TCONS_00013327-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013327-protein
Unique NameTCONS_00013327-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1024

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013327-protein ID=TCONS_00013327-protein|Name=TCONS_00013327-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1024bp
MNYDRTVELQRWPGIGFGFSVIGGSDTHIPPMICALVRDSPALMSNQIYV
GDVLCEVNGISVATLETKQVVDLIRNCKKNIVLTLKEDRLAKLKARPFLA
EGTLIEPPKSVSQGNENNTHDRVPPSSQQTQQPRVAEIRQTTPTQHHPPP
QQQRVQSSRKPNNHIDAHNALQGRTRTVGSPKSYEQGTDGSYFYRGANNT
KPTNLDFYSSGPNSFKEPSRGSPGAYSTGSSSRHSEAAASSKSVSPKSNR
SDKSSKSSMTTATAHLYNLEDLPRSPRYYTQQTVPEPTFNSMAKKDKYAT
ENYHSQNYVQEHGYVEMSYKKQKTPSPTLSNHVKSPASSKAPSSPRTTPV
SSIHRHTQGRKYNSYDKLHVESPDAGRKNRTDDSKYRAQKSVPYTKKEGQ
FDFSDGCVQSMQRPPDDNLLLPYTKASSRPYSNPELDVELDKHRLDSNAQ
TQHLNVTSPPPRQMRQNKNKQSNHSSPNIYDDSQWCMTSEQKELSLTPCT
LSSHSLSKISTSNSRNGDFDERIHSPLHVTLNNTSMASSSTVSPMSYLAE
SDVSSSVSSNTKEEVSPADIASRLFTLNGYKDSDIAPLLGKNSDFSQQIC
REYLRFFNFEGIALDEAVRIFLAKFPLTGETQERERILIHFSKRYNECNL
TNDMDEDGVHTLVCSLMLLNTDLHGQSITNKMTPNDFVTNLSGLNNGKDF
PKEYLKTLYNSIKNKEIKFAQNEAPPSPKHKRNNSGNPFIELKVESSDAV
VYEGLVYRKSVMDPGGRRTPLMRRNWRPYYCVLKGLVLLSYKPDNMNGHE
AHSIGIHHALAGYAKDYKKRMFVFKLISADWSVYYLQVKSQDEVKIWMDS
INVSAALLSSPPLPAPVGSSVKFQRPVMPVSRTRLEPAEQLSHHMDKVTQ
SDEEYKIHIEYTPEANNKYYTDWENKKDYLEYEVKRFKAYVSVLTTPKLS
PIRQKILATIPQASKMNTLPSPGRQKSRLANAVNIPRSSSMHSLTSGSNS
LTPTTQRHIIEDNRKGFGLSGTPP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007445XLOC_007445Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013327TCONS_00013327Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR000904Sec7_dom
IPR001478PDZ
IPR023394Sec7_alpha_orthog
IPR011993PH_dom-like
Vocabulary: Biological Process
TermDefinition
GO:0032012regulation of ARF protein signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005086ARF guanyl-nucleotide exchange factor activity
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032012 regulation of ARF protein signal transduction
molecular_function GO:0005086 ARF guanyl-nucleotide exchange factor activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 750..858
e-value: 2.7E-13
score: 60.2
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 749..856
score: 11.145
IPR000904Sec7 domainSMARTSM00222sec7_5coord: 531..717
e-value: 1.4E-47
score: 174.0
IPR000904Sec7 domainPFAMPF01369Sec7coord: 555..717
e-value: 9.4E-38
score: 129.7
IPR000904Sec7 domainPROSITEPS50190SEC7coord: 545..715
score: 24.119
IPR000904Sec7 domainSUPERFAMILY48425Sec7 domaincoord: 562..721
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 15..89
e-value: 5.4E-11
score: 52.5
IPR001478PDZ domainPFAMPF00595PDZcoord: 9..85
e-value: 1.1E-9
score: 38.4
IPR001478PDZ domainPROSITEPS50106PDZcoord: 6..89
score: 15.36
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 5..88
NoneNo IPR availableGENE3D1.10.220.20coord: 541..608
e-value: 8.6E-4
score: 19.0
NoneNo IPR availablePFAMPF15410PH_9coord: 752..856
e-value: 9.2E-24
score: 84.0
NoneNo IPR availableGENE3D2.30.42.10coord: 3..165
e-value: 6.9E-16
score: 57.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 985..1024
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..482
NoneNo IPR availableCDDcd00171Sec7coord: 566..717
e-value: 1.79734E-57
score: 195.519
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 5..86
e-value: 9.90592E-18
score: 79.1478
IPR023394Sec7 domain, alpha orthogonal bundleGENE3D1.10.1000.11coord: 609..726
e-value: 1.4E-39
score: 134.1
IPR011993PH domain-likeGENE3D2.30.29.30coord: 738..861
e-value: 1.6E-22
score: 79.2
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 750..878

Blast
[Close]
BLAST of TCONS_00013327-protein vs. Swiss-Prot (Human)
Match: PSD1 (PH and SEC7 domain-containing protein 1 OS=Homo sapiens GN=PSD PE=1 SV=2)

HSP 1 Score: 335.495 bits (859), Expect = 5.627e-99
Identity = 173/414 (41.79%), Postives = 249/414 (60.14%), Query Frame = 0 
Query:  556 SVSSNTKEEVSPAD-IASRLFTLNGYKDSDIAPLLGKNSDFSQQICREYLRFFNFEGIALDEAVRIFLAKFPLTGETQERERILIHFSKRYNECNLTNDMDEDGVHTLVCSLMLLNTDLHGQSITNKMTPNDFVTNLSGLNNGKDFPKEYLKTLYNSIKNKEIKFAQNE----------APPSPK------HKRNNSGNPFIELKVESSDAVVYEGLVYRKSVMDPGGRRTPLMRRNWRPYYCVLKGLVLL----SYKPDNM--NGHEAHSIGIHHALAGYAKDYKKRMFVFKLISADWSVYYLQVKSQDEVKIWMDSINVSAALLSSPPLPAPVGSSVKFQRPVMPVSRTRLEPAEQLSHHMDKVTQSDEEYKIH--IEYTPEANNKYYTDWENKKDYLEYEVKRFKAYVSVL 944
            ++S+  K ++  A  +A RL+ L+G++ +D+A  LGKN+DFS+ +  EYL+FF F G+ LD+A+R+FL +  L GETQERER+L HFS+RY +CN      EDG HTL C+LMLLNTDLHG +I  +MT  DF+ NL GLN+G DFP+E LK LY+SIKN+++++A +E          A P+PK          +  +PF++L  E   AV   G + RK   DP  R+TP  +R W+ ++ +LKG++L      YKP          ++I IHHALA  A DY KR  VF L +ADW V+  Q  S ++++ W+  INV AA+ S+PP PA V S  KF RP++P + TRL   EQ+  H  K+     E + H   +   +   K   +   K+ YLE+E  R+  Y ++L
Sbjct:  546 TLSNGQKADLEAAQRLAKRLYRLDGFRKADVARHLGKNNDFSKLVAGEYLKFFVFTGMTLDQALRVFLKELALMGETQERERVLAHFSQRYFQCNPEALSSEDGAHTLTCALMLLNTDLHGHNIGKRMTCGDFIGNLEGLNDGGDFPRELLKALYSSIKNEKLQWAIDEEELRRSLSELADPNPKVIKRISGGSGSGSSPFLDLTPEPGAAVYKHGALVRKVHADPDCRKTPRGKRGWKSFHGILKGMILYLQKEEYKPGKALSETELKNAISIHHALATRASDYSKRPHVFYLRTADWRVFLFQAPSLEQMQSWITRINVVAAMFSAPPFPAAVSSQKKFSRPLLPSAATRLSQEEQVRTHEAKLKAMASELREHRAAQLGKKGRGKEAEEQRQKEAYLEFEKSRYSTYAALL 959
The following BLAST results are available for this feature:
BLAST of TCONS_00013327-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSD15.627e-9941.79PH and SEC7 domain-containing protein 1 OS=Homo sa... [more]
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