TCONS_00017488-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017488-protein
Unique NameTCONS_00017488-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length173

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017488-protein ID=TCONS_00017488-protein|Name=TCONS_00017488-protein|organism=Clytia hemisphaerica|type=polypeptide|length=173bp
SILFQRGLYPMESFDRKIAYDVPVFVSTNTDLNDYLHKFIEQMKDWLVKK
TIQRIVLVITSVAKKVDVERWTFNIECDKTANETTEQTTKPVKEVRKEMQ
AVIKQIVSTVTFLPYLDERCTFDLLVYTDADSEVPALWEDGEEHYISNAE
EVKLKSFSTLLHKVDMAVCYKVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009787XLOC_009787Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017488TCONS_00017488Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003511HORMA_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003511HORMA domainPFAMPF02301HORMAcoord: 1..147
e-value: 3.4E-17
score: 62.7
IPR003511HORMA domainPROSITEPS50815HORMAcoord: 1..168
score: 38.14
IPR003511HORMA domainSUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 1..172
NoneNo IPR availableGENE3D3.30.900.10coord: 1..173
e-value: 1.5E-49
score: 167.7

Blast
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BLAST of TCONS_00017488-protein vs. Swiss-Prot (Human)
Match: MD2L1 (Mitotic spindle assembly checkpoint protein MAD2A OS=Homo sapiens GN=MAD2L1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.812e-57
Identity = 81/172 (47.09%), Postives = 124/172 (72.09%), Query Frame = 0 
Query:    1 SILFQRGLYPMESFDRKIAYDVPVFVSTNTDLNDYLHKFIEQMKDWLVKKTIQRIVLVITSVAKKVDVERWTFNIECDKTANETTEQTTKPVKEVRKEMQAVIKQIVSTVTFLPYLDERCTFDLLVYTDADSEVPALWEDGEEHYISNAEEVKLKSFSTLLHKVDMAVCYKV 172
            SIL+QRG+YP E+F R   Y + + V+T+ +L  YL+  +EQ+KDWL K ++Q++V+VI+++     +ERW F+IECDKTA + +    K  K ++ E+++VI+QI +TVTFLP L+  C+FDLL+YTD D  VP  WE+    +I+N+EEV+L+SF+T +HKV+  V YK+
Sbjct:   30 SILYQRGIYPSETFTRVQKYGLTLLVTTDLELIKYLNNVVEQLKDWLYKCSVQKLVVVISNIESGEVLERWQFDIECDKTAKDDSAPREKSQKAIQDEIRSVIRQITATVTFLPLLEVSCSFDLLIYTDKDLVVPEKWEESGPQFITNSEEVRLRSFTTTIHKVNSMVAYKI 201
The following BLAST results are available for this feature:
BLAST of TCONS_00017488-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MD2L14.812e-5747.09Mitotic spindle assembly checkpoint protein MAD2A ... [more]
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