TCONS_00017276-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017276-protein
Unique NameTCONS_00017276-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length725

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017276-protein ID=TCONS_00017276-protein|Name=TCONS_00017276-protein|organism=Clytia hemisphaerica|type=polypeptide|length=725bp
MIYLPRRPYVIRRHKKQTEKPTNPDVPDPSAPEPAPEPVPEPAPEPAPEL
APEPAPEIAPETAPEPAPNTGRGLSIILIGPVEPTNPDDNLEDPSAPGLP
TGPDAPIGPVEPTNPDAPIDPVEPTNPDAPIDPVEPINPDVPIDPVEPTN
PDAPIDPVEPTNPDAPIDPVEPINPDDNLEDPSAPGLPTGPDAPIDPVEP
INPDDNLEDPSVPGLPTGPDAPIDPVEPINPDVPIDPVEPINPDDNLEDP
SVPGLPTGPDAPIDPVEPINPDVPIDPVEPINPDVPIDPVEPINPDAPID
PVEPINPDDNLEDPSAPGLPTGPDVPIGPVEPTNPDVPIDPVEPINPDDN
LEDPTVPELPTGPDVPISPVEPTNPDVPIDPVEPINPDDNLEDPTVPELP
TGPDVPISPVEPINPDDNLEDPSVPGLPTGPDVPIDPVEPINPDDNLEDP
SAPGLPTGPDVPISPVEPTNPDVPIDPVEPTNPDDNLEDPSDPGLPTGPD
VPIDPVEPTNPDDNLEDPSDPGLPTGPDVPIDPVEPINPDEPNLEDPFDE
PDCDSLSHPEPSGERPADLLIDECFERHNMYRFRHTDNLLSWDHMLQSSA
QLYAEQLAQTERFEHSEQPGIGENLYFAFNPVGVKREGNCNRALDLWYDE
IENYDFGSGTSLNGKVIGHFTQMVWATTTKIGIGMAINGDGTKIYVVAQY
SPPGNFIGQYTEQVKPLRCAIPLPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009666XLOC_009666Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017276TCONS_00017276Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 643..656
score: 34.14
coord: 590..608
score: 36.34
coord: 667..683
score: 52.26
coord: 695..708
score: 45.49
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 590..608
score: 37.83
coord: 666..685
score: 58.75
coord: 641..656
score: 24.22
IPR014044CAP domainSMARTSM00198SCP_3coord: 569..708
e-value: 2.4E-35
score: 133.4
IPR014044CAP domainGENE3D3.40.33.10coord: 548..713
e-value: 2.6E-37
score: 128.2
IPR014044CAP domainPFAMPF00188CAPcoord: 575..700
e-value: 1.2E-21
score: 77.7
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 571..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..566
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 668..678
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 570..706
e-value: 8.63799E-48
score: 163.92

Blast
[Close]
BLAST of TCONS_00017276-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 2.421e-19
Identity = 58/160 (36.25%), Postives = 79/160 (49.38%), Query Frame = 0 
Query:  563 GERPADLLIDECFERHNMYRFRHTDNLLSWDHMLQSSAQLYAEQLAQTERFEHSEQPG---IGENLYFA-FNPVGVKREGNCNRALDLWYDEIENYDFGSGTSLNGKVIGHFTQMVWATTTKIGIGMAINGDGTKIYVVAQYSPPGNFI--GQYTEQVKP 716
            G+  +    +E  + HN YR +H    L     L   AQ Y+E LA T   +HS +      GENL +A ++  G           D WY EI+NY+F      +G   GHFT MVW  T K+G+G A   DG+  +VVA+Y P GN +  G + E V P
Sbjct:    2 GKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTG-------KEVADRWYSEIKNYNFQQPGFTSGT--GHFTAMVWKNTKKMGVGKASASDGSS-FVVARYFPAGNVVNEGFFEENVLP 151
The following BLAST results are available for this feature:
BLAST of TCONS_00017276-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR12.421e-1936.25Golgi-associated plant pathogenesis-related protei... [more]
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