TCONS_00005277-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005277-protein
Unique NameTCONS_00005277-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length612

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005277-protein ID=TCONS_00005277-protein|Name=TCONS_00005277-protein|organism=Clytia hemisphaerica|type=polypeptide|length=612bp
MSIYNPSQQQQQPYGQPPPGQQQAPYPGSGGGGQAPYPGQQAVPGQQMGY
QQPGPGQPPPQQTQMQMNYRPHVQPVGPPLSKIEITIACKNLLDLDVFSK
SDPFVIVSMMQGQWVKIGQTEVMKNELNPTFVKSFTVDYYFEEQQMIKFE
VYDEDSSSNNVKNHDFLGCFVTSLGSIVGEHGGKVEHPLQTPSTKDKERN
TNYKKKSAGTIIIRSEEVGNSTDELLISLCGKNLDKKDFFGKSDPYLVFE
KCNEDNSFTKVHKTEIITQNLNPAWKPFRIAVRTLCNGDLQRTIRVSCFD
WDNDGSSDFIGSFETSAKELIDYKANNRYTYELINAKKKAKSKKYKNSGT
IHLEQCTVEKKPSFVELMSKGIELNFIVAIDFTASNGEPNRPDSLHYNTQ
NQPSQYVQALDAIGGVLEDYDTDKLFPAYGFGAKIPPSQTVLHDFALNFN
PQNPFCQGVQNIIGAYYHSIRSVQLYGPTNFSPVINNTIRIAQQNPQGKQ
YFVLMILTDGIITDMNQTKEAIVNAANLPISIIIVGVGNADFSAMDQLDG
DDVRVSSNGRSAARDIVQFVPFRDYLTQNRYDPANGVRLAQNVLHELPSQ
LVEYYIKHPPNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003010XLOC_003010Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005277TCONS_00005277Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR002035VWF_A
IPR010734Copine
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 82..186
e-value: 3.9E-11
score: 53.0
coord: 223..329
e-value: 7.1E-6
score: 35.5
IPR000008C2 domainGENE3D2.60.40.150coord: 59..206
e-value: 1.3E-22
score: 79.5
IPR000008C2 domainGENE3D2.60.40.150coord: 226..360
e-value: 3.2E-19
score: 68.8
IPR000008C2 domainPFAMPF00168C2coord: 229..324
e-value: 4.8E-11
score: 42.7
coord: 87..181
e-value: 1.0E-16
score: 61.0
IPR000008C2 domainPROSITEPS50004C2coord: 82..171
score: 12.129
IPR000008C2 domainPROSITEPS50004C2coord: 231..314
score: 9.509
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 229..341
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 77..195
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 373..571
e-value: 9.8E-13
score: 58.3
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 367..570
e-value: 8.4E-11
score: 41.6
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 375..597
score: 9.02
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 372..569
IPR010734CopinePFAMPF07002Copinecoord: 394..605
e-value: 3.5E-80
score: 268.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableCDDcd04047C2B_Copinecoord: 223..334
e-value: 3.72697E-48
score: 163.505
NoneNo IPR availableCDDcd04048C2A_Copinecoord: 81..197
e-value: 1.20687E-51
score: 173.524

Blast
[Close]
BLAST of TCONS_00005277-protein vs. Swiss-Prot (Human)
Match: CPNE9 (Copine-9 OS=Homo sapiens GN=CPNE9 PE=1 SV=3)

HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0
Identity = 282/530 (53.21%), Postives = 374/530 (70.57%), Query Frame = 0 
Query:   79 PLSKIEITIACKNLLDLDVFSKSDPFVIV---SMMQGQWVKIGQTEVMKNELNPTFVKSFTVDYYFEEQQMIKFEVYDEDSSSNNVKNHDFLGCFVTSLGSIVGEHGGKVEHPLQTPSTKDKERNTNYKKKSAGTIIIRSEEVGNSTDELLISLCGKNLDKKDFFGKSDPYLVFEKCNEDNSFTKVHKTEIITQNLNPAWKPFRIAVRTLCNGDLQRTIRVSCFDWDNDGSSDFIGSFETSAKELIDYKANNRYT-YELINAKKKAKSKKYKNSGTIHLEQCTVEKKPSFVELMSKGIELNFIVAIDFTASNGEPNRPDSLHYNTQNQPSQYVQALDAIGGVLEDYDTDKLFPAYGFGAKIPPSQTVLHDFALNFNPQNPFCQGVQNIIGAYYHSIRSVQLYGPTNFSPVINNTIRIAQQNPQGKQYFVLMILTDGIITDMNQTKEAIVNAANLPISIIIVGVGNADFSAMDQLDGDDVRVSSNGRSAARDIVQFVPFRDYLTQNRYDPANGVRLAQNVLHELPSQLVEY 604
            P +KIEIT++C+NLLDLD FSKSDP V++   S    +W + G+TEV+ N LNP FV+ F +DY+FEE+Q ++F+VY+ DS +N  K  DFLG    +LG ++G  G +VE  L           T    K  GTI++ +EE+ N  D   + LC   LDKKDFFGKSDP+LVF + NED +FT  HKTE++   LNP W+PF I VR LCNGD  RT+++  +DWD DGS DFIG F TS +EL   KA N++T YE++N +KK K KKY NSGT+ L   +V+ + +FV+ +  G +LNF VAIDFTASNG P +P SLHY +  Q S Y  AL A+G +++DYD+DKLFPAYGFGAK+PP   + H F LN N ++P C G++ ++ +Y+ S+R+VQLYGPT F+PVIN   R A +   G QY+VL+I+TDG+I+DM QTKEAIV+A++LP+SIIIVGVG A F AM++LDGDDVRVSS GR A RDIVQFVPFRDY+ ++     +  RLA++VL E+P QL+ Y
Sbjct:   12 PATKIEITVSCRNLLDLDTFSKSDPMVVLYTQSRASQEWREFGRTEVIDNTLNPDFVRKFVLDYFFEEKQNLRFDVYNVDSKTNISKPKDFLGQAFLALGEVIGGQGSRVERTL-----------TGVPGKKCGTILLTAEELSNCRDIATMQLCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVVKNTLNPVWQPFSIPVRALCNGDYDRTVKIDVYDWDRDGSHDFIGEFTTSYREL--SKAQNQFTVYEVLNPRKKCKKKKYVNSGTVTLLSFSVDSEFTFVDYIKGGTQLNFTVAIDFTASNGNPLQPTSLHYMSPYQLSAYAMALKAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNNNDEDPNCAGIEGVLESYFQSLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITDGVISDMTQTKEAIVSASSLPMSIIIVGVGPAMFEAMEELDGDDVRVSSRGRYAERDIVQFVPFRDYVDRSGNQVLSMARLAKDVLAEIPEQLLSY 528
The following BLAST results are available for this feature:
BLAST of TCONS_00005277-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CPNE90.000e+053.21Copine-9 OS=Homo sapiens GN=CPNE9 PE=1 SV=3[more]
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