TCONS_00018063-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018063-protein
Unique NameTCONS_00018063-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018063-protein ID=TCONS_00018063-protein|Name=TCONS_00018063-protein|organism=Clytia hemisphaerica|type=polypeptide|length=143bp
MYDQNGRKTNKCSLQVLGFPSNQFYRQEPAKEHEIMNCLRYVRPGKGYIP
KFELFSKVDVNGEDAIGLYKWLKYMCPRPTQKISFTKYVPWTPIMTTDIE
WNFEEFLLDHKGRPIRRFSADTLPLEYENDIKRAIDACKKDSM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010125XLOC_010125Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018063TCONS_00018063Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000889Glutathione_peroxidase
IPR029760GPX_CS
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0006979response to oxidative stress
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0004602glutathione peroxidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
molecular_function GO:0004602 glutathione peroxidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000889Glutathione peroxidasePRINTSPR01011GLUTPROXDASEcoord: 99..108
score: 63.17
coord: 14..30
score: 60.97
IPR000889Glutathione peroxidasePFAMPF00255GSHPxcoord: 8..73
e-value: 5.0E-17
score: 61.3
IPR000889Glutathione peroxidasePIRSFPIRSF000303Glutathion_peroxcoord: 6..139
e-value: 3.7E-29
score: 98.9
IPR000889Glutathione peroxidasePROSITEPS51355GLUTATHIONE_PEROXID_3coord: 1..141
score: 35.598
NoneNo IPR availableGENE3D3.40.30.10coord: 2..137
e-value: 4.2E-24
score: 85.1
IPR029760Glutathione peroxidase conserved sitePROSITEPS00763GLUTATHIONE_PEROXID_2coord: 17..24
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 8..135

Blast
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BLAST of TCONS_00018063-protein vs. Swiss-Prot (Human)
Match: GPX5 (Epididymal secretory glutathione peroxidase OS=Homo sapiens GN=GPX5 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.714e-33
Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 0 
Query:   13 SLQVLGFPSNQFYRQEPAKEHEIMNCLRYVRPGKGYIPKFELFSKVDVNGEDAIGLYKWLKYMCPRPTQKISFTKYVPWTPIMTTDIEWNFEEFLLDHKGRPIRRFSADTLPLEYENDI 131
             L VLGFP NQF +QEP    EI+  L+YVRPG G++P F+LF K DVNGE    ++ +LK+ CP P++ +   K + W P+   DI WNFE+FL+   G P+ R+S        + DI
Sbjct:   93 GLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDI 211
The following BLAST results are available for this feature:
BLAST of TCONS_00018063-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPX54.714e-3344.54Epididymal secretory glutathione peroxidase OS=Hom... [more]
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