TCONS_00006873-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006873-protein
Unique Name	TCONS_00006873-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	365

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006873-protein ID=TCONS_00006873-protein|Name=TCONS_00006873-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
RSFYAENWDDWAGYQSNEQQEQQQEGKNEELSEQSEEDGRGDEMEEYMED
AEGGYEGHCEDDDFNMDADYVDTRSAKKKMKEKRALLSGKNKKQSKFLEA
IQKKKPVFDPKDKTFEEYFDEYYKLDFEDIVGDMPVRFQYRQVMANNYGL
STNEILDAENRELNEWCSLKRVIRYNTEAEEQSERQKYKKKSRNKQKKEI
VFSSLTKKAQENENEAPVGDIGSGQGSSKQDGRKANTHSKNKHTSKSNQN
LDKTKSPGKQKQKQIKNNNVPQNKRGFNANKTQKQNKPERNKTALNQLNT
QSKRGFKKRLQPKLGGSNHSLTISSTKQRKIMKQFKGANKDVMNKLSSGR
LAAYGLDKRKKGKED

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003855	XLOC_003855	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006873	TCONS_00006873	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024626	Kri1-like_C

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..329
IPR024626	Kri1-like, C-terminal	PFAM	PF12936	Kri1_C	coord: 113..199 e-value: 7.0E-29 score: 99.8

Blast

[Close]

BLAST of TCONS_00006873-protein vs. Swiss-Prot (Human)
Match: KRI1 (Protein KRI1 homolog OS=Homo sapiens GN=KRI1 PE=1 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 3.027e-49
Identity = 83/161 (51.55%), Postives = 115/161 (71.43%), Query Frame = 0

Query:   56 EGHCEDDDFNMDADYVDTRSAKKKMKEKRALLSGKNKKQSKFLEAIQKKKPVFDPKDKTFEEYFDEYYKLDFEDIVGDMPVRFQYRQVMANNYGLSTNEILDAENRELNEWCSLKRVIRYNTEAEEQSERQKYKKKSRNKQKKEIVFSSLTKKAQENENEA 216
            E HCED +FNMDADY  ++  KKK   + A L+GK K++S F  A+ ++KPVF+P DKTFEEY DEYY+LD+EDI+ D+P RF+YR V+  ++GLST EIL A+++ELN WCSLK+   Y +E EE  +++ Y +K++N  KK  VF SL ++  E   EA
Sbjct:  444 ELHCEDPNFNMDADYDPSQPRKKK---REAPLTGKKKRKSPFAAAVGQEKPVFEPGDKTFEEYLDEYYRLDYEDIIDDLPCRFKYRTVVPCDFGLSTEEILAADDKELNRWCSLKKTCMYRSEQEELRDKRAYSQKAQNSWKKRQVFKSLCREEAETPAEA 601

The following BLAST results are available for this feature:

BLAST of TCONS_00006873-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006873-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KRI1	3.027e-49	51.55	Protein KRI1 homolog OS=Homo sapiens GN=KRI1 PE=1 ...	[more]

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TCONS_00006873-protein (polypeptide) - C. hemisphaerica