TCONS_00017946-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017946-protein
Unique NameTCONS_00017946-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length283

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017946-protein ID=TCONS_00017946-protein|Name=TCONS_00017946-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MALTGSQIFIFICIQWFAYTSATGNETVDVLIDQSISNLQKIKLKMKLLS
LLKKMYGDCLPCRSIFNSKSCDCTAITPMKDCLEFLQNGYTKNGIYKVTQ
KENVYCDQTTQNGGWTVFLRRQDGSTDFKQNWLDYKYGFGKLTSEFWLGN
EMVHDLTKPSVAPKKSELLINMRMKGQTKLVFAKYDTFEIGDEVSKYTLK
ISGVSGDANDLTALSYHNNTKFSTYDQDNDNSGGDCSNNWEGTGWWFNNC
LETLLTAILSDGNAYWTIPGIATFVEMKFRRNV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010058XLOC_010058Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017946TCONS_00017946Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 77..282
e-value: 3.8E-53
score: 192.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 80..264
e-value: 1.1E-50
score: 172.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 73..250
score: 39.103
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 80..281
e-value: 3.10319E-68
score: 212.486
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 75..265
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 220..276
e-value: 4.8E-14
score: 51.8
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 21..219
e-value: 8.3E-55
score: 185.2

Blast
[Close]
BLAST of TCONS_00017946-protein vs. Swiss-Prot (Human)
Match: TENR (Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 1.315e-41
Identity = 88/219 (40.18%), Postives = 123/219 (56.16%), Query Frame = 0 
Query:   80 KDCLEFLQNGYTKNGIY------KVTQKENVYCDQTTQNGGWTVFLRRQDGSTDFKQNWLDYKYGFGKLTSEFWLGNEMVHDLTKPSVAPKKSELLINMRMKGQTKLVFAKYDTFEIGDEVSKYTLKISGVSGDANDLTALSYHNNTKFSTYDQDNDNSGGDCSNNWEGTGWWFNNCLETLLTAILSDG------NAY------WTIPGIATFVEMKFR 280
            +DC + L NG T +G+Y      +++QK  VYCD TT  GGW VF RRQ+G TDF + W DY+ GFG +  EFWLG + +H +T    +  + EL ++MR  GQ +  FA YD F + D  + Y L+I   +G A D  +LSYH    FST D+DND +  +C+ +++G  WW+ NC  T L     +       N Y      ++IP    FVEMK R
Sbjct: 1136 QDCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRIT----SQGRYELRVDMR-DGQ-EAAFASYDRFSVEDSRNLYKLRIGSYNGTAGD--SLSYHQGRPFSTEDRDNDVAVTNCAMSYKG-AWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIP----FVEMKMR 1341
The following BLAST results are available for this feature:
BLAST of TCONS_00017946-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENR1.315e-4140.18Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3[more]
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