TCONS_00008851-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008851-protein
Unique Name	TCONS_00008851-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1049

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008851-protein ID=TCONS_00008851-protein|Name=TCONS_00008851-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1049bp
ELQKMKTSIIISIQVFFLFIDHCSSSPYFFLNHHHAAPENNFTEIYDGSC
SSWTVIPPSKLVAGYPKMCSLETPSIIAPEGINEAKSILSLFQISVGKCT
LVDGKCREQLEVDVVITFKDNKEKFIQRALMPNWTVTESRDFKIDSTKQI
IRTINLPKNQRKITSIKLTINSKNFIGSILQVSLWTNACLQTIASHAVFP
YSVTPGYTNGTCVENAVSLLPYLKGDCTSTGYQSFLGICLCGTGYMSSGD
QCIACPSNYFKTSFGYGNCTKCGMNSYRLENSTSQNCQCKEGFVRYSSET
SEFSKPCHDWNKIDCPKDSFKINSTIDACLKCGANSFRISTDSPQNCQCR
PGFIRYKNETKMYEKACHDLKVFGKCANEKIVMAVDEVYHFTSIDINEKL
NFSCIYGQTDEAKKLNKTTVLFRKCLFSILSYSTEWQPLDLSTCGRNTKG
KTLENIDVNDIDNKTVNEFSKQISNLTSNTSLVNNEQAVQNLTKVLEKIV
DIQNTSIEVKENVLKILDNIIPINDSIIPNENKNQLLHFVDKITENIQQP
SFNYSGQNLAVSIQTWNRSQATNIKSFEDNDQIKIQFRNSPKNADISINT
TASIYLPQSTYENSQNDLQIISTAYKKDTFFSNTIEEEKTGEDWEVASFI
MSASIKGQVVEGLTTPVNMTFKVNGTKYDLPKAKCVFWDIDGNYWSTRGC
KTLVNSKNEVTCECNHLTNFAILFNVYQVDEDVLNSQEVLNYVSLIGCIL
STGCLAATLFAFSCARHKHTRRKTAQLIIINFCIALTLLLIAFMLTTKIT
ITSGVLCHTMSGVLHFLLLATFSWTATQASFLYKKTVRATRNFKGEDRRT
FYISFCLAWGLPIVVSGVTSNFTSAQFVEPVTHSCIMKGDIFIYSTIIPI
ACIILFNLIVFIMVMRKVHGHFKTRASFQQNEDKQMWKRAKATMACMVLL
GLTWSFGFMAVGDLRAPLQWLFCITNTLQGVFVFVFYVLLNDEVRKAWNS
NWTESSFTSTLVSRATNIRKLVAENGLTLVSFATKSPSPKPKHKATTET

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004969	XLOC_004969	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008851	TCONS_00008851	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000832	GPCR_2_secretin-like
IPR011641	Tyr-kin_ephrin_A/B_rcpt-like
IPR000203	GPS
IPR017981	GPCR_2-like
IPR009030	Growth_fac_rcpt_

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity
GO:0004888	transmembrane signaling receptor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway
GO:0007166	cell surface receptor signaling pathway

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity
molecular_function	GO:0004888	transmembrane signaling receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000832	GPCR, family 2, secretin-like	PRINTS	PR00249	GPCRSECRETIN	coord: 969..990 score: 27.66 coord: 809..832 score: 14.62 coord: 939..959 score: 26.8 coord: 894..919 score: 23.6 coord: 742..766 score: 23.32
IPR000832	GPCR, family 2, secretin-like	PFAM	PF00002	7tm_2	coord: 739..983 e-value: 1.0E-25 score: 90.4
IPR011641	Tyrosine-protein kinase ephrin type A/B receptor-like	SMART	SM01411	GCC2_GCC3_2	coord: 292..349 e-value: 2.0 score: 14.3 coord: 244..289 e-value: 0.26 score: 20.4
IPR000203	GPS motif	SMART	SM00303	GPS_3	coord: 681..729 e-value: 2.9E-18 score: 76.7
IPR000203	GPS motif	PFAM	PF01825	GPS	coord: 684..723 e-value: 5.3E-15 score: 55.7
IPR000203	GPS motif	PROSITE	PS50221	GPS	coord: 682..729 score: 15.434
None	No IPR available	GENE3D	2.10.50.10		coord: 307..367 e-value: 0.11 score: 12.4 coord: 241..306 e-value: 1.2E-4 score: 21.8
None	No IPR available	GENE3D	1.20.1070.10		coord: 724..1020 e-value: 5.4E-29 score: 100.6
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 735..999
IPR017981	GPCR, family 2-like	PROSITE	PS50261	G_PROTEIN_RECEP_F2_4	coord: 740..991 score: 23.347
IPR009030	Growth factor receptor cysteine-rich domain	SUPERFAMILY	57184	Growth factor receptor domain	coord: 204..308

Blast

[Close]

BLAST of TCONS_00008851-protein vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 3.581e-50
Identity = 173/657 (26.33%), Postives = 302/657 (45.97%), Query Frame = 0

Query:  374 GKCANEKIVMAVDEVYHFTSIDINEKLNFSCIYGQTDEAKKLNKTTVLFRKCLFSILSYSTEWQPLDLSTCGR----NTKGKTLENIDVNDIDNKTVNEFSKQISNLTSNTSLVNNEQAVQNLTKVL-EKIVDIQNTSIEVKENVLKILDNIIPI------NDSIIPNENKNQLLHFVDKITENIQQPSFNYSGQ-------NLAVSIQTWNRS---QATNIKSFEDNDQIKIQFRNSPKNADISINTTASIYLPQSTYEN-SQNDLQIISTAYKKDTFFSNTIEEEKTGEDWEVASFIMSASIKGQV-VEGLTTPVNMTFKVNGTKYDLPKAKCVFWDIDGNY----WSTRGCKTLVNSKNEVTCECNHLTNFAILFNVYQVDEDVLNSQEVLNYVSLIGCILSTGCLAATLFAFSCARHKHTRRKTAQLIIINFCIALTLLLIAFMLTTKITITSGV-LCHTMSGVLHFLLLATFSWTATQASFLYKKTVRATRNFKGEDRRTFYISFCL-AWGLPIVVSGVTSNFTSAQF--VEPVTHSCIMKGDIFIYSTIIPIACII-LFNLIVFIMVMRKVHGHFKTRASFQQNEDKQMWKRAKATMACMVLLGLTWSFGFMAVGDLRAPLQWLFCITNTLQGVFVFVFYVLLNDEVRKAW 998
            G C  ++        Y +   +  E     CI  +   A          R C  SI +  ++W+      C        K   L NI ++D + + V E    I NL + +  +  E+     TK++  KI DI     E+  N+  ++  II +      N +   +E  N++L  +++    ++     +SGQ        LA+++   + +    A +I S+E+    +I   N P    +     ASIYLP+S  E    ++LQ I        FF  T   +       + ++++SASI   + ++ L  PV +T +  G   +  +  C FWD + N     W++ GCK    + N   C+C+HLT+F +L ++ +   D +N Q +L  ++  GC +S+  L   +  +  A HK  R+     I+IN C AL +L + F++ + ++    V +C T +  LH+ LL +F+W   +A  +Y   V+    +       + + FCL  WG+P ++  +T +     +  + P T  C +K D   Y +++   C+I L NL +F  V+ +++     ++  Q+   K +    K TM+   LLGLTW F F A G +R    +LF I NTLQG F+FVF+ ++ + VR+ W
Sbjct: 2384 GNCKADETASKYKGTYKWLLTNPTETAQTRCIKNEDGNAT---------RFCSISINTGKSQWEKPKFKQCKLLQELPDKIVDLANITISDENAEDVAE---HILNLINESPALGKEE-----TKIIVSKISDISQCD-EISMNLTHVMLQIINVVLEKQNNSASDLHEISNEILRIIERTGHKME-----FSGQIANLTVAGLALAVLRGDHTFDGMAFSIHSYEEGTDPEIFLGNVPVGGIL-----ASIYLPKSLTERIPLSNLQTI-----LFNFFGQTSLFKTKNVTKALTTYVVSASISDDMFIQNLADPVVITLQHIGGNQNYGQVHCAFWDFENNNGLGGWNSSGCKVKETNVNYTICQCDHLTHFGVLMDLSRSTVDSVNEQ-ILALITYTGCGISSIFLGVAVVTY-IAFHK-LRKDYPAKILINLCTALLMLNLVFLINSWLSSFQKVGVCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFNIYIPN----YILKFCLVGWGIPAIMVAITVSVKKDLYGTLSPTTPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQLNS---VKSQIQKTRRKMILHDLKGTMSLTFLLGLTWGFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCVMKESVREQW 2997

The following BLAST results are available for this feature:

BLAST of TCONS_00008851-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008851-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AGRG4	3.581e-50	26.33	Adhesion G-protein coupled receptor G4 OS=Homo sap...	[more]

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TCONS_00008851-protein (polypeptide) - C. hemisphaerica