TCONS_00020698-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020698-protein
Unique NameTCONS_00020698-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length455

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020698-protein ID=TCONS_00020698-protein|Name=TCONS_00020698-protein|organism=Clytia hemisphaerica|type=polypeptide|length=455bp
MFDQHGSHKMAEQYDLTSKVGTYLDRHLVFPLLEFLSSKEIYDETELLKG
RLELLQGTNMLDFVKDEYQKLHQTDDVPQELLDKRSEVIQQMKDLEASTE
AITTAFDDPDFQREAANARDGVVLFKYLTEHFDLTTEHLDTLYQYAKFQY
ECGNYQGASQYLYFYRVLVHDDDKNAASAVWGKLACEILTQNWDAALEDI
NRLKESIDNDHFSHPLHLLQQRTWLIHWSLFVFFNHAKGRDLLIEMFLYQ
PSYLNAIQTTCPHILRYLTTAVITNKRRKSILKDLVRVIQQESYTYRDPI
TEFLECLYVNFDFDGAQRKLVECETVLSNDFFLIACLDDFIENARLFIFE
TFCRIHQCISINMLAEKLNMTPEEAERWIVNLIRNARLDAKIDSKQGHVV
MGTQAAAVHQQVIERTKGLMFKTQNISGNIDKKLAALKKQPFSEPFAMAW
GGYEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011610XLOC_011610Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020698TCONS_00020698Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR019010eIF3e_N
IPR011991WHTH_DNA-bd_dom
IPR016650eIF3e
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003743 translation initiation factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 335..419
e-value: 3.0E-14
score: 63.3
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 299..402
e-value: 1.0E-18
score: 67.7
NoneNo IPR availableSMARTSM00753PINTcoord: 335..419
e-value: 3.0E-14
score: 63.3
IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalSMARTSM01186eIF3_N_2coord: 15..149
e-value: 3.0E-63
score: 226.1
IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalPFAMPF09440eIF3_Ncoord: 15..149
e-value: 2.1E-42
score: 144.6
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 274..412
e-value: 9.8E-17
score: 60.3
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 329..403
IPR016650Eukaryotic translation initiation factor 3 subunit EPIRSFPIRSF016255Transl_init_eIF3ecoord: 10..444
e-value: 4.7E-182
score: 604.0
IPR016650Eukaryotic translation initiation factor 3 subunit EHAMAPMF_03004eIF3ecoord: 12..432
score: 47.187

Blast
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BLAST of TCONS_00020698-protein vs. Swiss-Prot (Human)
Match: EIF3E (Eukaryotic translation initiation factor 3 subunit E OS=Homo sapiens GN=EIF3E PE=1 SV=1)

HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0
Identity = 301/428 (70.33%), Postives = 359/428 (83.88%), Query Frame = 0 
Query:   10 MAEQYDLTSKVGTYLDRHLVFPLLEFLSSKEIYDETELLKGRLELLQGTNMLDFVKDEYQKLHQTDDVPQELLDKRSEVIQQMKDLEASTEAITTAFDDPDFQREAANARDGVVLFKYLTEHFDLTTEHLDTLYQYAKFQYECGNYQGASQYLYFYRVLVHDDDKNAASAVWGKLACEILTQNWDAALEDINRLKESIDNDHFSHPLHLLQQRTWLIHWSLFVFFNHAKGRDLLIEMFLYQPSYLNAIQTTCPHILRYLTTAVITNK---RRKSILKDLVRVIQQESYTYRDPITEFLECLYVNFDFDGAQRKLVECETVLSNDFFLIACLDDFIENARLFIFETFCRIHQCISINMLAEKLNMTPEEAERWIVNLIRNARLDAKIDSKQGHVVMGTQAAAVHQQVIERTKGLMFKTQNISGNIDKKL 434
            MAE YDLT+++  +LDRHLVFPLLEFLS KEIY+E ELL+G+L+LL  TNM+DF  D Y+ L+ +DD+P  L +KR+ V+ Q+K L+A TE I   F+DP+  R+  + RDG +LF YL +      E+LDTLY+YAKFQYECGNY GA++YLYF+RVLV   D+NA S++WGKLA EIL QNWDAA+ED+ RLKE+IDN+  S PL  LQQRTWLIHWSLFVFFNH KGRD +I++FLYQP YLNAIQT CPHILRYLTTAVITNK   +R+ +LKDLV+VIQQESYTY+DPITEF+ECLYVNFDFDGAQ+KL ECE+VL NDFFL+ACL+DFIENARLFIFETFCRIHQCISINMLA+KLNMTPEEAERWIVNLIRNARLDAKIDSK GHVVMG  A + +QQVIE+TK L F++Q ++ NI+KKL
Sbjct:    1 MAE-YDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVLKDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIENARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMGNNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKL 426
The following BLAST results are available for this feature:
BLAST of TCONS_00020698-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EIF3E0.000e+070.33Eukaryotic translation initiation factor 3 subunit... [more]
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