TCONS_00012546-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012546-protein
Unique NameTCONS_00012546-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length510

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012546-protein ID=TCONS_00012546-protein|Name=TCONS_00012546-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
MSTRQVLQVFEQYQKARTTFVQTIAELATRPQNIEILQNAGVMALLRPLL
LDVVPTVQQTAALALGRLANYNDDLAEAVVKGDILPQLVYSLAEQNRFYK
KAAAFVLRAVAKHSPELAQAVVDCGALEALVICLEEFDPGVKESAAWALG
YVARHNAELSQAVVDAGAVPLLVLCIQEPELDLKRIAASALSDICKHSPE
LAQTVVDAGAVSHLAQMILNDDAKLKRQVFSALSQIAKHSVDLAEMVVEA
EIFPAVLSSLTNTDEYVKKNVAMLIREVAKHTPELSQLIVNAGGLAAVIN
YIGDSHGNILLPGVMMLGYVGAHSENLAMSVILSKGVVQLSIVLSEEKED
HIKAAAAWALGQIGRHTPEHAKAVAIANVLPKLLNCYLSTESSEDLSTKA
KKALKNVLQRCIHLPALEPLLHSAPSNILKHVVSQFSKILPHDPKARKVF
VTSGGLKKIQELKPEPGSALHEYVNTINNCYPEEIVRYYSPGYSEKLLDR
IEQYEIPAVN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007039XLOC_007039Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012546TCONS_00012546Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 282..322
e-value: 190.0
score: 3.4
coord: 156..196
e-value: 1.1E-4
score: 31.6
coord: 114..154
e-value: 2.9E-8
score: 43.5
coord: 323..365
e-value: 13.0
score: 12.5
coord: 198..238
e-value: 4.7E-5
score: 32.8
coord: 30..70
e-value: 0.0064
score: 25.7
coord: 240..280
e-value: 49.0
score: 7.9
coord: 367..409
e-value: 19.0
score: 11.1
IPR000225ArmadilloPFAMPF00514Armcoord: 114..154
e-value: 1.1E-8
score: 34.7
coord: 198..237
e-value: 1.9E-6
score: 27.6
coord: 157..195
e-value: 2.4E-6
score: 27.3
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 231..414
e-value: 6.9E-26
score: 90.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..87
e-value: 3.4E-9
score: 35.9
NoneNo IPR availableGENE3D1.25.40.150coord: 188..230
e-value: 5.0E-10
score: 38.9
coord: 88..144
e-value: 1.8E-12
score: 46.8
coord: 145..187
e-value: 9.8E-14
score: 50.9
NoneNo IPR availableCDDcd00020ARMcoord: 161..279
e-value: 9.58479E-17
score: 75.4287
NoneNo IPR availableCDDcd00020ARMcoord: 77..195
e-value: 7.20249E-22
score: 90.0663
NoneNo IPR availableCDDcd00020ARMcoord: 245..363
e-value: 2.82689E-9
score: 53.8575
NoneNo IPR availableCDDcd00020ARMcoord: 336..434
e-value: 1.54017E-5
score: 42.3016
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 14..489

Blast
[Close]
BLAST of TCONS_00012546-protein vs. Swiss-Prot (Human)
Match: SPAG6 (Sperm-associated antigen 6 OS=Homo sapiens GN=SPAG6 PE=2 SV=1)

HSP 1 Score: 857.44 bits (2214), Expect = 0.000e+0
Identity = 410/505 (81.19%), Postives = 457/505 (90.50%), Query Frame = 0 
Query:    1 MSTRQVLQVFEQYQKARTTFVQTIAELATRPQNIEILQNAGVMALLRPLLLDVVPTVQQTAALALGRLANYNDDLAEAVVKGDILPQLVYSLAEQNRFYKKAAAFVLRAVAKHSPELAQAVVDCGALEALVICLEEFDPGVKESAAWALGYVARHNAELSQAVVDAGAVPLLVLCIQEPELDLKRIAASALSDICKHSPELAQTVVDAGAVSHLAQMILNDDAKLKRQVFSALSQIAKHSVDLAEMVVEAEIFPAVLSSLTNTDEYVKKNVAMLIREVAKHTPELSQLIVNAGGLAAVINYIGDSHGNILLPGVMMLGYVGAHSENLAMSVILSKGVVQLSIVLSEEKEDHIKAAAAWALGQIGRHTPEHAKAVAIANVLPKLLNCYLSTESSEDLSTKAKKALKNVLQRCIHLPALEPLLHSAPSNILKHVVSQFSKILPHDPKARKVFVTSGGLKKIQELKPEPGSALHEYVNTINNCYPEEIVRYYSPGYSEKLLDRIEQYE 505
            MS RQVLQVFEQYQKART FVQ +AELATRPQNIE LQNAGVM+LLR LLLDVVPT+QQTAALALGRLANYNDDLAEAVVK DILPQLVYSLAEQNRFYKKAAAFVLRAV KHSP+LAQA+VDCGAL+ LVICLE+FDPGVKE+AAWAL Y+ARHNAELSQAVVDAGAVPLLVLCIQEPE+ LKRIAASALSDI KHSPELAQTVVDAGAV+HLAQMILN DAKLK Q+ SALSQ++KHSVDLAEMVVEAEIFP VL+ L + DEYVKKN + LIRE+AKHTPELSQL+VNAGG+AAVI+ IG   GN  LPG+MMLGYV AHSENLAM+VI+SKGV QLS+ LSEE EDHIKAAAAWALGQIGRHTPEHA+AVA+ N LP LL+ Y+STESSEDL  K+KKA+KN+LQ+C +LPALEP L+ AP NILKHVV QFSK+LPHD KAR++FVTSGGLKK+QE+K EPGS L EY+N+IN+CYPEEIVRYYSPGYS+ LL R++ Y+
Sbjct:    1 MSQRQVLQVFEQYQKARTQFVQMVAELATRPQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQLVYSLAEQNRFYKKAAAFVLRAVGKHSPQLAQAIVDCGALDTLVICLEDFDPGVKEAAAWALRYIARHNAELSQAVVDAGAVPLLVLCIQEPEIALKRIAASALSDIAKHSPELAQTVVDAGAVAHLAQMILNPDAKLKHQILSALSQVSKHSVDLAEMVVEAEIFPVVLTCLKDKDEYVKKNASTLIREIAKHTPELSQLVVNAGGVAAVIDCIGSCKGNTRLPGIMMLGYVAAHSENLAMAVIISKGVPQLSVCLSEEPEDHIKAAAAWALGQIGRHTPEHARAVAVTNTLPVLLSLYMSTESSEDLQVKSKKAIKNILQKCTYLPALEPFLYDAPPNILKHVVGQFSKVLPHDSKARRLFVTSGGLKKVQEIKAEPGSLLQEYINSINSCYPEEIVRYYSPGYSDTLLQRVDSYQ 505
The following BLAST results are available for this feature:
BLAST of TCONS_00012546-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPAG60.000e+081.19Sperm-associated antigen 6 OS=Homo sapiens GN=SPAG... [more]
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