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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00016719-protein ID=TCONS_00016719-protein|Name=TCONS_00016719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=770bp
MKIQSTLIPLIVVIPLMSCFVFKDYEDDYPLNVITVWGQNYASKKIGVRE
PELETLCTNSPYDVIIIGYVTRFFDTINSHTQYPGMDFSIHCDTSNTMNG
IQCPDIQNAIETCHRNRKKVILGIGGANALEEFTTFTDGIQAKRFASNVW
NLFLGGQTDASIRPFGNEVLDGINIELGHGQSQYMNVFMQRLHEFRTAQA
QVQDTLITFSSKCSYPDAYLGPDPGKPLSDALATELIDQIYVHFTQSACC
VIGSPGFTASMQKWNMLSAKTKTDLALGFASSRYAVENKNCFNSGNRVAE
AIKPWQQRNPYLNGVEIIDNSFDIHNRRRYTFTQSIKTYYRAPEPQPLPE
IRPTPPIQIQQPPQPALPSTPYQQQSPTYQQHAPVYQQQMPTYQQPAPIY
QQPAPVIQPIVSIPVTPLPPTDPPEEEEEVVEEEPPIDPRPDLVATTLPP
EVVQPEPDTETVDTEVIDHELPSPVANETDNLIIDSSTEGKIGHEEEQEE
TVDEKIEKEHEEVEKEHERIEEEHLEKEEEEPVVLEPVGPEEEEEVLVST
RPPATRAPPLNPDLAAGRIPPNWDFAQAAEIQKKKRAHCKGNFSNGRWQL
KCATSRVYHPPPPSPVNKKKGVKITFKGPFKPGYIPNTKAHHNKHRKKKT
KKAKHSTKSKKHLNAKRVKLHKHVQKLKHKKTQRKIEPKETFKPSYIPKT
QQKRKKKHHRRHRKQKIRHNLQHAKHHIKKFRKRKHDRKNRKTLRKDEKS
SFKPKYIPVTKENKEFFRGL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001223 | Glyco_hydro18_cat |
| IPR017853 | Glycoside_hydrolase_SF |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0005975 |
carbohydrate metabolic process |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 496..530 |
| None | No IPR available | GENE3D | 3.20.20.80 | | coord: 31..467
e-value: 5.7E-22
score: 78.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 606..755 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 344..381 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 487..569 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 416..461 |
| IPR001223 | Glycoside hydrolase family 18, catalytic domain | PFAM | PF00704 | Glyco_hydro_18 | coord: 59..230
e-value: 2.0E-9
score: 37.5 |
| IPR017853 | Glycoside hydrolase superfamily | SUPERFAMILY | 51445 | (Trans)glycosidases | coord: 33..328 |
Blast
The following BLAST results are available for this feature:
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