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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00009784-protein ID=TCONS_00009784-protein|Name=TCONS_00009784-protein|organism=Clytia hemisphaerica|type=polypeptide|length=554bp
MLYNEKYSTCFIFFSSENKQTNHKMNVSEKQAAFLYENEQYGEALHVFRQ
LRDVQVSKLSPKDPAIIQTQQMIGRCLYRCGRYQEALPVFQGVEEQYSRS
MRQNGKELLEAKNDLGLCYLALGGFNEALNCFFQVDDVYKKEKPDSDEEY
ITTRTNLALCMTNVGRVKEALEIYQECQEQQSALLGAEHPDVLQTQANIA
TCLLRTGKHTEALELLQKSETKQREALGEGHEASLQIRANIGKCLKEIGK
LEEAMKQNEVLADDVLTNLGDGHPLLFEVQNNLMVVYLKLEKKDEAIKIG
EECLQLQENAFGADHSELLDTLINLIACYESKGDYEATLVSQKRLETIYG
KTFGKDNPELAKLRNNIAGTLVKLKRGNEALEMFGKIEREFERQYGKNHP
SVLTIKSNKAKVYCEMEKYIDASRILKEVENVEQANKLSSLITRRELLRC
LTAAKHLTQAADVYAKLAGKGHEDFDLALAKNNYAIALLNDRKFDNALKV
FKEVEIIMEGMKMPSNHPALLNTKQNIGTTYQQLGKRDEAGKLFAYVKEM
REGK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 361..394
e-value: 210.0
score: 3.3
coord: 403..436
e-value: 220.0
score: 3.1
coord: 109..142
e-value: 35.0
score: 10.2
coord: 478..511
e-value: 210.0
score: 3.4
coord: 277..310
e-value: 1.1
score: 18.3
coord: 67..100
e-value: 120.0
score: 5.4
coord: 193..226
e-value: 25.0
score: 11.5
coord: 151..184
e-value: 46.0
score: 9.1 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 179..259
e-value: 5.1E-17
score: 61.4
coord: 305..363
e-value: 1.6E-13
score: 50.2
coord: 512..554
e-value: 4.3E-4
score: 20.0
coord: 138..178
e-value: 2.8E-9
score: 36.6
coord: 387..437
e-value: 5.4E-6
score: 26.1 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 79..137
e-value: 9.3E-8
score: 31.4 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 364..386
e-value: 0.29
score: 10.8 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 261..304
e-value: 0.036
score: 13.6 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 189..324 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 355..432
coord: 474..544 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 7..218 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 30..92
e-value: 1.1E-7
score: 32.0
coord: 360..430
e-value: 1.1E-7
score: 31.9
coord: 278..336
e-value: 2.7E-7
score: 30.7
coord: 152..219
e-value: 5.5E-15
score: 55.3 |
| None | No IPR available | GENE3D | 1.20.1250.10 | | coord: 438..510
e-value: 1.5E-4
score: 21.1 |
| None | No IPR available | GENE3D | 1.10.150.200 | | coord: 14..78
e-value: 5.5E-5
score: 22.5 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 67..310
score: 8.722 |
Blast
The following BLAST results are available for this feature:
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