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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026373 ID=TCONS_00026373|Name=TCONS_00026373|organism=Clytia hemisphaerica|type=transcript|length=856bp
agtactttaaaaaatcaataaaaataaatgagaTATTAGGCAATGAGCGA
AACACCACCGTCCACAAATGAAAGTATTTTGAATGAAGATGTTTCGAGTG
ACAGCACAGAACCAAAGccaatgagaTGCATCGATTTTATTTGGAGATGG
AGAAAATGCACATCTGCTGGCAATCATTTTCGCCACTATTACATTTACGG
TGAATTTCCATTATGTGAATTTGAGAAGGAGTGtatcaaaagatgttttt
cgcACAAGTTCAAGGACCACGATGAAGATAAGCAATATTTATTGAAAGCT
GAACAACAGATCAAagacaaagaagaaaatttcaccGATAAACCCTCTCG
TCATGTGTGGGAATTTCGTGAAAATCCGGCCGCTGATTGGGGGAAAAAGA
ACAATACTGAAAATGCTGCGGTTTGATTGGTTGATATGATGGAGATAAAC
TTTTAATGGCTCAGCTCGTTGGTGGCTTGAATACACAAAACATTGCTCCA
GGTACCTAGAacttgttttcttttatttacaaGGGAAGAAAGTggtatta
tttttctaaaaaaaatatatttctacAATTATTAATCACACAAAAAAAGa
tctaaaaatgacaaaagaaaatctcACAGTGTACGTCACTCACAAGTCTA
AAGATTTTTTTCCGTAATAAATATTCCTATCAATACGGCTAGAATCAAAT
CATATCAAATTACGGTGCACCGGTGATTTGTCTAGGAGAATTCCTAGTAG
AAGTTCTGGCAGTGTTCATGCCACTCCTTTCGCGCATACGTTCTAGCTCT
TCTTGTAAATATTGTTTTTCGATTTGTTCTGCTCGTAATGTAGATTCGGT
GTCTTT Run BLAST on NCBI transcript from alignment at sc0000570:50925..53550+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026373 ID=TCONS_00026373|Name=TCONS_00026373|organism=Clytia hemisphaerica|type=transcript|length=2626bp|location=Sequence derived from alignment at sc0000570:50925..53550+ (Clytia hemisphaerica)
agtactttaaaaaatcaataaaaataaatgagaTATTAGGCAATGAGCGA
AACACCACCGTCCACAAATGAAAGTATTTTGAATGAAGATGTTTCGAGTG
ACAGCACAGAACCAAAGGTATATTGCCGGGGCTACTACACTTTTGACCCG
ATTtcgtgaattttacgacccttattggaccaaatttcgatgtttttgGA
GTCAAAAGATTCTCCTATTTTTCAAACCTTTATTTGGACTTCCAGGTTCC
GAAAAGGCACCCTAAAGGGCGGtacatacccgtacccttcacttgcctaa
gtaccccaccCTGAGTTAATTTATTCTTTGCATTGTAAGAACAGCCTCTA
TTTTGATTGTGGTTTTCTGGAATTTTACGTGATTCTTGACTAAAGCAATC
TATGTTATGATATCTAAACCCCGTGCGTTCAATTTAAACCTGACCTTAAG
ACCATGTTCGAGCGCAACAGCTCTGTTTCGCTCTGAAACGAAATGAAACC
ATGCTATTGGTTAGAAAGTGacagaaaaattcaatttaacCAAGAACTgg
ttcatttcgtttcggagcgaaatggaaccgtcacgtgcgaacgTGGTCGA
AATGGTAAATGACATTCTGGCATCTGACCACGGAATGGGCTCCTTGTAGC
CCTCTGTTCGTGCCACGGCAAACATTTCTACAGACTAAACGTTGACAAGG
CCTCGCATAAAAATACAATCTTTTACCACCTTCTTATCACGAGTTATGAA
CGATACTTGACCTCTCTAAAGCTAAGGTTTAGACAAGAATAATGATTAAG
CTTTAAAATGACCgtcagatttttgtaaaaagtctttactttttttctct
tttttttcagccaatgagaTGCATCGATTTTATTTGGAGATGGAGAAAAT
GCACATGTAAGCAATTATTTTGTAAAGCCCTTTTTTCAAGTGAGGAATTA
TCGACGGGGGAATGGACATAAACATGTGAGAGACTTTCATGACGTTTTAA
TCAATTTCTAAATATTTAAAACGCCATGGAAGCTTCCCAATCAAGACTGT
TGtattatttgaataaagattGCTAACTGCTTTAACCTTGGGCTTAGTAG
ACTAGTAGAGTAGATAGGCTGGTTGGTGGACGGGGTTAGTTGGCGGACGC
ACGACTTTAAACCcagaggaaaataaaagaagCACATCTAAGTTTTTATA
GTTTTTGAGAAAGTGAAATTATCCGCCAACCGGCTTAATAGCTAGGTTAt
gcacgggtttattttgaccgtaaagtgcgataccataggcctgtacataa
cttgccaagcaaaccatgcaagtgaaatcttaagtacaggcctacgatat
cgcattttagtaataaaattccgcgacagtgtttttcatttcaatgtttA
TTGTAGTTAGTACAGTAGTCTAtacagacccgatatctacggctaatttc
aaaattcattgtcgtAGAGGTACTACGCTatgataatcgtgagatacact
ctggtacagagtaataGTACAGTAGTCCGCCCCTGAGATCGATTTGAGGT
CTAATATTTTGTTTGACGATTCCTTTACAGCTGCTGGCAATCATTTTCGC
CACTATTACATTTACGGTGAATTTCCATTATGTGAATTTGAGAAGGAGTG
tatcaaaagatgtttttcgcACAAGTTCAAGGACCACGATGAAGATAAGG
TGGGTTGTGAATGATGCATTAGCAAATTTTGCCTGTATAGGTCTGGGGCC
ACTTGaaacaaatttcatcaaaataaaacataaaaaagttgcattttgat
tgataaactttcCGTCATTTTAGGTTGGGCAACCACAGTAACTTTCTCAT
CAAATTGTAACACTTTTCGTGTTacagttttcaaatgttttattttgatt
ttttcaagtgGCCCCCAGACCTTAACCTTTCAACCTCTTAACCTCTTAAC
TTATAACCTTTTAACCTTTTATGATCAATATGATTGCTTGTTGACCAAAT
TTTCTACAGTCGTAAAAATCAAGACGTGAATTCTCTTCCCTTGAACTTTC
AGCAATATTTATTGAAAGCTGAACAACAGATCAAagacaaagaagaaaat
ttcaccGATAAACCCTCTCGTCATGTGTGGGAATTTCGTGAAAATCCGGC
CGCTGATTGGGGGAAAAAGAACAATACTGAAAATGCTGCGGTTTGATTGG
TTGATATGATGGAGATAAACTTTTAATGGCTCAGCTCGTTGGTGGCTTGA
ATACACAAAACATTGCTCCAGGTACCTAGAacttgttttcttttatttac
aaGGGAAGAAAGTggtattatttttctaaaaaaaatatatttctacAATT
ATTAATCACACAAAAAAAGatctaaaaatgacaaaagaaaatctcACAGT
GTACGTCACTCACAAGTCTAAAGATTTTTTTCCGTAATAAATATTCCTAT
CAATACGGCTAGAATCAAATCATATCAAATTACGGTGCACCGGTGATTTG
TCTAGGAGAATTCCTAGTAGAAGTTCTGGCAGTGTTCATGCCACTCCTTT
CGCGCATACGTTCTAGCTCTTCTTGTAAATATTGTTTTTCGATTTGTTCT
GCTCGTAATGTAGATTCGGTGTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026373-exon-sc0000570-1491911889:50925..51041 | TCONS_00026373-exon-sc0000570-1491911889:50925..51041 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1510915933:50925..51041 | TCONS_00026373-exon-sc0000570-1510915933:50925..51041 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1575043694:50925..51041 | TCONS_00026373-exon-sc0000570-1575043694:50925..51041 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1491911889:51785..51830 | TCONS_00026373-exon-sc0000570-1491911889:51785..51830 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1510915933:51785..51830 | TCONS_00026373-exon-sc0000570-1510915933:51785..51830 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1575043694:51785..51830 | TCONS_00026373-exon-sc0000570-1575043694:51785..51830 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1491911889:52505..52623 | TCONS_00026373-exon-sc0000570-1491911889:52505..52623 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1510915933:52505..52623 | TCONS_00026373-exon-sc0000570-1510915933:52505..52623 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1575043694:52505..52623 | TCONS_00026373-exon-sc0000570-1575043694:52505..52623 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1491911889:52977..53550 | TCONS_00026373-exon-sc0000570-1491911889:52977..53550 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1510915933:52977..53550 | TCONS_00026373-exon-sc0000570-1510915933:52977..53550 | Clytia hemisphaerica | exon |
| TCONS_00026373-exon-sc0000570-1575043694:52977..53550 | TCONS_00026373-exon-sc0000570-1575043694:52977..53550 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000570 | supercontig | sc0000570:50925..53550 + |
Blast
The following BLAST results are available for this feature:
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