TCONS_00008317-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008317-protein
Unique NameTCONS_00008317-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length368

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008317-protein ID=TCONS_00008317-protein|Name=TCONS_00008317-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MDLNFAGGGEQPQKPLYTTQAHVFQIDPDTKKSWLPSCKQAVGVSYYYDS
SKFIYKIISVENAKILINSTITSAMTFTKTSQKFGQWSDAKNNTVYGLGF
GSESDLKKFADKFKEVKNNVRCGTPPSVPKNPANLKNNHIIDPSPATSMK
SMSSNSTSSYDEETQSPGSHRSSSSSSESQIKYENDRLKKALAQSSSNAK
KWETEFQTLKNNNARLTAALQESAVNVEKWKEQLNNYKEDNQRLRKKLAA
SAGSGGAKSNSTEVSDLEKRVSELENKLKRKEEELSRITQHSTDELHVLR
EKNAQLSKKLKTHEDKLSDDVNNNRKQNEEIRNYEGKLKQFSETSHEMES
KLRELFTLQQKMNGLMKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004671XLOC_004671Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008317TCONS_00008317Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000697WH1/EVH1_dom
IPR011993PH_dom-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 257..291
NoneNo IPR availableCOILSCoilCoilcoord: 185..247
NoneNo IPR availableCOILSCoilCoilcoord: 324..351
NoneNo IPR availableCOILSCoilCoilcoord: 296..316
NoneNo IPR availableGENE3D1.20.5.50coord: 156..254
e-value: 0.005
score: 16.0
NoneNo IPR availableGENE3D1.20.5.340coord: 302..367
e-value: 0.16
score: 11.3
NoneNo IPR availableGENE3D1.20.5.730coord: 255..301
e-value: 0.0011
score: 18.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..334
NoneNo IPR availableCDDcd01206EVH1_Homer_Veslcoord: 13..117
e-value: 1.05229E-60
score: 192.178
IPR000697WH1/EVH1 domainSMARTSM00461WH1_2coord: 11..117
e-value: 1.5E-26
score: 104.2
IPR000697WH1/EVH1 domainPFAMPF00568WH1coord: 14..116
e-value: 2.9E-28
score: 97.9
IPR000697WH1/EVH1 domainPROSITEPS50229WH1coord: 8..120
score: 18.854
IPR011993PH domain-likeGENE3D2.30.29.30coord: 12..127
e-value: 4.4E-26
score: 90.8
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 9..132

Blast
[Close]
BLAST of TCONS_00008317-protein vs. Swiss-Prot (Human)
Match: HOME2 (Homer protein homolog 2 OS=Homo sapiens GN=HOMER2 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 8.174e-80
Identity = 135/285 (47.37%), Postives = 187/285 (65.61%), Query Frame = 0 
Query:    9 GEQPQKPLYTTQAHVFQIDPDTKKSWLPSCKQAVGVSYYYDSSKFIYKIISVENAKILINSTITSAMTFTKTSQKFGQWSDAKNNTVYGLGFGSESDLKKFADKFKEVKNNVRCGTPPSVPKNPANLKNNHIIDPSPATSMKSMSSNSTSSYDEETQSPGSHRSSSSSSESQIKYENDRLKKALAQSSSNAKKWETEFQTLKNNNARLTAALQESAVNVEKWKEQLNNYKEDNQRLRKKLAASAGSGGAKSNSTEV-SDLEKRVSELENKLKRKEEELSRITQHS 292
            GEQP   ++TT+AHVFQIDP+TKK+W+P+ KQAV VSY+YD ++  Y+IISV+ AK++INSTIT  MTFTKTSQKFGQW+D++ NTV+GLGF SE  L KFA+KF+EVK   +     +  K      +NH    S  +  ++ SS   SS +       SH   +  + + +K END+LK AL QS++N KKWE E QTL+ +NARLT ALQESA +VE+WK Q +  +++N RLR K+          +   E  + L++R+ ELE +L+ KE EL  + + S
Sbjct:    2 GEQP---IFTTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISVDGAKVIINSTITPNMTFTKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVKEAAKIAKDKTQEK--IETSSNH----SQESGRETPSSTQASSVNGTDDEKASH---AGPANTHLKSENDKLKIALTQSAANVKKWEIELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRNKIDELEEQCSEINREKEKNTQLKRRIEELEAELREKETELKDLRKQS 274
The following BLAST results are available for this feature:
BLAST of TCONS_00008317-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HOME28.174e-8047.37Homer protein homolog 2 OS=Homo sapiens GN=HOMER2 ... [more]
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