TCONS_00007387-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00007387-protein
Unique Name	TCONS_00007387-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	746

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00007387-protein ID=TCONS_00007387-protein|Name=TCONS_00007387-protein|organism=Clytia hemisphaerica|type=polypeptide|length=746bp
MASKSILILSISILVMVNVHQCKANLNSGTENEIVLGMFAKCEKDTVKGP
NIIATELSNLMSRFQFLISRPPFSFVYHNADVCSYQDLLNTLIDLFTTNK
FSTSRHTKVKHIVVYLPEEMLKLLLSLVSHTDIIIWPLQLIQDLVWFQGH
PNYEKLHRKGVRKPAEMISDMMSTYEWRNAHVVELFEMNKNPEVDVDKLI
TTLPSSTCLSYTSFEIGGSSVPDKLLKVLEQLKAEKEASVIFVVGTVGGE
FKKLAVENGVSGKYWVIFSKYADLESKDEYISIKNSGDIMYSGSLVFHND
RCAPGKKMADCLEENTEMRDTVYRLKRNNIVHVRYISINTWKETRNYHQM
EYLQLYNGSHNKFLLSLDQVKYTETFLETRVKSKCRKCLYCQDLCPDDTA
VLNIEPGYYDKKFGLTCQKCPLTNRITEYGQCSLCEDGLKLNKNRTVCYD
PVHQFEIHPSCYVISILGIGISLFILIIYWIYRETPVVKSSNFELSIIQL
IFCILLHSSFFVFVVHKPTQMICTVRPVVFSTLLVAVVSIVVCKAEKILI
IFYTRRRMTPKDIKDITMRQLVIFSFLISINFILVPAVFTLPASVESSPL
ENQDGYVQEFCSSDYEFYIQTIYAIVILLLSIVQGYRGRKLPANYNEGNS
ICLASATTLSALAFCIWILRSNQKSLDVYNRITMTWVSLSTALIFIVLCL
HGVKVFVILFQGHKNTKTYQLHAMLADTMRDIEKVTLNPRKXRHAC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004155	XLOC_004155	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00007387	TCONS_00007387	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017978	GPCR_3_C
IPR017900	4Fe4S_Fe_S_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 470..705 e-value: 3.5E-27 score: 95.6
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 463..724 score: 19.526
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 385..396

Blast

[Close]

BLAST of TCONS_00007387-protein vs. Swiss-Prot (Human)
Match: GRM8 (Metabotropic glutamate receptor 8 OS=Homo sapiens GN=GRM8 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.152e-17
Identity = 84/316 (26.58%), Postives = 143/316 (45.25%), Query Frame = 0

Query:  417 CQKCPLTNRITEYGQCSLCEDGLKLNKNRTVCY-DPVHQFEIHPSCYVI----SILGIGISLFILIIYWIYRETPVVKSSNFELSIIQLIFCILLHSSFFVFVVHKPTQMICTVRPVVFSTLLVAVVSIVVCKAEKILIIFYTRRR--MTPKDIKDITMRQLVIFSFLISINFILVPAVFTL-PASV-----ESSPLENQDGYVQEFCS-SDYEFYIQTIYAIVILLLSIVQGYRGRKLPANYNEGNSICLASATT-LSALAFCIWILRSNQKSLDVYNRITMTWVSLSTALIFIVLCLHGVKVFVILFQGHKNTK 717
            C++C   N   +   C LC    + N NRT C   P+ + E H    V+    +ILGI  + F+++ +  Y +TP+V++S  ELS + L    L +S  F+ +   P  +IC+ R V     +    + ++ K  +I  IF   ++    PK I   +  QLVI   LIS+  + V   F + P  +     E   L+ +       C  SD        Y+I++++   V   + R +P  +NE   I     TT +  LAF      + Q +  +Y + T   VS+S +    +  L+  KV++I+F   +N +
Sbjct:  538 CERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHSPWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIA-APDTIICSFRRVFLGLGMCFSYAALLTKTNRIHRIFEQGKKSVTAPKFISPAS--QLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRTLDPEKARGVLKCDISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYIQTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQ 850

The following BLAST results are available for this feature:

BLAST of TCONS_00007387-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00007387-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRM8	6.152e-17	26.58	Metabotropic glutamate receptor 8 OS=Homo sapiens ...	[more]

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TCONS_00007387-protein (polypeptide) - C. hemisphaerica