TCONS_00022662-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022662-protein
Unique NameTCONS_00022662-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022662-protein ID=TCONS_00022662-protein|Name=TCONS_00022662-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
MADKRGSSRLKEQNKRHVIDTATRAKRQRKQLESLENDNFHDDPHFQMDQ
FLSKKKLPSFSTDGIDSKKKRKSKVGDIFKLRAKRSFQALLEELSAESKK
GEPNYINAAAKPSNFPNRNFCAVCGYFSKYTCVTCGTRYCCVNCLKTHKD
TRCMKWTA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012731XLOC_012731Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022662TCONS_00022662Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 116..151
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 118..146
e-value: 5.6E-9
score: 35.6
IPR007529Zinc finger, HIT-typePROSITEPS51083ZF_HITcoord: 121..153
score: 9.966

Blast
[Close]
BLAST of TCONS_00022662-protein vs. Swiss-Prot (Human)
Match: ZNHI1 (Zinc finger HIT domain-containing protein 1 OS=Homo sapiens GN=ZNHIT1 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.163e-47
Identity = 80/158 (50.63%), Postives = 106/158 (67.09%), Query Frame = 0 
Query:    1 MADKRGSSRLKEQNKRHVIDTATRAKRQRKQLESLENDNFHDDPHFQMDQFLSKKKLPSFSTDGIDSKKKRKSKVGDIFKLRAKRSFQALLEELSAESKKGEPNYINAAAKPSNFPNRNFCAVCGYFSKYTCVTCGTRYCCVNCLKTHKDTRCMKWTA 158
            M +K+ S R ++  +R V+D A R +R  +QLE+LENDNF DDPH  + Q    K+LP F  D    KKK+K++    FKLR +++FQALLEE +    +G PNY+ A A P + P R FCAVCG+ S YTCV+CG RYC V CL TH++TRC+KWT 
Sbjct:    1 MVEKKTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQL--GKRLPQFDDDADTGKKKKKTRGDH-FKLRFRKNFQALLEEQNLSVAEG-PNYLTACAGPPSRPQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 154
The following BLAST results are available for this feature:
BLAST of TCONS_00022662-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNHI13.163e-4750.63Zinc finger HIT domain-containing protein 1 OS=Hom... [more]
back to top