TCONS_00014904-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014904-protein
Unique NameTCONS_00014904-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length416

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014904-protein ID=TCONS_00014904-protein|Name=TCONS_00014904-protein|organism=Clytia hemisphaerica|type=polypeptide|length=416bp
MAMRQPACVIDNGTGYTKMGFAGNTEPQYIIPSAIAVKESAKVGGKSTSF
KGVDDLDFYIGDEAIDRPTYGTKWPIRHGICEDWDLMERFWEQCIFKYLR
AEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAAS
WTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITF
FIQQLLKEREIGIPPEQSMETAKAIKERFCYTCPDIVKEFTKYDTDPAKW
IKSYEGQNHITKKKFDIDVGYERFLGPEIFFHPEFSNPDFSTSISETVDS
AIQNCPIDVRRGLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDQRLKASEE
ISGGRIKPKPIDCAVITHSMQRYAVWFGGSMLASTPEFYQVCHTKAQYDE
YGPSIARHNPVFGTMS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008333XLOC_008333Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014904TCONS_00014904Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR020902Actin/actin-like_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPRINTSPR00190ACTINcoord: 26..35
score: 29.69
coord: 66..88
score: 46.62
coord: 120..133
score: 63.1
IPR004000Actin familySMARTSM00268actin_3coord: 5..411
e-value: 1.2E-175
score: 599.5
IPR004000Actin familyPFAMPF00022Actincoord: 5..233
e-value: 1.1E-56
score: 192.2
NoneNo IPR availableGENE3D3.30.420.40coord: 178..208
e-value: 1.5E-12
score: 46.6
NoneNo IPR availableGENE3D3.30.420.40coord: 272..356
e-value: 7.6E-22
score: 76.6
NoneNo IPR availableGENE3D3.90.640.10coord: 209..271
e-value: 4.4E-21
score: 74.2
NoneNo IPR availableGENE3D3.30.420.40coord: 357..409
e-value: 3.8E-16
score: 58.7
NoneNo IPR availableGENE3D3.30.420.40coord: 1..177
e-value: 1.2E-58
score: 197.0
NoneNo IPR availableCDDcd00012NBD_sugar-kinase_HSP70_actincoord: 9..194
e-value: 7.88192E-13
score: 64.5323
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 5..153
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 160..411
IPR020902Actin/actin-like conserved sitePROSITEPS01132ACTINS_ACT_LIKEcoord: 109..121

Blast
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BLAST of TCONS_00014904-protein vs. Swiss-Prot (Human)
Match: ARP3 (Actin-related protein 3 OS=Homo sapiens GN=ACTR3 PE=1 SV=3)

HSP 1 Score: 720.694 bits (1859), Expect = 0.000e+0
Identity = 351/418 (83.97%), Postives = 378/418 (90.43%), Query Frame = 0 
Query:    1 MAMRQPACVIDNGTGYTKMGFAGNTEPQYIIPSAIAVKESAKVGGKSTS--FKGVDDLDFYIGDEAIDRPTYGTKWPIRHGICEDWDLMERFWEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFIQQLLKEREIGIPPEQSMETAKAIKERFCYTCPDIVKEFTKYDTDPAKWIKSYEGQNHITKKKFDIDVGYERFLGPEIFFHPEFSNPDFSTSISETVDSAIQNCPIDVRRGLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDQRLKASEEISGGRIKPKPIDCAVITHSMQRYAVWFGGSMLASTPEFYQVCHTKAQYDEYGPSIARHNPVFGTMS 416
            MA R PACV+D GTGYTK+G+AGNTEPQ+IIPS IA+KESAKVG ++     KGVDDLDF+IGDEAI++PTY TKWPIRHGI EDWDLMERF EQ IFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT+FIQQLL++RE+GIPPEQS+ETAKA+KER+ Y CPD+VKEF KYDTD +KWIK Y G N I+KK+F IDVGYERFLGPEIFFHPEF+NPDF+  ISE VD  IQNCPIDVRR LYKN+VLSGGSTMFRDFGRRLQRDLKR VD RLK SEE+SGGR+KPKPID  VITH MQRYAVWFGGSMLASTPEFYQVCHTK  Y+E GPSI RHNPVFG MS
Sbjct:    1 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS 418
The following BLAST results are available for this feature:
BLAST of TCONS_00014904-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARP30.000e+083.97Actin-related protein 3 OS=Homo sapiens GN=ACTR3 P... [more]
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