TCONS_00022435-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00022435-protein
Unique Name	TCONS_00022435-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	552

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00022435-protein ID=TCONS_00022435-protein|Name=TCONS_00022435-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bp
MTILIKSFGTLLGISSTVAGYEWLKWNYAEASNETMTEIHDDFSEKNEVN
LDFANLGKISPPNMNKRKQDGNSTDQTSLRNHKDFTDHVITYDRQYKHVA
PKQDGNSTDQTSLHNNKDFTNHVITYDRQYKHVVPKLFRVLQQIKEETGS
PGISFAISRDGDVIMKGGIGLADVENNLPMTSQTILRIASISKSLTSIAV
GKLLEEDMINLETPIQTYLKDFPVKKFHNKAFNITTKQLLSHTSGIRGYF
QDPNKQKDKEDEKVSEKDKIKADILLQKYGKEANTKWNENLIMRHYKNVQ
DGLELFINDPLIYQPGSDYEYSSLAYSLVSRIIEETSGQDYVMHMKDVCR
RLGMKNTCVDLNNPIIPNRGRYYDRAKNTHRLMNVPYADNSYKWSGGGFL
SNVDDLILFGNEMLKCHSSDKGILKPSTIETLWHPVTETSTKKSQYALGW
QIPSIVERELGNNAVYHTGGAIGVSSVFYIVPSTKNITGNPKEESNRKEN
PKEEWNITGNPKEKCNQKGKPKGTVIALIVNMQSIGLTKTAEKLNDILDQ
EL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012583	XLOC_012583	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00022435	TCONS_00022435	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001466	Beta-lactam-related
IPR012338	Beta-lactam/transpept-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.710.10		coord: 136..552 e-value: 2.6E-80 score: 269.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..519
IPR001466	Beta-lactamase-related	PFAM	PF00144	Beta-lactamase	coord: 139..485 e-value: 4.1E-48 score: 164.2
IPR012338	Beta-lactamase/transpeptidase-like	SUPERFAMILY	56601	beta-lactamase/transpeptidase-like	coord: 134..485

Blast

[Close]

BLAST of TCONS_00022435-protein vs. Swiss-Prot (Human)
Match: LACTB (Serine beta-lactamase-like protein LACTB, mitochondrial OS=Homo sapiens GN=LACTB PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 7.283e-83
Identity = 165/460 (35.87%), Postives = 244/460 (53.04%), Query Frame = 0

Query:  140 VLQQIKEETGSPGISFAISRDGDVIMKGGIGLADVENNLPMTSQTILRIASISKSLTSIAVGKLLEEDMINLETPIQTYLKDFPVKKFHNKAFNITTKQLLSHTSGIRGYFQDPNKQKD------------------KEDEKVSEKDKI---------KADILLQKYGKEANTKWNENLIMRH-YKNVQDGLELFINDPLIYQPGSDYEYSSLAYSLVSRIIEETSGQDYVMHMKDVCRRLGMKNTCVDLNNPIIPNRGRYYDRAKNTHRLMNVPYADNSYKWSGGGFLSNVDDLILFGNEMLKCHSSD----------KGILKPSTIETLWHPVTETST---KKSQYALGWQIPSIVERELGNNAVY-------HTGGAIGVSSVFYIVPSTKNITGNPKEESNRKENPKEEWNITGNPKEKCNQKGKPKGTVIALIVNMQSIGLTKTAEKLNDILDQE 551
            +L +IK+E G+PGI   +S DG  +   G+G ADVEN +P   +T++RIASISKSLT +A+ KL E   ++L+ P+Q Y+ +FP K++  +  ++TT+ L+SH SGIR Y +D  K K+                  +++ K +EK+           +A     K GK+ N      L +R  ++N  + L LF NDPL ++PGS + YS+  Y+L++ I+E  SG  Y+ +M+ +   L M  T  + N P+I NR R+Y   K   RL+N PY DNSYKW+GGGFLS V DL+ FGN ML  +              G LKP T+  +W PV  T     K+ +YA+ W    +VER+    +         HTGGA+G SSV  ++P                    EE +      E  N K  P+G ++++I NMQS+GL  TA K+    D++
Sbjct:  114 LLHRIKDEVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFENSIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTVQEENEPVIYNRARFYVYNKK-KRLVNTPYVDNSYKWAGGGFLSTVGDLLKFGNAMLYGYQVGLFKNSNENLLPGYLKPETMVMMWTPVPNTEMSWDKEGKYAMAW---GVVERKQTYGSCRKQRHYASHTGGAVGASSVLLVLP--------------------EELDT-----ETINNKVPPRGIIVSIICNMQSVGLNSTALKIALEFDKD 544

The following BLAST results are available for this feature:

BLAST of TCONS_00022435-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00022435-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LACTB	7.283e-83	35.87	Serine beta-lactamase-like protein LACTB, mitochon...	[more]

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TCONS_00022435-protein (polypeptide) - C. hemisphaerica