TCONS_00013994-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013994-protein
Unique NameTCONS_00013994-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1910

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013994-protein ID=TCONS_00013994-protein|Name=TCONS_00013994-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1910bp
MSGLFTSCLFCLLIVVFCLQNASANEPKQDVAKWKTGADGLVYLVNNHKL
AWEDAKQFCEKRSGKLVVVPNEHVRESLKDLLRNQEDALYWTGLSEDLFK
KWAWEEGGGATPFTDWAVGQPYDEDGVPGCGVVDVHAKWRVSHCETERRS
VCQKADNGLDDEESEVTNSERLQAEQSGKRKSKVPLHMTTNHKLFKRGFI
PRPYILDIKPTFHIRHKFEENDFIRRNRVPTRHSGTRKLRINGRPYNAKR
SQTIQSKSNLPQQGNEFDFWIRERLGDNDMELLQQNLAEFTKDTSKGTSK
IKSLEKSSSSLPQTGNRRSPPTEAKIKVYGGTSKIGAGGEYCVLPFRYNS
EVHRNCLPTKDGRKMWCSLSSNYDRDALWAYCDGDIEDPKASSSGSKKHI
VAPKNETSSGRIEGNEIKEMLGTVLDSEGASHNEKRKILKGIIEKQNGGE
GNANWQGTQQTSDPLFYEMSDTLEDEEEKLLSEKSDWKPSNDMLAKKNGT
FILPKVTSEGKEFSDNKIKALFANKHKEDKAKQKTEADKKAMHSEHTIKH
ILNNYALNDSGWGEDPTVNKFAPDGEEKNKPSDAVTEKITLAPTANDKAT
ENMSMDKLTKTKSFDIMDEEIKERVNKGEEEETAILSQENEVLGHHSGNP
TNLENNDSKSMKNKGFVMVAQDTTSHKDQLEADGSGKSFTKNKKLSRLNH
NVGFKDTDLTSFKITKGSSGRNNNKGKLSFSRDEDKPRNGHSTKHLLESM
QGLSGRQPEPASGLEHSESKALKHSEDTDANGVGDPLNALNDVSTTSFNG
LSDNDIKKVANITENENADISYDLLKIDKGNRENRVSDKPGNRGTMVLTP
EEMEEVKEKRKQKLKEEKERLSLKMEGEKGSDERMTENQEKVLMKVDEEE
KLKDVQKEIDMKAEEQGANDPVKMKEDKKKMSTKLDKNEKGNSLEMGNDK
NALKEATKDSEEKQKGDLKKIEESKGLDLSEEVKNKLNEETKKEQEKNRK
LTQNQETEGGQKVPSKAEHKQPLGVLKVAQNLLLNAALAANNKQKTAANR
TNAFLKEYFMRYGNHTFDKHLKEANPKNGKEKQAASEGSATVDGQPITQS
STNPHDTNRMIKAESPEGDSFCVFPFVYKGKTYFDCTSDDDPKGKLWCST
TPTHNYDKIPKKGYCKLNRRDSILARKTRTTGRSSTSTGRTTAKLEAYTQ
KYQAMKTALSNAPHMPKKQILTDQKKPCVFPFVYKGESYFDCTTEDDTKS
WCSLTKSYDQDLKKGYCSKTTDPQHQSSDTREVDEEEVLALQQQQALSNK
LDPSATVADQKLAGAAVTDDDELNNGIVNEAVKQRLAEKMRAKSNPFDKK
PQLLDPSNPASLPELQNPLNPLHPTTSITSQPLTQPTLSKPDLLLEAKQP
TTLQSVGTTVDEKLHQQQIQERLANVNPQAIKEVFTENGGQCVFPFIYNG
KSYFDCTSDDDISGKKWCSTKYKNFDLRPEGKGYCVDTTTESGRLLHAQI
KMERTKMEVTEQQAQAEKLLPDPLNPESTPEKPIQTEDGKECVFPFYYKG
QKYYDCIDIDEPSGKYWCSTVETSVPVNGQSQIAPVKGYCMDERNPGLIS
STMPSNTNRLGALNTNPLDPNRPATDPEKMAEQDRLREALDPYKNLKDPL
LANASPEEKLKAKIDAEKIRNGEPVTNNPDPEKALQLEQSIQNGNPFERR
AIRTETGAPCVFPFIHNSKSYYDCTSDDEPTEKFWCSTTNNFDRDERKGY
CVDPRNKNAGGTTSEAQMKLDALRKLQRASNPLNEKISVRHKTLNSVNQP
LSRKDYLHLAGEELVSSDSGLKIYGGNSKKSARCXVSSDSGLKIYGGNSK
KSARCAIPFIYNRKSYFSCVNFTNPTRKGESWCATSHNFDKDMKWGLCCT
QSKCGKDWAD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007820XLOC_007820Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013994TCONS_00013994Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR000562FN_type2_col-bd
IPR016186C-type_lectin-like/link
IPR013806Kringle-like
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 977..1004
NoneNo IPR availableCOILSCoilCoilcoord: 895..915
NoneNo IPR availableCOILSCoilCoilcoord: 854..881
NoneNo IPR availablePRINTSPR00013FNTYPEIIcoord: 1707..1716
score: 64.4
coord: 1735..1750
score: 51.0
coord: 1718..1730
score: 31.79
NoneNo IPR availableCDDcd00037CLECTcoord: 43..154
e-value: 2.86242E-21
score: 91.5273
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 30..153
e-value: 4.3E-17
score: 72.8
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 49..154
e-value: 2.2E-13
score: 50.8
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 38..153
score: 18.368
IPR000562Fibronectin, type II, collagen-bindingSMARTSM00059FN2_2coord: 1847..1898
e-value: 7.2E-8
score: 42.1
coord: 1114..1165
e-value: 6.2E-12
score: 55.7
coord: 1435..1485
e-value: 5.2E-9
score: 45.9
coord: 1221..1267
e-value: 1.8E-15
score: 67.4
coord: 1535..1574
e-value: 8.9E-7
score: 37.2
coord: 335..382
e-value: 3.3E-8
score: 43.3
coord: 1703..1751
e-value: 5.1E-16
score: 69.2
IPR000562Fibronectin, type II, collagen-bindingGENE3D2.10.10.10coord: 326..383
e-value: 5.9E-13
score: 48.1
IPR000562Fibronectin, type II, collagen-bindingGENE3D2.10.10.10coord: 1531..1579
e-value: 9.1E-13
score: 47.3
coord: 1698..1752
e-value: 2.4E-17
score: 62.0
coord: 1431..1486
e-value: 1.0E-13
score: 50.4
coord: 1107..1166
e-value: 8.0E-15
score: 53.9
coord: 1214..1268
e-value: 2.6E-16
score: 58.7
IPR000562Fibronectin, type II, collagen-bindingGENE3D2.10.10.10coord: 1842..1898
e-value: 6.2E-14
score: 51.2
IPR000562Fibronectin, type II, collagen-bindingPFAMPF00040fn2coord: 1122..1165
e-value: 3.0E-13
score: 49.7
coord: 342..382
e-value: 4.6E-12
score: 45.9
coord: 1710..1751
e-value: 1.4E-13
score: 50.8
coord: 1228..1267
e-value: 3.6E-14
score: 52.6
coord: 1442..1472
e-value: 1.1E-11
score: 44.7
coord: 1855..1898
e-value: 3.7E-12
score: 46.2
coord: 1542..1572
e-value: 9.6E-10
score: 38.5
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS00023FN2_1coord: 342..382
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 1850..1900
score: 15.236
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 1705..1753
score: 18.172
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 337..384
score: 14.882
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 1437..1487
score: 14.372
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 1537..1592
score: 13.563
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 1223..1269
score: 17.153
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 1117..1167
score: 16.211
IPR000562Fibronectin, type II, collagen-bindingCDDcd00062FN2coord: 1226..1267
e-value: 5.33592E-15
score: 71.1826
IPR000562Fibronectin, type II, collagen-bindingCDDcd00062FN2coord: 1536..1570
e-value: 1.5122E-10
score: 58.471
IPR000562Fibronectin, type II, collagen-bindingCDDcd00062FN2coord: 1436..1485
e-value: 8.57865E-12
score: 61.9378
IPR000562Fibronectin, type II, collagen-bindingCDDcd00062FN2coord: 1122..1165
e-value: 1.53544E-15
score: 72.7234
IPR000562Fibronectin, type II, collagen-bindingCDDcd00062FN2coord: 337..382
e-value: 5.20273E-11
score: 59.6266
IPR000562Fibronectin, type II, collagen-bindingCDDcd00062FN2coord: 1704..1751
e-value: 1.05779E-16
score: 76.1902
IPR000562Fibronectin, type II, collagen-bindingCDDcd00062FN2coord: 1851..1898
e-value: 7.50573E-12
score: 61.9378
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 20..162
e-value: 2.6E-22
score: 78.9
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 1434..1472
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 1850..1899
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 1115..1166
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 1220..1268
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 1703..1753
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 336..383
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 1534..1571
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 41..155

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013994-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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