TCONS_00017689-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017689-protein
Unique NameTCONS_00017689-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length264

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017689-protein ID=TCONS_00017689-protein|Name=TCONS_00017689-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
MNKDEEEDEEDYMSDKYLLNESKPGLMPKLFLDRHKRGESSSSKKKNTPK
PKQDKHQSVKVKEHENRKEKLDQALDESNKGFAMLARMGFKKGMGLGKEG
QGRSEPIPIDIKTGRGGVGKTSEEERKRTKRLEMYRIKAKRRKEDEENLK
GDFKSRMRSKINERQVFADLCKSQKACHQLDQKKGMEEPIQSWYWTKQPL
QDDEEQEVEEVQDEVEEDDNEKLVILTCYLRTEHRYCIWCGITFNDENDL
KENCPGDTFEDHQD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009894XLOC_009894Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017689TCONS_00017689Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR025239DUF4187
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableCOILSCoilCoilcoord: 201..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..132
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 75..121
e-value: 2.7E-16
score: 70.1
IPR000467G-patch domainPFAMPF01585G-patchcoord: 78..119
e-value: 2.3E-14
score: 52.9
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 77..123
score: 14.237
IPR025239Domain of unknown function DUF4187SMARTSM01173DUF4187_2coord: 202..262
e-value: 1.4E-24
score: 97.7
IPR025239Domain of unknown function DUF4187PFAMPF13821DUF4187coord: 210..262
e-value: 2.1E-19
score: 68.9

Blast
[Close]
BLAST of TCONS_00017689-protein vs. Swiss-Prot (Human)
Match: GPT11 (G patch domain-containing protein 11 OS=Homo sapiens GN=GPATCH11 PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 3.856e-56
Identity = 105/261 (40.23%), Postives = 159/261 (60.92%), Query Frame = 0 
Query:    8 DEEDYMSDKYL--LNESKPGLMPKLFLDRHKRGESSSSKKKNTPKPKQDKHQSVKVKEHENRKEKLDQALDESNKGFAMLARMGFKKGMGLGKEGQGRSEPIPIDIKTGRGGVGKTSEEERKRTKRLEMYRIKAKRRKEDEENLKGDFKSRMRSKINERQVFADLCKSQKACHQLDQKKGMEEPIQSWYWTKQPLQDDEEQEVEEVQDEVEEDDN----EKLVILTCYLRTEHRYCIWCGITFNDENDLKENCPGDTFEDH 262
            +EEDYMSD ++    + +PGL P L   R  R +    ++ N     +++ +S+K +E E R   L  AL   NKGFA+L +MG+K G  LGK G G  EPIP++IKTG+ G+G  +  +RK  ++LE YR K   + + EE     F+ R+++K +E ++  DL +SQ+AC QLD +K ++ P ++WYW +   + +E++E +E  ++  + ++    EKL ILT YLR EH YCIWCG  + D+ DL  NCPG T  DH
Sbjct:    3 EEEDYMSDSFINVQEDIRPGL-PMLRQIREARRKEEKQQEANL----KNRQKSLKEEEQERRDIGLKNALGCENKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIKTGKSGIGHEASLKRKAEEKLESYRKKIHMKNQAEEKAAEQFRMRLKNKQDEMKLEGDLRRSQRACQQLDVQKNIQVPREAWYWLRLEEETEEDEEEKEQDEDEYKSEDLSVLEKLQILTSYLREEHLYCIWCGTAYEDKEDLSSNCPGPTSADH 258
The following BLAST results are available for this feature:
BLAST of TCONS_00017689-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPT113.856e-5640.23G patch domain-containing protein 11 OS=Homo sapie... [more]
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