TCONS_00021128-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021128-protein
Unique NameTCONS_00021128-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021128-protein ID=TCONS_00021128-protein|Name=TCONS_00021128-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
LLKDNELAMASIDDLNINELKDLCKRCKIPVANKSKAALVLDLQQLYGSI
IVGKSDCHQFVKTPGHTGGFYHFVCPHGTTVCSKFMALTESVRDAADLWL
SLKYPPVLFICDTPCTLVRHINLRCPEEAEKYWGEFDGCFEVPTLERNPK
KNNDVPQIVPSEFREANENISISQDHKIHPLTGETRRYICGDRFHNQTEP
HKSHLCLFHDIDTSNQSSTIKTSFQESLNHKKNLRRNRASCVQDILHHIF
YNYLMNYYDNEQVVSAQKNFLTEKYSKKITRDEYLRFKLC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011835XLOC_011835Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021128TCONS_00021128Clytia hemisphaericatranscript
Blast
[Close]
BLAST of TCONS_00021128-protein vs. Swiss-Prot (Human)
Match: HMGX3 (HMG domain-containing protein 3 OS=Homo sapiens GN=HMGXB3 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.972e-21
Identity = 73/272 (26.84%), Postives = 123/272 (45.22%), Query Frame = 0 
Query:    1 LLKDNELAMASIDDLNINELKDLCKRCKIPV-ANKSKAALVLDLQQLYGSIIVGKSDCHQFVKTPGH-TGGFYHFVCPHGTTVCSKFMALTESVRDAADLWLSLKYPPVLFICDTPCTLVRHINLRCPEEAEKYWGEFDGCFEVPTLERNPKKNNDVPQIVPSEFREANENISISQ-DHKI-HPLTG-ETRRYICGDRFHNQTEPHKSHLCLFHDIDTSNQSSTIKTSFQESLNHKKNLRRNRASCVQDILHHIFYNYLMNYYDNEQVVSAQ 267
            LL++    +  I   +  +L+ L ++C IP  A  SK  L   L  LY S+  G     + ++ P H TGG  + VCPH     SK++   ES RD  DL  S ++ P +++ D   ++    +L  PE   + WG   GCF  PT    P  +   P+++   +      + +++ +H I HP+T   TRR +      N  +P   H    H +    + +   T     ++ K N  R R     +  H+  YN LM++  + ++V+ Q
Sbjct: 1238 LLQEGTCKLDEIGSYSEEKLQHLLRQCGIPFGAEDSKDQLCFSLLALYESVQNGA----RAIRPPRHFTGGKIYKVCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDMATSVALCADLCYPELTNQMWGRNQGCFSSPT---EPPVSVSCPELLDQHY-----TVDMTETEHSIQHPVTKTATRRIVHAGLQPNPGDPSAGH----HSLALCPELAPYATILASIVDSKPNGVRQRPIAFDNATHYYLYNRLMDFLTSREIVNRQ 1493
The following BLAST results are available for this feature:
BLAST of TCONS_00021128-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMGX31.972e-2126.84HMG domain-containing protein 3 OS=Homo sapiens GN... [more]
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