TCONS_00026955 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026955
Unique NameTCONS_00026955
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1979

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026955 ID=TCONS_00026955|Name=TCONS_00026955|organism=Clytia hemisphaerica|type=transcript|length=1979bp
aaatgcaTGTTGTGCTGAACGAGCAAGCAAGACCAAGGAATGTCGCGTTG
GTAACAGGTAAATCAATATAAAGAAGGGGTTTAATAACATCCAAGAAAAA
AATGGGTCCAAAGCATTCAAGGCATGAGCCTTTAAATGACAAACTTTATT
GTTCAATTGATATGGACATGCAACCTGTGGATCAATTCAAAGTTCTTGGT
TGTGGTCATATCTTTTGTGTTGAATGTCTTGAAGCTTGGAAAGAGCAAAA
ACTGATCAATTGCCCGAAATGTAGATATGAGGAAAAACGTAGTCTTTACG
ATCTCACTGACCCACGTTATTACGAAGGACCCTTATATATTGATCAATCG
CCAGAAGACgaagatattaaggaaatacaAACATTACTTCATGCTCAGAT
GGTCCGAAGAGCAAAAACAATCAATATTTTGCTGGATGCAGCAGATGCAG
TGACACAAATTGAATTAAGTGCAGCAGGCGTGAAGATTGGGGGAGCTGTT
GCGGGTCTTGTGGGTACAGGAATGGTAGTCACAGGGGGTGTCCTTTCTTT
AACCGGAGTTGGAGCAGTTGCTGGTGTCCCACTTGCTATGGCTGGTGCTG
CTGTTGGTGGAACAGGTGGCCTGGTTGTTGGTGGTGGTATTATCGGTGAG
ATGATCTCCAAGAAGCAAGAATTGAAAGGAGCAAATGAGTATTTACAATC
AGATTATTTTCATTCAATGCAATTGAGAATCCTCATTGGAAGAGCAGCTA
GAAGTGAAtcgtttgctgaaaaattgaatattccTCTACAAGATGCACTT
GGCTTTATTGGTCTCGTTGGTCGTACTGCAAAGTTTGGTTTAGCAGCTAC
TAACCTTGCAAGAGCAATTGCAACTGGTCTAGCTAGAGGTGCTGGTACAG
CTGGTCTGCATGTTGCTGGGATCGCTATCGGTGCTGTACTTATACCAATT
GATCTATTCCAAATGATCTCCAACTCGATTAAAATccacaaaaaagaaaa
agctgaAATTgccaaagatttggaaaatattGCTGATGAGCTGAGAACCG
AGCTATTTTCATTGTTGAAAGAACGTCAATACCAATTGGTTGAGTTGGAA
AGATATGATGatgataaacaaaaacattgtttatTACTGGCAGTTGAAGA
ATCTGAACTGGAAATGGTTTCCAAATCCAATCTCTCATTAGCTGAAGTCA
GAAAGGAACATGTTGTGATACTTGATGTTATTGGACCATGTTTAGATGGT
GAACTGTACCAAGAAATGGTAGATAAATGGATCACCAGTAATATTCTTGA
TGAGGATAGTTCTGAAAACGACGAAGATGATGACGACATTGAAGATGGAT
ACCAAATTGTTGGAGAAGATGATATTTTGTTGGAACGTCGCTGCTAAATT
GTTGAATAAAATGTATGCTTTGTCAGTCAAAAATTCATGTTTAATGAGTT
TTAAATGTCATGTTTGAGTGTATTCTGCTTGAGCAATAAGGTTAAAAGTA
AGATAATATGAATCTAAAATATGGAATTGCACGTTGACAAGTTTTTACCA
ATGATAATGAAAAGGTATTGATCAATGGTTTCCCCAGTTTGTTAAGTTGA
GTATGTTATAATTGATGGAATGTAGCTTTATTATTGATATTAAAAGAGAT
ATGTTTATAATAAAGTCGAAAAAACTTGAATGAAAAAGCATAAAGTTGCA
TTTATTGTCTATTCAGGGCTATGATGGTTATGGGAATTTTTACAAACTTT
CCTCTGGGGTTTTCTGTTTTTTCtggttttgacgttttttgtatttgtaa
atattgtagtaaatataaaatttgtaaaatattgtatTGTGGTTATACAg
agatgtttttcattttcttacaaTGGGTATACATTTAATTTccaaatctc
aaaattatttgTGTTTAACTTTGAGTAAACAAACACTATTTGGAATCTCA
ATTTGAAATACTTTTTTAcattaggcgaa
Run BLAST on NCBI

protein sequence of TCONS_00026955-protein

>TCONS_00026955-protein ID=TCONS_00026955-protein|Name=TCONS_00026955-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MGPKHSRHEPLNDKLYCSIDMDMQPVDQFKVLGCGHIFCVECLEAWKEQK
LINCPKCRYEEKRSLYDLTDPRYYEGPLYIDQSPEDEDIKEIQTLLHAQM
VRRAKTINILLDAADAVTQIELSAAGVKIGGAVAGLVGTGMVVTGGVLSL
TGVGAVAGVPLAMAGAAVGGTGGLVVGGGIIGEMISKKQELKGANEYLQS
DYFHSMQLRILIGRAARSESFAEKLNIPLQDALGFIGLVGRTAKFGLAAT
NLARAIATGLARGAGTAGLHVAGIAIGAVLIPIDLFQMISNSIKIHKKEK
AEIAKDLENIADELRTELFSLLKERQYQLVELERYDDDKQKHCLLLAVEE
SELEMVSKSNLSLAEVRKEHVVILDVIGPCLDGELYQEMVDKWITSNILD
EDSSENDEDDDDIEDGYQIVGEDDILLERRC
Run BLAST on NCBI

transcript from alignment at sc0000597:122964..128969+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026955 ID=TCONS_00026955|Name=TCONS_00026955|organism=Clytia hemisphaerica|type=transcript|length=6006bp|location=Sequence derived from alignment at sc0000597:122964..128969+ (Clytia hemisphaerica)
aaatgcaTGTTGTGCTGAACGAGCAAGCAAGACCAAGGAATGTCGCGTTG GTAACAGGTTTAACCCCATTTAATCTGACAGTTTTCCTATTTTTGTGCAG TCCTCACTTATCAAAATTAAATCAGAAATTGTATAAAActgattttgttt attttatgtgTGTTTTATTACAGACATcactttcaaaattatttctcctg aaaagtgaaaatcaagaatgtaaaaaaaaatgtaaaaatgaatattttct GGTTGACCATGTGAGTTTTAATTTCTAGAATAGAAGCAAgctgattttaa ttttggtctGACTACCTTTGTTTGCTGAATACTGCAAAGAAGAAAACTCA AATTTGACACAAACATTCATTGACATGATACTCTACCAACCttcaatagt ttccagttccaaacaTAAACTGCTCTTCCCCACAGGAGCCAAAATTGCCA TTCATACATTATCAGAATTGGGTGGTTTCCCATTTTTGGAGGGAGTGCAC TGcaaagtttttatttataaTGCATCAGTTGGTTATTGTTTTGatactgg agtttttaattataaaGAATGATATTGTAATACTGTAGAAAGGTCTATCA GGAAGATAGGTATTCAAGCTTTATTgtgatgaaaaatatttttagctatc atttctaGCTCAAAATTAACAAGCTAAAATTTATCGCTCATCAGGCAGAT TTTCAGAACCACAAGCAAGCCTTGCATAAAAAGGAATTTAATATGCCCCA TATATAGTAGGTGCCGTAGTTACCTTGAGTTACCTTGAGCTTGTTTCGTA ATATCTTTACGCATCCATCCTGTGAGGACcgatgtaaattttcatattga tgatGCTGTTTGTTTCAGCTCGAGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNGATGTTTTGGATTCCTTTCTTTACTCG TGTGTCATCAGCAAAACTTGCAAGTTCTGCTTTGGTTGTCCCTTCATCAA TGTCTGATATCATGATGATGAAGAATGGCCCAAGAACCGATTCTTGAGGT ACTCCTGATTGAATTTTTGCCTGGTACGACTTTTGACCGTCTTCAAATAC TACTTGGTTTCTGTCTTGAAGAAATGACTTAATCCATTTAAGTAGTTTGT CTGTTATTCCAATAGATTTCAGTTTTGATAGCAGTATCCTGTGGNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgacgggacgctcatta gtaagcgtctatagttgcgagaataggcctctaaagcctcctgcaactca accaaatagaaatagaaatttgttttgtctaagaataattttttttgctt acgcAAGATGaaataattgaaatatttgatcgAAAGTAGAATTACCTTGT GAAAACTGTTAAGAAATCCCCCATATTTTCCTATTCAAGGTAATATGTTT AATTTGTCAAAAGTGAGGCAGGATTTACCCTGTCTCCCCATAGTACATAT ATgagaatttctttctttctcatgTACTATGGTCTCCCTACAGATGTAGA CAGGAGCAAATTGAACAAAAGAGACTTGGAAAAAGTTACATAATCTCTAC CAAAGCTTTTTTGAGCATAAACAGTATTATTTTCTAAAAGCAATTAATGA TTATGCTGAAAGTGGACTACATGTTTATAATTAAATATGCAAatgaaata tatatataatatatttatataatgggcttttccagaaaacatTTGAACAT GAGGGGGGGTATAATAGTTATAACAATTTTCAATGATTTACCCCCAGACA AAGTGACTTTATGCCTCCTGGATGAAGggttttaccccctggacaagcat cagttgaccccgagacaacccaaattacccccagacaaggcaaattttga tgatttttgctACCCCCCCCCTCAACAATATATCCTCACCCACCCACACA ATGtatgaacattttctggaagagcccaacgTGATTATTCGACAATTGTT ATGAATTTACACGAATACAGATAATATAAGTATTTAAGTAAAAGACTGGT ATCAGCtataaaaagaaatgaaaggTTGTGAGTACTTGTAGATCATCCAA AATGATTTTAGCTTGATAGACTACTGTAGGTctaatttaaagcaaaaaag aaacttttagaacaaataccttattacacaaagTGATTCAGCTAGAAGGA ATTTCTGAATCCAttagaaaataaagaaagtagTCTGTTGCTTTTTTCCA TGTTTTCCTACCTATAATAATGATTTTCCAGGTAAATCAATATAAAGAAG GGGTTTAATAACATCCAAGAAAAAAATGGGTCCAAAGCATTCAAGGCATG AGCCTTTAAATGACAAACTTTATTGTTCAATTGATATGGACATGCAACCT GTGGATCAATTCAAAGTTCTTGGTTGTGGTCATATCTTTTGTGTTGAATG TCTTGAAGCTTGGAAAGAGCAAAAACTGATCAATTGCCCGAAATGTAGAT ATGAGGAAAAACGTAGTCTTTACGATCTCACTGACCCACGTTATTACGAA GGACCCTTATATATTGATCAATCGCCAGAAGACgaagatattaaggaaat acaAACATTACTTCATGCTCAGATGGTCCGAAGAGCAAAAACAATCAAGT AAGTTATGTTATTGTCTCAATgatattattttatattttcacaCAATCTT TGCATATATTTTCAGTTAAGATTTATTTTAGTAGTTTCTTGTTAATTAAA AAATGGCTTTTCGGCAGAGATGTTTGAATATAATATTTACAATATTATGT ATGGCTATGATTTTAAAGAAAGGTGATGAGATAGAATCAAATTAACCTCT GTAATTTCAGTATTTTGCTGGATGCAGCAGATGCAGTGACACAAATTGAA TTAAGTGCAGCAGGCGTGAAGATTGGGGGAGCTGTTGCGGGTCTTGTGGG TACAGGAATGGTAGTCACAGGTAGGTTAATGGTCAAACAGAGAAACAAAA CCAAATGTTTGCAGAGACTGAAACTTTCAACAAAGTTATCTTCTAATAAT GAATCAATGAGTTTAACGTTCTTAATAAATTAGTACAACTAAGGATGGAA AACTTGTTTTAAATCattagaaaaaattagtttacTGCTTTTTCAGCTTT TTATGATTATGCCAATTCCAACCTGTCATAAACATTATATAAATCATTTC AACACTTTTAGGGGGTGTCCTTTCTTTAACCGGAGTTGGAGCAGTTGCTG GTGTCCCACTTGCTATGGCTGGTGCTGCTGTTGGTGGAACAGGTGGCCTG GTTGTTGGTGGTGGTATTATCGGTGAGATGATCTCCAAGAAGCAAGAATT GAAAGGAGCAAATGAGTATTTACAATCAGATTATTTTCATTCAATGCAAT TGAGAATCCTCATTGGAAGAGCAGCTAGAAGTGAAtcgtttgctgaaaaa ttgaatattccTCTACAAGATGCACTTGGCTTTATTGGTCTCGTTGGTCG TACTGCAAAGTTTGGTTTAGCAGCTACTAACCTTGCAAGAGCAATTGCAA CTGGTCTAGCTAGAGGTGCTGGTACAGCTGGTCTGCATGTTGCTGGGATC GCTATCGGTGCTGTACTTATACCAATTGATCTATTCCAAATGATCTCCAA CTCGATTAAAATccacaaaaaagaaaaagctgaAATTgccaaagatttgg aaaatattGCTGATGAGCTGAGAACCGAGCTATTTTCATTGTTGAAAGAA CGTCAATACCAATTGGTTGAGTTGGAAAGATATGATGatgataaacaaaa acattgtttatTACTGGCAGTTGAAGAATCTGAACTGGAAATGGTTTCCA AATCCAATCTCTCATTAGCTGAAGTCAGAAAGGAACATGTTGTGATACTT GATGTTATTGGACCATGTTTAGATGGTGAACTGTACCAAGAAATGGTAGA TAAATGGATCACCAGTAATATTCTTGATGAGGATAGTTCTGAAAACGACG AAGATGATGACGACATTGAAGATGGATACCAAATTGTTGGAGAAGATGAT ATTTTGTTGGAACGTCGCTGCTAAATTGTTGAATAAAATGTATGCTTTGT CAGTCAAAAATTCATGTTTAATGAGTTTTAAATGTCATGTTTGAGTGTAT TCTGCTTGAGCAATAAGGTTAAAAGTAAGATAATATGAATCTAAAATATG GAATTGCACGTTGACAAGTTTTTACCAATGATAATGAAAAGGTATTGATC AATGGTTTCCCCAGTTTGTTAAGTTGAGTATGTTATAATTGATGGAATGT AGCTTTATTATTGATATTAAAAGAGATATGTTTATAATAAAGTCGAAAAA ACTTGAATGAAAAAGCATAAAGTTGCATTTATTGTCTATTCAGGGCTATG ATGGTTATGGGAATTTTTACAAACTTTCCTCTGGGGTTTTCTGTTTTTTC tggttttgacgttttttgtatttgtaaatattgtagtaaatataaaattt gtaaaatattgtatTGTGGTTATACAgagatgtttttcattttcttacaa TGGGTATACATTTAATTTccaaatctcaaaattatttgTGTTTAACTTTG AGTAAACAAACACTATTTGGAATCTCAATTTGAAATACTTTTTTAcatta ggcgaa

Coding sequence (CDS) from alignment at sc0000597:122964..128969+

>TCONS_00026955 ID=TCONS_00026955|Name=TCONS_00026955|organism=Clytia hemisphaerica|type=CDS|length=3888bp|location=Sequence derived from alignment at sc0000597:122964..128969+ (Clytia hemisphaerica)
ATGGGTCCAAAGCATTCAAGGCATGAGCCTTTAAATGACAAACTTTATTG
TTCAATTGATATGGACATGCAACCTGTGGATCAATTCAAAGTTCTTGGTT
GTGGTCATATCTTTTGTGTTGAATGTCTTGAAGCTTGGAAAGAGCAAAAA
CTGATCAATTGCCCGAAATGTAGATATGAGGAAAAACGTAGTCTTTACGA
TCTCACTGACCCACGTTATTACGAAGGACCCTTATATATTGATCAATCGC
CAGAAGACgaagatattaaggaaatacaAACATTACTTCATGCTCAGATG
GTCCGAAGAGCAAAAACAATCAATATTTTGCTGGATGCAGCAGATGCAGT
GACACAAATTGAATTAAGTGCAGCAGGCGTGAAGATTGGGGGAGCTGTTG
CGGGTCTTGTGGGTACAGGAATGGTAGTCACAGGGGGTGTCCTTTCTTTA
ACCGGAGTTGGAGCAGTTGCTGGTGTCCCACTTGCTATGGCTGGTGCTGC
TGTTGGTGGAACAGGTGGCCTGGTTGTTGGTGGTGGTATTATCGGTGAGA
TGATCTCCAAGAAGCAAGAATTGAAAGGAGCAAATGAGTATTTACAATCA
GATTATTTTCATTCAATGCAATTGAGAATCCTCATTGGAAGAGCAGCTAG
AAGTGAAtcgtttgctgaaaaattgaatattccTCTACAAGATGCACTTG
GCTTTATTGGTCTCGTTGGTCGTACTGCAAAGTTTGGTTTAGCAGCTACT
AACCTTGCAAGAGCAATTGCAACTGGTCTAGCTAGAGGTGCTGGTACAGC
TGGTCTGCATGTTGCTGGGATCGCTATCGGTGCTGTACTTATACCAATTG
ATCTATTCCAAATGATCTCCAACTCGATTAAAATccacaaaaaagaaaaa
gctgaAATTgccaaagatttggaaaatattGCTGATGAGCTGAGAACCGA
GCTATTTTCATTGTTGAAAGAACGTCAATACCAATTGGTTGAGTTGGAAA
GATATGATGatgataaacaaaaacattgtttatTACTGGCAGTTGAAGAA
TCTGAACTGGAAATGGTTTCCAAATCCAATCTCTCATTAGCTGAAGTCAG
AAAGGAACATGTTGTGATACTTGATGTTATTGGACCATGTTTAGATGGTG
AACTGTACCAAGAAATGGTAGATAAATGGATCACCAGTAATATTCTTGAT
GAGGATAGTTCTGAAAACGACGAAGATGATGACGACATTGAAGATGGATA
CCAAATTGTTGGAGAAGATGATATTTTGTTGGAACGTCGCTGCTAAATGG
GTCCAAAGCATTCAAGGCATGAGCCTTTAAATGACAAACTTTATTGTTCA
ATTGATATGGACATGCAACCTGTGGATCAATTCAAAGTTCTTGGTTGTGG
TCATATCTTTTGTGTTGAATGTCTTGAAGCTTGGAAAGAGCAAAAACTGA
TCAATTGCCCGAAATGTAGATATGAGGAAAAACGTAGTCTTTACGATCTC
ACTGACCCACGTTATTACGAAGGACCCTTATATATTGATCAATCGCCAGA
AGACgaagatattaaggaaatacaAACATTACTTCATGCTCAGATGGTCC
GAAGAGCAAAAACAATCAATATTTTGCTGGATGCAGCAGATGCAGTGACA
CAAATTGAATTAAGTGCAGCAGGCGTGAAGATTGGGGGAGCTGTTGCGGG
TCTTGTGGGTACAGGAATGGTAGTCACAGGGGGTGTCCTTTCTTTAACCG
GAGTTGGAGCAGTTGCTGGTGTCCCACTTGCTATGGCTGGTGCTGCTGTT
GGTGGAACAGGTGGCCTGGTTGTTGGTGGTGGTATTATCGGTGAGATGAT
CTCCAAGAAGCAAGAATTGAAAGGAGCAAATGAGTATTTACAATCAGATT
ATTTTCATTCAATGCAATTGAGAATCCTCATTGGAAGAGCAGCTAGAAGT
GAAtcgtttgctgaaaaattgaatattccTCTACAAGATGCACTTGGCTT
TATTGGTCTCGTTGGTCGTACTGCAAAGTTTGGTTTAGCAGCTACTAACC
TTGCAAGAGCAATTGCAACTGGTCTAGCTAGAGGTGCTGGTACAGCTGGT
CTGCATGTTGCTGGGATCGCTATCGGTGCTGTACTTATACCAATTGATCT
ATTCCAAATGATCTCCAACTCGATTAAAATccacaaaaaagaaaaagctg
aAATTgccaaagatttggaaaatattGCTGATGAGCTGAGAACCGAGCTA
TTTTCATTGTTGAAAGAACGTCAATACCAATTGGTTGAGTTGGAAAGATA
TGATGatgataaacaaaaacattgtttatTACTGGCAGTTGAAGAATCTG
AACTGGAAATGGTTTCCAAATCCAATCTCTCATTAGCTGAAGTCAGAAAG
GAACATGTTGTGATACTTGATGTTATTGGACCATGTTTAGATGGTGAACT
GTACCAAGAAATGGTAGATAAATGGATCACCAGTAATATTCTTGATGAGG
ATAGTTCTGAAAACGACGAAGATGATGACGACATTGAAGATGGATACCAA
ATTGTTGGAGAAGATGATATTTTGTTGGAACGTCGCTGCTAAATGGGTCC
AAAGCATTCAAGGCATGAGCCTTTAAATGACAAACTTTATTGTTCAATTG
ATATGGACATGCAACCTGTGGATCAATTCAAAGTTCTTGGTTGTGGTCAT
ATCTTTTGTGTTGAATGTCTTGAAGCTTGGAAAGAGCAAAAACTGATCAA
TTGCCCGAAATGTAGATATGAGGAAAAACGTAGTCTTTACGATCTCACTG
ACCCACGTTATTACGAAGGACCCTTATATATTGATCAATCGCCAGAAGAC
gaagatattaaggaaatacaAACATTACTTCATGCTCAGATGGTCCGAAG
AGCAAAAACAATCAATATTTTGCTGGATGCAGCAGATGCAGTGACACAAA
TTGAATTAAGTGCAGCAGGCGTGAAGATTGGGGGAGCTGTTGCGGGTCTT
GTGGGTACAGGAATGGTAGTCACAGGGGGTGTCCTTTCTTTAACCGGAGT
TGGAGCAGTTGCTGGTGTCCCACTTGCTATGGCTGGTGCTGCTGTTGGTG
GAACAGGTGGCCTGGTTGTTGGTGGTGGTATTATCGGTGAGATGATCTCC
AAGAAGCAAGAATTGAAAGGAGCAAATGAGTATTTACAATCAGATTATTT
TCATTCAATGCAATTGAGAATCCTCATTGGAAGAGCAGCTAGAAGTGAAt
cgtttgctgaaaaattgaatattccTCTACAAGATGCACTTGGCTTTATT
GGTCTCGTTGGTCGTACTGCAAAGTTTGGTTTAGCAGCTACTAACCTTGC
AAGAGCAATTGCAACTGGTCTAGCTAGAGGTGCTGGTACAGCTGGTCTGC
ATGTTGCTGGGATCGCTATCGGTGCTGTACTTATACCAATTGATCTATTC
CAAATGATCTCCAACTCGATTAAAATccacaaaaaagaaaaagctgaAAT
TgccaaagatttggaaaatattGCTGATGAGCTGAGAACCGAGCTATTTT
CATTGTTGAAAGAACGTCAATACCAATTGGTTGAGTTGGAAAGATATGAT
GatgataaacaaaaacattgtttatTACTGGCAGTTGAAGAATCTGAACT
GGAAATGGTTTCCAAATCCAATCTCTCATTAGCTGAAGTCAGAAAGGAAC
ATGTTGTGATACTTGATGTTATTGGACCATGTTTAGATGGTGAACTGTAC
CAAGAAATGGTAGATAAATGGATCACCAGTAATATTCTTGATGAGGATAG
TTCTGAAAACGACGAAGATGATGACGACATTGAAGATGGATACCAAATTG
TTGGAGAAGATGATATTTTGTTGGAACGTCGCTGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015134XLOC_015134Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026955-proteinTCONS_00026955-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026955-exon-sc0000597-1491911889:122964..123020TCONS_00026955-exon-sc0000597-1491911889:122964..123020Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1510915933:122964..123020TCONS_00026955-exon-sc0000597-1510915933:122964..123020Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1575043694:122964..123020TCONS_00026955-exon-sc0000597-1575043694:122964..123020Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1491911889:126595..126961TCONS_00026955-exon-sc0000597-1491911889:126595..126961Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1510915933:126595..126961TCONS_00026955-exon-sc0000597-1510915933:126595..126961Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1575043694:126595..126961TCONS_00026955-exon-sc0000597-1575043694:126595..126961Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1491911889:127174..127283TCONS_00026955-exon-sc0000597-1491911889:127174..127283Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1510915933:127174..127283TCONS_00026955-exon-sc0000597-1510915933:127174..127283Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1575043694:127174..127283TCONS_00026955-exon-sc0000597-1575043694:127174..127283Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1491911889:127525..128969TCONS_00026955-exon-sc0000597-1491911889:127525..128969Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1510915933:127525..128969TCONS_00026955-exon-sc0000597-1510915933:127525..128969Clytia hemisphaericaexon
TCONS_00026955-exon-sc0000597-1575043694:127525..128969TCONS_00026955-exon-sc0000597-1575043694:127525..128969Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000597supercontigsc0000597:122964..128969 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.20922 3.77237 2.20139 1.62084 6.48728 5.38266 6.59702 6.99631 5.20231 6.98787 10.9456 4.28507 7.86504 5.93905 6.65824 10.7363 8.12532 8.54411 8.26717 10.7246 11.744 10.6626 7.72194 11.22 10.588 11.3317 25.9726 17.9804 13.6153 11.3105
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026955 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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