Conserved uncharacterized protein (polypeptide) - C. hemisphaerica

Overview
NameConserved uncharacterized protein
Unique NameTCONS_00022194-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length559

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022194-protein ID=TCONS_00022194-protein|Name=Conserved uncharacterized protein|organism=Clytia hemisphaerica|type=polypeptide|length=559bp
MGFWVNEFPKYFVLFIWLGINVMLFALDYIKFDDEKKYFYLKYIVKTGLP
VARGSAAMLNFNCMLILFPVCRNLLSLIRDFPFLPHAVGRIMDKNITFHR
MIAYMICFATALHLGAHIFNFEYLIASRDATTGLTKYLNDFKDGEDKDRL
NPIESAGLDPVLELLQTVAGITGVIITISLITMVSSSTELIRRSYFEVFW
FTHHLFVVFFIGMLFHGFGELLRSQNNTSEHNPEYCSQDDRYNTDSECQK
PPRFSAAGPQSWKWIIAPMGLYLIERCIRFYRSFQTCEVKKVVKHPSKVI
EVQMRKPGFRAQAGQYIFLHCPSISPLEWHPFTLTSCPEEDFFSVHIRIV
GDWTQALSNSCGNDTDNVDVSKIPRLACDGPFGTASTDVFRHENVICCGA
GIGVTPFASILKSIWYRQQRKDTTLRIKKVYFYWICPDTNAFEWFSDLLQ
SLEQQMMEKGEMGFLEYNIYLTRGWGKGDARNIILHENDEEDVITGLKQK
TNFGRPNWDEIFRTTAIKHKGSDVGVFFCGPAILSHTLHEMSNKHSNETT
KFYYNKENF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012450XLOC_012450Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022194TCONS_00022194Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000778Cyt_b245_heavy_chain
IPR013121Fe_red_NAD-bd_6
IPR013130Fe3_Rdtase_TM_dom
IPR013112FAD-bd_8
IPR017927Fd_Rdtase_FAD-bd
IPR017938Riboflavin_synthase-like_b-brl
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016020 membrane
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000778Cytochrome b245, heavy chainPRINTSPR00466GP91PHOXcoord: 397..414
score: 83.33
coord: 102..120
score: 48.68
coord: 520..538
score: 47.37
coord: 171..194
score: 61.46
coord: 374..387
score: 71.43
coord: 196..216
score: 76.19
NoneNo IPR availableGENE3D3.40.50.80coord: 381..559
e-value: 7.7E-41
score: 139.3
NoneNo IPR availableGENE3D1.20.950.20coord: 12..230
e-value: 9.3E-4
score: 17.9
NoneNo IPR availableGENE3D2.40.30.10coord: 276..380
e-value: 2.1E-22
score: 78.8
NoneNo IPR availableSFLDSFLDG01169NADPH_oxidase_subgroup_(NOX)coord: 3..559
e-value: 0.0
score: 528.5
NoneNo IPR availableSFLDSFLDS00052Ferric_Reductase_Domaincoord: 14..559
e-value: 0.0
score: 237.2
NoneNo IPR availableSFLDSFLDG01168Ferric_reductase_subgroup_(FRcoord: 13..559
e-value: 0.0
score: 241.6
NoneNo IPR availableCDDcd06186NOX_Duox_like_FAD_NADPcoord: 291..559
e-value: 7.60683E-50
score: 171.334
NoneNo IPR availableSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 391..552
IPR013121Ferric reductase, NAD binding domainPFAMPF08030NAD_binding_6coord: 392..542
e-value: 1.8E-32
score: 112.5
IPR013130Ferric reductase transmembrane component-like domainPFAMPF01794Ferric_reductcoord: 53..213
e-value: 9.1E-23
score: 80.6
IPR013112FAD-binding 8PFAMPF08022FAD_binding_8coord: 288..385
e-value: 3.8E-22
score: 78.3
IPR017927Ferredoxin reductase-type FAD-binding domainPROSITEPS51384FAD_FRcoord: 282..388
score: 14.782
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 285..385

Blast
[Close]
BLAST of Conserved uncharacterized protein vs. Swiss-Prot (Human)
Match: CY24B (Cytochrome b-245 heavy chain OS=Homo sapiens GN=CYBB PE=1 SV=2)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 294/572 (51.40%), Postives = 384/572 (67.13%), Query Frame = 0 
Query:    1 MGFW-VNEFPKYFVLFIWLGINVMLFALDYIKFDDEKKYFYLKYIVKTGLPVARGSAAMLNFNCMLILFPVCRNLLSLIR-DFPFLPHAVGRIMDKNITFHRMIAYMICFATALHLGAHIFNFEYLIASR-DATTGLTKYLNDFKDGEDKDRLNPIESAGLDPVLELLQTV---AGITGVIITISLITMVSSSTELIRRSYFEVFWFTHHLFVVFFIGMLFHGFGELLRSQNNTS--EHNPEYCSQD-DRYNTDSECQKPPRFSAAGPQSWKWIIAPMGLYLIERCIRFYRSFQTCEVKKVVKHPSKVIEVQMRKPGFRAQAGQYIFLHCPSISPLEWHPFTLTSCPEEDFFSVHIRIVGDWTQALSNSCGNDTDNV-DVSKIPRLACDGPFGTASTDVFRHENVICCGAGIGVTPFASILKSIWYRQQRKDTTLRIKKVYFYWICPDTNAFEWFSDLLQSLEQQMMEKGEMGFLEYNIYLTRGWGKGDARNIILHENDEEDVITGLKQKTNFGRPNWDEIFRTTAIKHKGSDVGVFFCGPAILSHTLHEMSNKHSNETTK---FYYNKENF 559
            MG W VNE    FV+ +WLG+NV LF   Y  +D   K+FY + ++ + L +AR  AA LNFNCMLIL PVCRNLLS +R         V R +D+N+TFH+M+A+MI   +A+H  AH+FN E+ + +R + +   +  L++  D +++  LN       +P   L   V   AGITGV+IT+ LI +++SST+ IRRSYFEVFW+THHLFV+FFIG+  HG   ++R Q   S   HN   C Q    +    EC   P+F+   P +WKWI+ PM LYL ER +RF+RS Q   + KVV HP K IE+QM+K GF+ + GQYIF+ CP +S LEWHPFTLTS PEEDFFS+HIRIVGDWT+ L N+CG D     D  K+P++A DGPFGTAS DVF +E V+  GAGIGVTPFASILKS+WY+     T L++KK+YFYW+C DT+AFEWF+DLLQ LE QM E+   GFL YNIYLT GW +  A +  +H ++E+DVITGLKQKT +GRPNWD  F+T A +H  + +GVF CGP  L+ TL + S  +S    +   F +NKENF
Sbjct:    1 MGNWAVNEGLSIFVILVWLGLNVFLFVWYYRVYDIPPKFFYTRKLLGSALALARAPAACLNFNCMLILLPVCRNLLSFLRGSSACCSTRVRRQLDRNLTFHKMVAWMIALHSAIHTIAHLFNVEWCVNARVNNSDPYSVALSELGDRQNESYLNFARKRIKNPEGGLYLAVTLLAGITGVVITLCLILIITSSTKTIRRSYFEVFWYTHHLFVIFFIGLAIHGAERIVRGQTAESLAVHNITVCEQKISEWGKIKEC-PIPQFAGNPPMTWKWIVGPMFLYLCERLVRFWRSQQKVVITKVVTHPFKTIELQMKKKGFKMEVGQYIFVKCPKVSKLEWHPFTLTSAPEEDFFSIHIRIVGDWTEGLFNACGCDKQEFQDAWKLPKIAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQMQERNNAGFLSYNIYLT-GWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGVHFIFNKENF 570
The following BLAST results are available for this feature:
BLAST of Conserved uncharacterized protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CY24B0.000e+051.40Cytochrome b-245 heavy chain OS=Homo sapiens GN=CY... [more]
back to top