFKVRSDFLKVVTKDQFWDYVNK
TVINGLYPHKWYDIDDKWKDQEYVHQFPGGLFLDDGVTKILTGARLRQLR
VPPSSCIKAKEIKKDIRQDCLGYYDLLDEQETAYDQNWTIYDTNYRQGKR
LTARTMPWTFQEDGDLDGFPASGEISTYGGGGYVAEIFPKWNNEAIIQNL
KDKLWIDRHTRAVYIEFGAYNAGTNYFNSIVILFEFPPYGGVIQYHYFIT
FRVLPGTNDWSFMILMAEICFLIFTVLFLIREGREMYRDGILKYATQFWN
MIEMLIIVFCFLTIGLTFYKETLRKSIVNRLPDKVPNIYINLQYASYVDL
TLLYSFALICFFILLKFVKLLRFNKRISMLARTLKRAGQDLLIFGFQFAI
VLVAFTFSGTLAFGKDLYGYKDNWSTFASVIRLILGKFDFSEFAQADEVL
GPMWFNLFHIGVNFIVMNMYISILNDALSAEYAELGDRENDFEVVEYMVS
SFKEYLGMASITREKDVFVDDRDGDIVSIAAEEYARDMFEKRHTTHAHSA
QSRSKMSLKSTKSLMSTISLKSKTSENHLIEGDDDDGETTYHYQANDDVI
NIDDSYSSSAEELGQKNGSERELALSTTSFSGFGKYERTETANEEELLAA
EQFMFTLAKVRIYGH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012974XLOC_012974Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023093TCONS_00023093Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003915PKD_2
IPR001024PLAT/LH2_dom
IPR000203GPS
IPR013122PKD1_2_channel
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 980..1000
NoneNo IPR availableCOILSCoilCoilcoord: 239..259
NoneNo IPR availableCOILSCoilCoilcoord: 199..219
NoneNo IPR availableGENE3D1.10.287.70coord: 1264..1633
e-value: 6.7E-10
score: 38.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..206
IPR003915Polycystic kidney disease type 2 proteinPRINTSPR01433POLYCYSTIN2coord: 1449..1469
score: 25.71
coord: 1159..1180
score: 38.18
coord: 1543..1564
score: 33.64
coord: 1604..1625
score: 35.45
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 728..840
e-value: 5.5E-5
score: 26.1
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 730..833
e-value: 3.5E-15
score: 56.5
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 727..853
e-value: 2.2E-28
score: 98.3
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 728..843
score: 32.409
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 729..833
IPR000203GPS motifSMARTSM00303GPS_3coord: 620..669
e-value: 3.1E-6
score: 36.7
IPR000203GPS motifPFAMPF01825GPScoord: 623..661
e-value: 8.9E-11
score: 42.2
IPR000203GPS motifPROSITEPS50221GPScoord: 621..671
score: 13.607
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 1183..1628
e-value: 1.0E-85
score: 287.9

Blast
BLAST of TCONS_00023093-protein vs. Swiss-Prot (Human)
Match: PK1L2 (Polycystic kidney disease protein 1-like 2 OS=Homo sapiens GN=PKD1L2 PE=1 SV=4)

HSP 1 Score: 242.662 bits (618), Expect = 4.114e-64
Identity = 173/666 (25.98%), Postives = 308/666 (46.25%), Query Frame = 0
Query: 1003 LPHWVLYPTWALCILIILGCAFMVVWYGMAFGNAKSLEWLGSVTIGLLQDILLMQPLKVFVMALVVALFIKKLEKQEMERMEKELDNVKSWFKNPLEVADDSIRTSIFDRANTDHLLPPDKENLSVMRQYAYKQRKMKAIVKEIMYYLIYAVVITLLGYSLRDYNAFYQTRNLETLFKVRSDFLKVVTKDQFWDYVNKTVINGLYPHKWYDIDDKWKDQEYVHQFPGGLFLDDGVTKILTGARLRQLRVPPSSCIKAKEIKKDIRQDCLGYYDLLDEQETAYDQNWTIYDTNYRQGKRLTARTMP-WTFQEDGDLDGFPASGEISTYGGGGYVAEIFP-KWNNEAIIQNLKDKLWIDRHTRAVYIEFGAYNAGTNYFNSIVILFEFPPYGGVIQYHYFITFRVLPGTNDWSFMILMAEICFLIFTVLFLIREGREMYRDGILKYATQFWNMIEMLIIVFCFLTIGLTFYKETLRKSIVNRLPDKVPNIYINLQYASYVDLTLLYSFALICFFILLKFVKLLRFNKRISMLARTLKRAGQDLLIFGFQFAIVLVAFTFSGTLAFGKDLYGYKDNWSTFASVIRLILGKFDFSEFAQADEVLGPMWFNLFHIGVNFIVMNMYISILNDALSAE--YAELGDRENDFEVVEYMVSSFKEYLGMASITRE 1664
            LP W +   W L        AF  + YG+ +G A SL WL S+ +  ++ + + QPLKV   A   AL +K+++ +E        D V       L   D          ++ D   PP    +  M+    K++K  A+++EI+ YL +  ++ L+ Y  RD +A++  R+L+  F     F  V+   +F+ + N T+++ LY H                  PG  F+ DG +K++  A++RQ+RV  SSC  A++ +  +   C   Y L  E    Y + W              A T+  W +Q      G+P  G+++ Y GGGYV  +   +  +  I++ L D  W+D  TRAV++E   YNA  N F  + +  E    G    +    + R+ P T+ W   ++ AE+ + +F + +++ +G+ M ++    Y    WN++E+ II+  +  + +   +  L +  + R  +      I+    +  D  L Y  A +     +K   LLR N +++M+   L+RA  D+  F      +L+A++ +  L FG  L  YK  +    +++ L LG F++ E      VLG        + + F+V+N++IS++  A S E  Y +L +   + E+V+ ++     +LG+ S   E
Sbjct: 1817 LPWWCILVGWLLVAATSGVAAFFTMLYGLHYGRASSLRWLISMAVSFVESMFVTQPLKVLGFAAFFALVLKRVDDEE--------DTVAP-LPGHLLGPDPYALFRARRNSSRDVYQPPLTAAIEKMKTTHLKEQKAFALIREILAYLGFLWMLLLVAYGQRDPSAYHLNRHLQHSFT--RGFSGVLGFREFFKWANTTLVSNLYGHP-----------------PG--FITDGNSKLVGSAQIRQVRVQESSCPLAQQPQAYL-NGCRAPYSLDAEDMADYGEGWN-------------ATTLSEWQYQSQDQRQGYPIWGKLTVYRGGGYVVPLGTDRQKHVKILRYLFDNTWLDALTRAVFVESTVYNANVNLFCIVTLTLETSALGTFFTHAALQSLRLYPFTDGWHPFVVAAELIYFLFLLYYMVVQGKRMSKE-TWGYFCSKWNLLELAIILASWSALAVFVKRAVLAERDLQRCRNHREE-GISFSETAAADAALGYIIAFLVLLSTVKLWHLLRLNPKMNMITAALRRAWGDISGFMIVILTMLLAYSIASNLIFGWKLRSYKTLFDAAETMVSLQLGIFNYEEVLDYSPVLGSFLIGSCIVFMTFVVLNLFISVILVAFSEEQKYYQLSE---EGEIVDLLLMKILSFLGIKSKREE 2433          

HSP 2 Score: 213.386 bits (542), Expect = 3.541e-55
Identity = 209/793 (26.36%), Postives = 346/793 (43.63%), Query Frame = 0
Query:  184 AIDPLTGQSYDDNADKEQLEEEGKNLRQKHKENVLNMINQTVITKPEEVKAV---ADVLTETTNTAAELTEEARETTMNILLNVVEKMDQMKDTIGIKQTQENVQSCLNVVANAVSSEL--ASAKVVNVTADNGDDEEGNGDEGQSNGG----NTQKTKQTTKTDLKRATKLKESIDTLANVMNKNMVTGEQAVTFQTNTLTVALVKKEKADLANMTVGDNQAKLPLHTEDLFGDQEVIGDVSVQNVQFKENIFQDGETSQNVKTGLQSLVLKTEAQGPITINNTASPITIVIENDENQFDKRNVSTRIPGFLIMEEMKVDPSACKITLRFTKEDSVTNLTVLVQYGKPPTKDEYDAKFILTEDFPETNGESTIMNITAKYHKMLDARTLLMWNL--EELPYGDSNQTKMFMAFSFEGPIPDNQLHSNPYTKDIRELPQTYNYTLNAFCAECSYWDAKNESWSTEGCTVSGNETTINKTVCKCNHLTSFGGMFV----APNPLPTPSL-ALLKEGYVLLVTIASMLFIYVIGLVFARRIDKADLDKVGCYPLVGNQKSDKYLYQITVNTGTRREAGTTSNIYFNLSGTQGESGVRLLKDEENRAFIRGSSLTFVMSTEKNLGDLVYLRIWIDNTG--GDWYLRNMEVIDLQSQEDTTFIVGKWFSVEKEEGFLVHNIAAASDSQMKEFNYLFANHARRQFADTHIWFSVYARPPESSFTRCQRLSVAMSLLFSVMLANIMFYGAVPAGTPETENNIRGFTFTWPQVMVGVQSALITVPVNILLVFLFNAIRMK 958
            A+  +  Q ++     + L     ++RQK +E+VL  ++  V T  E+V+ V   A+VL E T  + ELT  A+      L +  E +     T+  K   E+ +        A + +L  A   V+  +  N  +E       Q           +  QTT    K    L   + T +  +  N +   Q  ++Q ++L     + + AD A   +    +        L G QE    V ++ + F ++ F    +  +V   +  L + + +   I + N +  I I++     +  +  V        +   +    +   I L +  + +   LT+ + YG  P K  YDA+  L                      M+    L  W L  ++L +G+           +   +P++ L   P  +D+          +  F + C +WD   E+W   GC V G  T+  +T C CNHLT FG  F+    A N   T  L A  ++  V++ T+  +  +YV+ +++ARR D  D  KV    L  N    +Y Y +TV TG RR A T+S +   L G  GE     L D +   F RG+   F++ST   LG+L  LR+W DN+G    WY+  + V DL       F+   W S+   +  L      A++   K+F++LF       F D HIW+S+++R   SSFTR QR+S   SLL   ML +IMF+G VP    E + ++    FTW +VM+G++S+++  P+N+L+V +F   R +
Sbjct:  901 AVSSMLNQEHESQGSGQSLS---IDVRQKVREHVLGSLS-AVTTGLEDVQRVQELAEVLREVTCRSKELTPSAQWEASLALQHASEALL----TVSAKARPEDQRR------QAATRDLFQAVGSVLEASLSNRPEEPAEASSSQIATVLRLLRVMEHVQTTLLLGKLPGGLPAMLATPSISVYTNRI---QPWSWQGSSL-----RPDAADSATFMLPAASS-----LSSLEGGQE---PVDIKIMSFPKSPF-PARSHFDVSGTVGGLRVTSPSGQLIPVKNLSENIEILLPRHSQRHSQPTVLNLTSPEALWVNVTSGEATLGIQLHWRPDIA---LTLSLGYGYHPNKSSYDAQTHLV--------------------PMVAPDELPTWILSPQDLRFGE--------GVYYLTVVPESDLEPAP-GRDL-------TVGITTFLSHCVFWDEVQETWDDSGCQV-GPRTSPYQTHCLCNHLTFFGSTFLVMSNAINIHQTAELFATFEDNPVVVTTVGCLCVVYVLVVIWARRKDAQDQAKVKVTVLEDNDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGEREPHHLADPDTPVFERGAVDAFLLSTLFPLGELRSLRLWHDNSGDRPSWYVSRVLVYDLVMDRKWYFLCNSWLSINVGDCVLDKVFPVATEQDRKQFSHLFFMKTSAGFQDGHIWYSIFSRCARSSFTRVQRVSCCFSLLLCTMLTSIMFWG-VPKDPAEQKMDLGKIEFTWQEVMIGLESSILMFPINLLIVQIFQNTRPR 1621          
The following BLAST results are available for this feature:
BLAST of TCONS_00023093-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PK1L24.114e-6425.98Polycystic kidney disease protein 1-like 2 OS=Homo... [more]
back to top