TCONS_00013908-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013908-protein
Unique NameTCONS_00013908-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013908-protein ID=TCONS_00013908-protein|Name=TCONS_00013908-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MEMGKKKVQEEFERQLKAFDGFECDILIAEYISSVEEAVWAVEVLKQRNL
PIAVTLSISHLGDFNDVTPEECGKRLKEAGADIIGTNCRFAPIDTLDAAI
MMKNGIQETGMSSHYVCQPNGWELECKNKHGHSEEPECPYAMESKTITRW
DAQEFARRAYEAGIRYIGGCCGMEPYHIRAIAEELREERGRLPLNSRGVN
GSALRDHPLESMRKKANKEFWMNLKKRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007762XLOC_007762Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013908TCONS_00013908Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003726HCY_dom
IPR017226Betaine-hCys_S-MeTrfase_BHMT
Vocabulary: Molecular Function
TermDefinition
GO:0047150betaine-homocysteine S-methyltransferase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0009086methionine biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009086 methionine biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0047150 betaine-homocysteine S-methyltransferase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003726Homocysteine-binding domainGENE3D3.20.20.330coord: 1..227
e-value: 7.7E-37
score: 126.6
IPR003726Homocysteine-binding domainPFAMPF02574S-methyl_transcoord: 5..184
e-value: 9.9E-22
score: 77.9
IPR003726Homocysteine-binding domainPROSITEPS50970HCYcoord: 1..185
score: 18.689
IPR003726Homocysteine-binding domainSUPERFAMILY82282Homocysteine S-methyltransferasecoord: 6..221
IPR017226Betaine-homocysteine S-methyltransferase, BHMTPIRSFPIRSF037505BHMTcoord: 2..227
e-value: 3.0E-60
score: 202.3

Blast
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BLAST of TCONS_00013908-protein vs. Swiss-Prot (Human)
Match: BHMT2 (S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Homo sapiens GN=BHMT2 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.226e-71
Identity = 109/220 (49.55%), Postives = 142/220 (64.55%), Query Frame = 0 
Query:    7 KVQEEFERQLKAFDGFECDILIAEYISSVEEAVWAVEVLKQRNLPIAVTLSISHLGDFNDVTPEECGKRLKEAGADIIGTNCRFAPIDTLDAAIMMKNGIQETGMSSHYVCQPNGWELECKNKHGHSEEPECPYAMESKTITRWDAQEFARRAYEAGIRYIGGCCGMEPYHIRAIAEELREERGRLPLNS--RGVNGSALRDHPLESMRKKANKEFWMNL 224
            ++++ F +QL+ F     D LIAEY   VEEAVWAVEVLK+ + P+AVT+ I   GD +D+TP EC  RL +AGA I+G NCRF P  +L    +MK G++  G+ +H + QP G+      K G  + PE P+ +ES+  TRWD Q++AR AY  G+RYIGGCCG EPYHIRAIAEEL  ERG LP  S   G  GS L  H    +R +A +E+W NL
Sbjct:  127 RIKKLFRQQLEVFAWKNVDFLIAEYFEHVEEAVWAVEVLKESDRPVAVTMCIGPEGDMHDITPGECAVRLVKAGASIVGVNCRFGPDTSLKTMELMKEGLEWAGLKAHLMVQPLGFHAPDCGKEGFVDLPEYPFGLESRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWIRARARREYWENL 346
The following BLAST results are available for this feature:
BLAST of TCONS_00013908-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BHMT25.226e-7149.55S-methylmethionine--homocysteine S-methyltransfera... [more]
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