TCONS_00011826-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011826-protein
Unique NameTCONS_00011826-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length374

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011826-protein ID=TCONS_00011826-protein|Name=TCONS_00011826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
MSMKHSRSPDPLDDTPYLIPPPDDEARKCGCKNETFRLAIGLVLVFMIAI
SWTGATQFGRSVYDVNFDAPYLTAWFVMCFQCVIFPLSLLAFVGRRKKLR
EYWNKSMELFGPDGLTLRGFLKFGLIYALPLNIISILANYLFYRALKSLN
PSTVASIFSAQSAFVYALSIIFLKEKFFFTRLTSVLLSVGGIVLMGHGEG
FQNASTVGVILTAIAALCAAIFQVAFKRSFGFPATGQVAVIVTYIGLTNL
VVLPYFIFIFKHVGWEHFIWSALPWKLLIGTALLGLMFNFLLIFGVAYTY
PLFISIGNLIGVPMNAAIDAIFRGEDFDAFKIAAFFIIVTGFMLLLIPIS
RIEYFEREVCCKKCSKRNDEEDLE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006644XLOC_006644Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011826TCONS_00011826Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 40..195
e-value: 1.0E-8
score: 35.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 125..199

Blast
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BLAST of TCONS_00011826-protein vs. Swiss-Prot (Human)
Match: S35F4 (Solute carrier family 35 member F4 OS=Homo sapiens GN=SLC35F4 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 2.770e-49
Identity = 122/377 (32.36%), Postives = 194/377 (51.46%), Query Frame = 0 
Query:    4 KHSRSPDPLDDTPYLIPPPDD--EARKCGCKNETFRLAIGLVLVFMIAISWTGATQFGRSVYDVNFDAPYLTAWFVMCFQCVIFPL---SLLAFVGRRKKLREYWNKSMELFGPDGLTLRGFLKFGLIYALPLNIISILANYLFYRALKSLNPSTVASIFSAQSAFVYALSIIFLKEKFFFTRLTSVLLSVGGIVLMGHGEGFQNASTVGVILTAIAALCAAIFQVAFKRSFGFPATGQVAVIVTYIGLTNLVVL---PYFIFIFKHVGWEHFIWSALPWKLLIGTALLGLMFNFLLIFGVAYTYPLFISIGNLIGVPMNAAIDAIFRGEDFDAFKIAAFFIIVTGFMLLLIPISRIEYFEREVCCKKCSKRNDEED 372
            + +RS D    T       ++  +AR   C +   +   GL+++  ++ SW G TQ  +  Y  NF  P+   WF   +  + FP+     LA    ++   + + +   +FG DGLTL+ FLK       P +I+  L NYL+  ALK L  + V+++F    AFV+ LS I LK++F   R+ + ++++ GIV+M + + F   S +GV     +A  +A+++V FK   G    G+ A  V+ +G  NL+ +   P  ++  K   W  F  +ALPW  L G A L L FN L+  GV  TYP+ ISIG ++ VP NAA+D + +   F+  ++AA  II  GF+L+L+P    E   R +   K  K  +  D
Sbjct:  128 RQNRSADDGTQTHSENSSQENRIKARCLSCTSMVLKGIWGLLIILSVSSSWVGTTQIVKITYK-NFYCPFFMTWFSTNWNIMFFPVYYSGHLATAQEKQSPMKKFRECSRIFGEDGLTLKLFLK----RTAPFSILWTLTNYLYLLALKKLTATDVSALFCCNKAFVFLLSWIVLKDRFMGVRIVAAIMAITGIVMMAYADNFHADSIIGVAFAVGSASTSALYKVLFKMFLGSANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWSSF--AALPWGCLCGMAGLWLAFNILVNVGVVLTYPILISIGTVLSVPGNAAVDLLKQEVIFNVVRLAATIIICIGFLLMLLPEEWDEITLRFINSLKEKKSEEHVD 497
The following BLAST results are available for this feature:
BLAST of TCONS_00011826-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35F42.770e-4932.36Solute carrier family 35 member F4 OS=Homo sapiens... [more]
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