TCONS_00021836-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021836-protein
Unique NameTCONS_00021836-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length412

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021836-protein ID=TCONS_00021836-protein|Name=TCONS_00021836-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MKKKEHNKSRSRKNNNEVVSTERLYTFYVLIPFVNVTHTLRKLSKRATVR
ELKEVIEITCGIPTSLQRIYFLDQSDLTDDCVLTSLDIVNKATFTLAVWN
KWENIIRSVYKNDFKGVTDYVLCSDRGHKVSPVATRQRRGEVALLTAVKL
GNVDVIRRLLEEGINVNARTELGYTPLHIAVANGKYRCIDFLLEKGAIDD
SKTNPNGQEAVRLSKENGYPDSERHLCMFEWQLRAKTAPSRPTKLVPLLQ
HQQFDSKNPTWFDGPLATKFVCSTLPQKEFSGTRINAPPVVPVVPPYQDD
KEYFEKTDSGAERMHTYISHENWLRRKQEEAEMLRQKQEQLAAMRLIEKE
REETEKKRLMVLRKREHEKRTLAIKDSANEKYRKKQGIYEDYTYVPGYSK
SILQQYMSDMMT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012254XLOC_012254Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021836TCONS_00021836Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 320..357
NoneNo IPR availableGENE3D3.10.20.90coord: 25..98
e-value: 2.0E-6
score: 27.2
NoneNo IPR availablePFAMPF13637Ank_4coord: 144..193
e-value: 3.3E-11
score: 43.4
NoneNo IPR availableCDDcd00204ANKcoord: 140..204
e-value: 1.64127E-16
score: 74.3422
NoneNo IPR availableCDDcd01769UBLcoord: 47..98
e-value: 3.66097E-5
score: 40.3282
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 172..202
e-value: 0.0017
score: 27.6
coord: 139..168
e-value: 0.1
score: 21.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 139..171
score: 11.648
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 172..204
score: 11.942
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 99..243
e-value: 1.4E-21
score: 76.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 139..226
score: 22.437
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 133..230
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 27..98
score: 9.243
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 26..98

Blast
[Close]
BLAST of TCONS_00021836-protein vs. Swiss-Prot (Human)
Match: ANR60 (Ankyrin repeat domain-containing protein 60 OS=Homo sapiens GN=ANKRD60 PE=4 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 8.330e-22
Identity = 60/195 (30.77%), Postives = 99/195 (50.77%), Query Frame = 0 
Query:   48 TVRELKEVIEITCGIPTSLQRIYFLDQSDLTDDCVLTSLDIVNKATFTLAVW--NKWENIIRSVYKNDFKGVTDYVLCSDRGHKVSPVATRQ---------RRGEVALLTAVKLGNVDVIRRLLEEGINVNARTELGYTPLHIAVANGKYRCIDFLLEKGA-IDDSKTNPNGQEAVRLSKENGYPDSERHLCMFE 230
            TVRELKE +++  GIP +LQR+ +LD+  L DD  L   D+V     +L +W  + W  ++ +  + D   ++   L  D  ++ +     +         +R  VAL  A   G+ D ++ LLE G +  +R+ LG TPLH+A A G+  CI  LL+ GA I D   +  G+  + ++    +  SER + +  
Sbjct:  117 TVRELKEELDLMVGIPFNLQRLQYLDEGVLMDDTTLKFHDVVPGGIISLCIWHHDGWTELVLAAVEGDPSKLSCLGLTEDSFYRTANSEHFEGEKWKHWTSQRAFVALYVASHRGHFDAVQYLLEHGASCLSRSPLGRTPLHVAAAMGRSDCIILLLQHGASIHDR--DAKGETPISIAHRLNHTLSERQMVLLH 309
The following BLAST results are available for this feature:
BLAST of TCONS_00021836-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR608.330e-2230.77Ankyrin repeat domain-containing protein 60 OS=Hom... [more]
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