TCONS_00022092-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022092-protein
Unique NameTCONS_00022092-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length539

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022092-protein ID=TCONS_00022092-protein|Name=TCONS_00022092-protein|organism=Clytia hemisphaerica|type=polypeptide|length=539bp
MSRWGKKQKLPEVFNSVAEGLQKLYKEKLLPLEEAYKFHEFHSPKLEDSD
FFAKPMVLLVGQYSTGKTTFIKYLLEQDFPGIRVGPEPTTDTFTCVMHGN
HDRVVPGNALVVDSSKSFRSLSAFGNAFLNRFACSETANPVLETITLVDS
PGILSGEKQSINRGYDFTGVLEWFAERVDRIILLFDAHKLDISDEFRRGI
EALHGFDDKIRIVLNKADMISTQQLMRVYGAMMWSLGKVINTPEVTRVYV
GSFWDQPLKMDDNRKLFELEETDLFADLQGLPKNAALRKLNDLIRRARLA
KVHAYIMTALKDDMPSVFGKDKKKAELIKNLGDTFRRIQMQHEISPGDFP
NLQRMQENLQYHDFSKFAPLKPKLIEKVDQMLNTDIARLMAMLPQEFTDR
EDEQTVKGGVFASAQGDFNPFAEGAAEGFNLGAGSSAWVVESTNSKEKYD
RMFLDLGPVDGKLSGASAKKEMVKSKLPKNALAKIWTLSDIDKDGQLDEE
EFALAMYLIDTKLGGSDDIPTVLPEHLVPPGKRKLLFGN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012390XLOC_012390Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022092TCONS_00022092Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000261EH_dom
IPR031692EHD_N
IPR022812Dynamin_SF
IPR018247EF_Hand_1_Ca_BS
IPR030381G_DYNAMIN_dom
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005525GTP binding
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000261EH domainSMARTSM00027eh_3coord: 437..533
e-value: 2.2E-35
score: 133.6
IPR000261EH domainPFAMPF12763EF-hand_4coord: 446..536
e-value: 2.1E-19
score: 69.3
IPR000261EH domainPROSITEPS50031EHcoord: 445..534
score: 22.921
IPR031692EH domain-containing protein, N-terminalPFAMPF16880EHD_Ncoord: 20..51
e-value: 2.1E-16
score: 59.4
NoneNo IPR availableGENE3D1.10.238.10coord: 442..536
e-value: 7.9E-12
score: 44.3
NoneNo IPR availableGENE3D3.40.50.300coord: 8..441
e-value: 4.6E-23
score: 81.4
NoneNo IPR availableCDDcd00052EHcoord: 449..513
e-value: 8.90561E-22
score: 88.4306
NoneNo IPR availableCDDcd09913EHDcoord: 56..296
e-value: 3.57533E-154
score: 442.483
IPR022812Dynamin superfamilyPFAMPF00350Dynamin_Ncoord: 57..197
e-value: 9.4E-12
score: 45.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 490..502
IPR030381Dynamin-type guanine nucleotide-binding (G) domainPROSITEPS51718G_DYNAMIN_2coord: 51..282
score: 39.775
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 477..512
score: 11.25
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 443..530
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 47..300

Blast
[Close]
BLAST of TCONS_00022092-protein vs. Swiss-Prot (Human)
Match: EHD1 (EH domain-containing protein 1 OS=Homo sapiens GN=EHD1 PE=1 SV=2)

HSP 1 Score: 714.531 bits (1843), Expect = 0.000e+0
Identity = 350/535 (65.42%), Postives = 422/535 (78.88%), Query Frame = 0 
Query:    1 MSRWGKKQKLPEVFNSVAEGLQKLYKEKLLPLEEAYKFHEFHSPKLEDSDFFAKPMVLLVGQYSTGKTTFIKYLLEQDFPGIRVGPEPTTDTFTCVMHGNHDRVVPGNALVVDSSKSFRSLSAFGNAFLNRFACSETANPVLETITLVDSPGILSGEKQSINRGYDFTGVLEWFAERVDRIILLFDAHKLDISDEFRRGIEALHGFDDKIRIVLNKADMISTQQLMRVYGAMMWSLGKVINTPEVTRVYVGSFWDQPLKMDDNRKLFELEETDLFADLQGLPKNAALRKLNDLIRRARLAKVHAYIMTALKDDMPSVFGKDKKKAELIKNLGDTFRRIQMQHEISPGDFPNLQRMQENLQYHDFSKFAPLKPKLIEKVDQMLNTDIARLMAMLPQEFTDREDEQTVKGGVFASAQGDFN-PFAEGAAEGFNLGAGSSAWVVESTNSKEKYDRMFLDLGPVDGKLSGASAKKEMVKSKLPKNALAKIWTLSDIDKDGQLDEEEFALAMYLIDTKLGGSDDIPTVLPEHLVPPGKRK 534
            +S+  +++K PE+F +VAEGL++LY +KLLPLEE Y+FHEFHSP LED+DF  KPMVLLVGQYSTGKTTFI++L+EQDFPG+R+GPEPTTD+F  VMHG  + VVPGNALVVD  + FR L+AFGNAFLNRF C++  NPVL++I+++D+PGILSGEKQ I+RGYDF  VLEWFAERVDRIILLFDAHKLDISDEF   I+AL   +DKIR+VLNKAD I TQQLMRVYGA+MWSLGK+INTPEV RVY+GSFW  PL + DNRKLFE EE DLF D+Q LP+NAALRKLNDLI+RARLAKVHAYI+++LK +MP+VFGK+ KK EL+ NLG+ +++I+ +H+ISPGDFP+L++MQE LQ  DFSKF  LKPKL++ VD ML  DIARLM M+ QE       Q VKGG F    G  N PF  G  EG   G     WVV     K  YD +F  L PV+GK++GA+AKKEMVKSKLP   L KIW L+D+DKDG LD+EEFALA +LI  KL G  ++P  LP HLVPP KR+
Sbjct:    5 VSKDARRKKEPELFQTVAEGLRQLYAQKLLPLEEHYRFHEFHSPALEDADFDNKPMVLLVGQYSTGKTTFIRHLIEQDFPGMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRPFRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISPGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMVRQE-ESLMPSQVVKGGAF---DGTMNGPFGHGYGEGAGEGIDDVEWVV--GKDKPTYDEIFYTLSPVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGH-ELPADLPPHLVPPSKRR 532
The following BLAST results are available for this feature:
BLAST of TCONS_00022092-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EHD10.000e+065.42EH domain-containing protein 1 OS=Homo sapiens GN=... [more]
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