TCONS_00020727-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020727-protein
Unique Name	TCONS_00020727-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	815

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020727-protein ID=TCONS_00020727-protein|Name=TCONS_00020727-protein|organism=Clytia hemisphaerica|type=polypeptide|length=815bp
VKRKIGLKVLEMGGNAVIGYQQQFDLEGETGLVVRSIGTSVTLLSENDNN
TFFSTPITAQSPEQHLPPGGGGGELIHHAWQHRLSHPSPHGVSFSSEPDY
NTDKLDPADIRLNLRTRNHYTGEMEFPFFTINCPPQDFVLHLGGVVSSRS
VKLLDKINNPDDPETRDGWWNELRIEIRSHMKAMGCTAVIGYTETTSICD
DLIVLSASGTAAVVVTQQINTNNQTHHEDNEDGTYNVLTGLREDGGDNGR
KYSDSDDKKPLLKQDEVDEETIPSQQHTGHVFHTLPGCHICHVPYSDVEL
PLPVTLQKCVFCRQDHVPDILLSTTDIPDEIPFIGTGSLIQARVVRLKKK
EKGESDAENVSQILPFLEFDLHQQLINKLKVKGMNAVFGLKTRLSIGEEI
IIAVTTGTAVYLSALPPPPVIVLTSRADAHKEKDEFSDMQTKLMAITKHN
KEFFNLSDIQDHHHKSTDENNEPKEKGRKLDLLIDGKESYVFELDDKSDG
SIFPLMNETNFEGFHVFNTEATPGVPLFKSNQKLLCIFRHLKIPATDDDA
RLSRWISSVCDNSLLSLRLKTRTLHPCALSHVSFDIEITDEEYLQLTLTC
YAITYNDSFNKHPTRKHTLLNRSLSSNSRSSTSRSCDELGKDEDAEQGFS
IRSGKRGGNANNSPLPFTVPVLITPLRCTPNMEIKKYLGNVNLFLVRENT
DLKEVGGVPLFIQQFIAEVRAIITAHVLALGGNAILSFHINEILLTSNTQ
KNEAQCLINVSGDVAEIRSESDTGCALYCDTRSSKASSSVDSPPITPDKA
ELIFKLDRAVYGTNV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011628	XLOC_011628	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020727	TCONS_00020727	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.110.70		coord: 1..43 e-value: 5.5E-4 score: 19.9 coord: 164..214 e-value: 3.2E-4 score: 20.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 620..657
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..260

Blast

[Close]

BLAST of TCONS_00020727-protein vs. Swiss-Prot (Human)
Match: C2CD5 (C2 domain-containing protein 5 OS=Homo sapiens GN=C2CD5 PE=1 SV=1)

HSP 1 Score: 462.996 bits (1190), Expect = 3.967e-149
Identity = 293/836 (35.05%), Postives = 437/836 (52.27%), Query Frame = 0

Query:    1 VKRKIGLKVLEMGGNAVIGYQQQFDLEGETGLVVRSIGTSVTLLSENDNNTFFSTPITAQSPEQHLPPGGGGGELIHHAWQHRLSHPSPHGVSFSSEPDYNTDKLDP--------------------------------ADIRLNLRTRNHYTGEM-EFPFFTINCPPQDFVLHLGGVVSSRSVKLLDKINNPDDPETRDGWWNELRIEIRSHMKAMGCTAVIGYTETTSICDDLIVLSASGTAAVVVTQQINTNNQTHHEDNEDGTYNVLTGLREDGGDNGRKYSDSDDKKPLLKQDEVDEETIPSQQHTGHVFHTLPGCHICHVPYSDVELPLPVTLQKCVFCRQDHVPDILLSTTDIPDEIPFIGTGSLIQARVVRLKKKEKGESDAENVSQILPFLEFDLHQQLINKLKVKGMNAVFGLKTRLSIGEEIIIAVTTGTAVYLSALPPPPVIVLTSRA--DAHKEKDEFSDMQTKLMAITKHNKEFFNLSDIQDHHHKSTDENNEPKEKGR-------------KLDLLIDGKESYVFELDDK-SDGSIFPLMNET-NFEGFHVFNTEATPGVPLFKSNQKLLCIFRHLKIPATD-DDARLSRWISSVCDNSLLSLRLKTRTLHPCALSHVSFDIEITDEEYLQLTLTCYAITYNDSFNKHPTRKHTLLNRSLSSNSRSSTSRSCDELGKDEDAEQGF--------SIRSGKRGGNANNSPLP----FTVPVL-ITPLRCTPNMEIKKYLGNVNLFLVRENTDLKEVGGVPLFIQQFIAEVRAIITAHVLALGGNAILSFHINEILLTSNTQKNEAQCLINVSGDVAEIRSESD 772
            ++RKIGLKVLEM GNAV+GY Q FDLEGE+GLVVR+IGT+              T     SP   LP      + +     +   +P+ H    S+     T    P                                   +  LR +     E  EFPFFT+   P  F++H+GGVVS+RSVKLLD+I+NPD+PETRD WW E+R EI+SH KA+GC AV+GY+E+TSIC+++ +LSASGTAAV+  + +           +DGT   + G  E                      +  EE +P++            C  CH+PY ++ +P P  L  C  CR+  VPD+L +T D+P +   IG G LIQAR+ RLKKK + E++A  +S +LPF+E+++H QL+NKLK+KGMNA+FGL+ ++++GE +++ + + T VYL+ALP P  I +  +   D   E+   S MQ K+      NKE + ++  +           EP+++ R             +LDL    K+++V E+DD  +   +  L+ +     GF+  NTE  PG+  + S  ++    R +++ + +  +  L++  + +C+N L SL  K R++ PC L HV+F + + ++E +Q+T+T  AIT++ +     T+     +   +S       +   EL  D      F           S    GN  N   P     TV V+ +TPL   P  +I KYLG +N+F +RE T L+E GGV  F+  FIAEV A++ AHV ALGGNA++S+ + + +   N  KN+AQCLINVSGD      ESD
Sbjct:  203 LQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIGTAC-------------TLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSYSRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGFLVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAVLNPRFL-----------QDGT---VEGCLE----------------------QRLEENLPTR------------CGFCHIPYDELNMPFPAHLTYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEANATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAALPTPGGIQIAGKTPNDGSYEQ-HISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPRQRSRLLRSQSESSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLELCSDSLPSHPFPPAKAMTVEKASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAVVFVRESD 976

The following BLAST results are available for this feature:

BLAST of TCONS_00020727-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020727-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
C2CD5	3.967e-149	35.05	C2 domain-containing protein 5 OS=Homo sapiens GN=...	[more]

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TCONS_00020727-protein (polypeptide) - C. hemisphaerica