TCONS_00026348 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026348
Unique NameTCONS_00026348
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2484

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026348 ID=TCONS_00026348|Name=TCONS_00026348|organism=Clytia hemisphaerica|type=transcript|length=2484bp
TACAATGACTTGAAAATCCATCAAACAACAACTCCAAGGGAAAAGCCATC
TGCAGATTCCAAACTGGTTTTTGGTAAACAAATGGCTGATCACATGCTTG
TTGCAGAATGGACCATTGACAATGGATGGGATATTCCAAGTATTGTTCCA
TATGGCCCGTTAGCAATTCCACCTTCTGCTTCTGTCCTACATTATGGCAT
TGAGGTATTTGAGGGTATGAAAGCATATAAATGTACCGATGGATCAATAC
AACTTTTTCGACCAGAAGAAAATATGAAACGACTATTTGCTTCAGCTGAA
AGGCTAAGTTTACCTacatttgacAAAGAAGAAGTTTTGAAGTGCATTGC
AGAACTGGTGCGTGTTGATCAAGACTGGATCCCAGATTGTGACAGCAGTT
CATTATATATTCGACCAACGATTATAAGTACAGAGCCTTCTCTTGGTGTT
AAACCACCAGATAGTGCAATGTTGTTCGTCATCACAGGTCCAGTTGGGTC
TTATTACGACACAGGAAGTTTCCAACCCATCTCACTTTTAGCAGACCCAA
GTTTCGTCAGAGCATGGCCTGGTGGTATTGGAGATTGCAAAGCTGGAGGA
AACTACGGCCCAACGATATACGCGCAAAAATTGGCTCAAGCAAGGGGCTG
CTCTCAATGCTTATGGCTATACAAAGACCAAGTCACTGAAGTTGGAACCA
TGAATTTCTTCATGTTCTGGGTCAACGAACAAGGAGAACAAGAGCTGGTC
ACGCCACCCCTTAATGGCCTGATTTTACCAGGAATCACGCGAAAATCACT
CCTCGACCTAGCACGAGAATGGGATGAATTCAAAGTCTCCGAAAGGGATT
TTACTTTACAAGAGGTCGCCAAGGCTGCGTCAGAAGGACGAGTGAAAGAA
ATTTTCGGTGCTGGCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCA
TtatcttgatgacgtcatcgaaattGAAAATAACGGATTCCCAATCGCGC
AACGTTTCTTTGACGAGTTGACGAGCATACAGTACGGACGAACACCTCAT
CCATGGAATTATCTGGTTGACTCGCAACAACTTCGACAAAAACAACCTAA
CCTTCAgtaacaacaacaaccactTCTAAATACCTTTCCAaccgaaaaca
aaaaaaatacccTTTTTAccttttatcaaaacttttattcCCAAAACAAA
GCTTTCTGTATTACCAAACCTTTTTAcaaacttgaaatattttattttta
acctCTGTAtattattcttaatatttgaaaaacaaaatcttgtaaggata
aaaatgatatttaataaaatcttttaaatttttttttttaaagacaaaaA
CTCATTTTGGATAGAGTTTTACAAGAAATTTGGACTGGTTGCatttctga
aacaaaaaatcataaattcagATCTCTTGGTATTTGATACTAACACGTGA
CgtattttgactgatttttgaatacattttaaataaaagggCGTCCACTG
TTTTCCCATAGTGTAGACGATAAAAAAAGTAacatatttattatttaatC
ACCATCATCATGTATGCATTTTTGtgctattttattttatttataaaatt
attttaaaaagaaagaaaagaataataaaaatctaattaaatGTGTATGC
TGTATCAATtagtgaatttgaaaaattgattgcGGCTAAAAAAGCTTTGA
GCAAAATTAatggacataacagtacttgcgaaatttgtaaacaaactgta
tgcagcggatacgaaatcaaaacaaatgtcacatgtcaaaataaaaaatc
aaaccaaatatggctaattttgattgttcaattgttttacaagtttgttt
tggacacgtgattttaattgttctctttaatgacacgtggttcgcgcaat
gtttacattttactactttaatgtccctttaaatagtaattgtatacttt
tttttataaggacgaTTAAGGTTAAAAAAAAGATGAGTTTTCGACCAAAG
CTGAGTCTGGAATTTATGAGTTTCAACGAATTCAAGGGTAAAACAAGTAA
TTAAGGAAGGAATTTAGCTTCGGGATGAGAACAATCTAAGGCTCAAagct
tcaaaaaatgaaaaatccaaGCCTCGCTGTTCATTTGTATTATTGAGTAC
ATCAGTCAGCGACTGTTCAGTCAAATAATATCTTGGTTCCTTTGAAGCTG
GCTGATCTGATTGATTATCATATACACCCTGTCATTAAATGTACATAAAA
ATTCtgcatcatcatcatcatcatcatccatTCCCAAGCTTTTGCATAAG
TTAAATATCATAACAATTTATCACCAGCCTAGTTCATATCTATTCAGTCT
TCTATGTTCATCAAGCCAATCTTCCAAAGGTTTAAAGTAAGCAATGATTG
GCTTAGAACTCAACGTCTTTGAACCGGTCAGTACTTTTAAAACGTCTGGC
CAAGGAAGACTTTTACCCAATGATAACATTTCCc
Run BLAST on NCBI

transcript from alignment at sc0000569:175690..183172-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026348 ID=TCONS_00026348|Name=TCONS_00026348|organism=Clytia hemisphaerica|type=transcript|length=7483bp|location=Sequence derived from alignment at sc0000569:175690..183172- (Clytia hemisphaerica)
TACAATGACTTGAAAATCCATCAAACAACAACTCCAAGGGAAAAGCCATC
TGCAGATTCCAAACTGGTTTTTGGTAAACAAATGGCTGATCACATGCTTG
TTGCAGAATGGACCATTGACAATGGATGGGATATTCCAAGTATTGTTCCA
TATGGCCCGTTAGCAATTCCACCTTCTGCTTCTGTCCTACATTATGGCAT
TGAGGTTTGAACTTCTTTTTTTTCTAGTCGCAGTCATTTGTTCTTCTGAA
CAAAAACTGAATTCCAAAAAGTCATNTTTTTTTTGATGGTAATTCATTAT
TTCTAAATACCACAAATCACAGCATCAGCTGTAAGCAATTTATCATGATT
AAAGGAGTGTGTGAGGTAGATAATTAGAAATTTCTCTACAAAGTCTTTTA
AAATTTGTATACTTTGTGGTGGGGTGTTAAGCTTTATATTTCCAATGTCA
GATTGTGCTGCTCAACATTCCATTACATTCCAGCTAGGTTGACAATAAAT
TATTTCAAGAAATAAAAAGTACATACTTACATTTTTATGACTTCTTTGTG
TTTAGCAGAAAGAATTAAAAAAAAAATGGTAGTCACAATCTCCATCAGAA
ATTTTCTTCGAGCACAGGTAAAAATTTATTTCAAGTAGTTTTTCAACAAA
AAGGCTGTTTTTGTAACTTTTTGAGTACAAAAGTTTAGCAGAGTTATTGT
TAACCACACTTTTACTTTTTGAAAGACAGTAAAAAATGTCTACAATATAC
AACTGTTAAGAGTAAGTTTTCATAATATTCTTATTTTTCAGAAATTAAAC
AAAGTCAAAGGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCAG
AGTAAGTTTTTATTAACATTCTGTTGTTTTTTTATTTTGTGTAAAATTCC
AATTGTACATAAAACAACTATCTCTAAATGTAACTTAGAAGTTAGTGTAA
TCAATTTCTTTATAACATTATTATCTATATTTTTAAAGTACAATGACTTG
AAAATCCATCAAACAACAACTCCAAGGGAAAAGCCATCTGCAGATTCCAA
ACTGGTTTTTGGTAAACAAATGGCTGATCACATGCTTGTTGCAGAATGGA
CCATTGACAATGGATGGGATATTCCAAGTATTGTTCCATATGGCCCGTTA
GCAATTCCACCTTCTGCTTCTGTCCTACATTATGGCATTGAGGTTTGAAC
TTCTTCTTTTTCTAGTCGCAGTCATTTGTTCTTCTGAACAAAAACTGAAT
TCCAAAAAGTCATGTAGGTTAAATTATAGAATGCCTGTGGGTTGAAGGTT
TATAAAAAACAGTAAGAACAAAAACGTAAGACGGAAATTTTTCCCGAAAA
TTTTAAGTATAGGGGAAAATTTTTCAAATCAAAATCAGGGTGGGTACCCT
GATTTTGATTTGAAAAATTTTCCCCTACATCCAATAAGATGATCTCAATT
CGTTTTCTAAAAGATTTGTATTCAAATAATTGGTAGTTACAATATTATAT
TACATTTCATTTTTAGGTATTTGAGGGTATGAAAGCATATAAATGTACCG
ATGGATCAATACAACTTTTTCGACCAGAAGAAAATATGAAACGACTATTT
GCTTCAGCTGAAAGGCTAAGTTTACCTGTAAGTTTTGCACCAGATAGCAA
ACTTAAATAACGAGTCTTAAAAAGTACAAAAAAAATTTAGGTTTTATTTT
TCCCCTATCTGGGAAAGGTTCAACATCTGCTTCTAAGGCCTTACTGGATT
GATCCTAACCAATTTTTTGAAGGTGGCTTTTTTTTTTAGACATTTGACAA
AGAAGAAGTTTTGAAGTGCATTGCAGAACTGGTGCGTGTTGATCAAGACT
GGATCCCAGATTGTGACAGCAGTTCATTATATATTCGACCAACGATTATA
AGTACAGAGGTATTGTTCCTATCTGTGACTGCTTAAAATTTTTGTCATCA
TTAATTGTTAGTAAGTTGAAATGAAGTCTCAAAATGCCGTAAGAGTCAAA
ATCTTACAGTGAATAACTGCCTTGTAGAAAATGTTTGCTCCTACAAAACA
CTTGGTCACTGTATCTTCTTCTACTTTTTAGCCTTCTCTTGGTGTTAAAC
CACCAGATAGTGCAATGTTGTTCGTCATCACAGGTCCAGTTGGGTCTTAT
TACGACACAGGAAGTTTCCAACCCATCTCACTTTTAGCAGACCCAAGTTT
CGTCAGAGCATGGCCTGGTGGTATTGGAGATTGCAAAGCTGGAGGGTATA
TATTTCTACATGTGTCCATGATTTGATCAATCTATTGGGAGAATCCTTTT
ATTTGTGTGTATTTTGTTGTTAAAATTGTAAGGGAAAATACTGTAGGGAA
AAAGTGAAATTTCTTTGTGGTACCTGTGTTGAAAATTATTTATTCTTGTC
GTCATCCATAATTAAGATTTTATTCTCTTTAGAAACTACGGCCCAACGAT
ATACGCGCAAAAATTGGCTCAAGCAAGGGGCTGCTCTCAATGCTTATGGC
TATACAAAGACCAAGTCACTGAAGTTGGAACCATGAATTTCTTCATGTTC
TGGGTCAACGAACAAGGAGGTAAGTCTTAAAAAATGGTTCGAGATTGAAG
AGTTTCATAGATTTTTACCACAACTTAGTTTCGATTGTCTAACACTCACG
TTTGATAATATATACTATCAAAATGGCATTTCTTTCTTCCAAATTGCATA
ACTTGTGACCTATATTAATCACTGTTATGATTAAATCTCTATGCTGTGGT
TAAGACTTCTATCTTAGTCAGTGAATCTTTTGTAATCGTTTTTAACAGTT
TTAAAAGATATCCCTGTTATTTTTTACCTTCTATAGGTAGAATTGGTATT
ATGTAACGTAGCACCCCTGCAGTTCACTTCTCCTACTTCATCTAGGCTTC
TTATTTCCTCAGTTAGCTGTGCATCAAAATGTGCAAAGGATTTAAGAAAA
ATTCCTTCCTCCCTCAGTTGCTACTTCCTTGTTCAATACAATGCTGAATT
TCCTTGTTTGCCTTCGAGATGATTTCGATAATCTGTTATTTTACTTTCAG
AACAAGAGCTGGTCACGCCACCCCTTAATGGCCTGATTTTACCAGGAATC
ACGCGAAAATCACTCCTCGACCTAGCACGAGAATGGGTAAATAACTGAAA
TTCCTTTCAAACTCCAAGACCTAATTACGATTACTCAGGGTGATCGTTCG
ATAGAAATGTAATGTCATTAGACATCGAATAGCTTCCTTGCGGTATCACT
TACATATTTTTCCTTCTATGAATTTTCTCTTGTCGTGGTTAAAGTGAAGT
TGCATAATGATTGTTTGACTTGCCCACATGGCACATTATCATGATCGATT
TATCTCATGAATTTTGAAACATGACCTCGTGAATTACAAATCCACTTTTA
AACATCCTCTTATTATCTTTCTGTGTTATCTTTTTTTATAAGATCAAGGT
TTCTTCTAATTTCTTGTAACTCACGGTTTTTTAGATGATAAAGCCAAGCT
GACTGATAATCCCCTAAATACACAAATATCCAAAGTTTCCGCCCCTTTTT
GACCTTGTAGAGCAGTCTATTTATCCTGAAACTCATAAGATAAGATTTAT
GTTTTGTGTTTTGCATAAAATGCCTAATATTCTGCTTTGAAAACGATTTG
CTGTCACTAGAAATGGGAAACTCTCAATGAATATACTATGTAATAAGTGC
CTTTTTATGGAAAAACAAAACAAGCATCATAACTGTGAAACAAAAATAAA
CATTTTAAGAACTTCTCAACAACTATCAGAAAAACTTATTTTGATATAAT
GTAACATACAATTTAAAACACACACACCTCCTTTTGACGTCAATGCAACC
TGACACTGCAATAATTTGTTTTTTGTTGATTATTGCTTTTCTCGTAATGC
AGCGTCACATTGTCGCATCGGAAAGATAGAAATTGAACTGTTTGACATAA
AACGATTTTCATCACGCCCCCGTTTTAAAAAAATCCTGAAAAGTCTTTTT
TAAAGCGATTGACATGCAGCTTTATGGAATTTTTAACTGGTGATGTTTTG
TCAGTTTGCATATGATGAGTCATATCAATAGTTTACTGAGAGTTTATACT
GTAGCTTGAAGCCTGAAGACCTTTAGAATGGTAGAATGACAGATTGTTTA
TAATCTTCTTTGGTCCCATATTGATGTTTACGTTTTTACTCTCCTTAGGA
TGAATTCAAAGTCTCCGAAAGGGATTTTACTTTACAAGAGGTCGCCAAGG
CTGCGTCAGAAGGACGAGTATGTATATCTATTTTGTTGACGAATTGCTTT
GGTCAAGTACTCAAAAATAAGCGACCCTTAGGGCCAATTCCTCTACTTTC
CGACTAACAATATAGGTACTTTCTATGTGAGACACTGTGGATTATGAGGA
TCAGGGTCATTTGAAACGACTTTTTCTAAGAGTTAAATTTTATTTATCGT
CGAATTCTGTGTTTCTTTTTGAGCCTATGTTGTCTATTCAACGTTCTATG
TCCCTTTTGCTATAAACCATTTTAGGGTGGTAGGAAGATTTCGTTTATTT
TTGATAGCGCTCGTATATGTAATATCCCATAAGTTTTCCCTATTTGAGAA
ACAAGAGAAATTAGAATTATTTTTTTATCGTTAGAGAAAAGAAAAACCTC
CACGCAAGTCAAAAAGGTTTAAAGTGGAAGATTGAAAAGGTAGATTTTAC
CAGATTTTACAAAATCTCTCTTCTATTTTTAGGTGAAAGAAATTTTCGGT
GCTGGCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATTATCTTGA
TGACGTCATCGAAATTGAAAATAACGGATTCCCAATCGCGCAACGTTTCT
TTGACGAGTTGACGAGCATACAGGTAAGATTGAGTCTTTTTTTTCTTATC
GTTCGAATTTGTTTTTTGAGAGCAGATTGTTTTAGGTTTGTGTTTTTAAG
CCACAAAGGGCGAATCTCTCGCCCTTAAAGCATTGTTTGCTCCACTTAGA
ACACAAAATTGAGCTTATATAAAGCTCTCATTAAAGGTCTAAATACTTAA
AATTGCTAATTTTTTGGTGTCCAGGGTTGTCATAGTTTGAAGACGAAAAG
AGTTATGAACCTTAAAAATTGCAGATACGTCAAAGCTTAATTTAGTTATT
GTTAAGTCCTGTTAAATACGAAGTCAGATATAGCATAAATAGCTGAGGCT
TATCTTATATCAGACTTGCATAAAAATAACGTTATTTTGCACACATGATA
TCTCATTTATAATGCTATCACGTGAAAGATCTTCCCAGTAGTTTAACTAA
GATGATAGTTAGAGACGCTGGGTGAAACTGCTGCAAAAAAGAGGCAAGAA
TATTTTGTGTTATTATTTAGTTAGTCTAGTGTGGTATCGTCAAGTTATAT
ATTGGACGATGAAAAAAAGGATCTGAGGCCGTCTATGTATATGGTGTTGT
TTTTGTATATTTCTTAAAAATCTAGTTGCTTGTATAAGATGTCTTTTTTA
TGGTGTTTTTACAACTGGTGTTTTTTAGTGTGGTATCGTCAAGTCAAAAG
ATTTTAAGTTTTTACTTTTTCCCTTGAAGTTTTGACATTTGGTAAGTGAT
CGATGGTTACCATGTGATCGTAGCGAGAGATACATTTAAAAGTCTAGACT
ATAACTATATAGTTGCTATCAGCTTTATTGTGGGGTGAGAAGGCTGTCCT
TCATTCGTAAAGAAGATATCTTGCTTTGAAATCAACCGAATCAACTGAGC
TTCCATTATGATTAAAAAAAAGTTTTATAGCTTCATCTATTCCTCAGGTA
TTCAGACTCGGGCACAGACAGCAGCCATTTTTCCCTTCAGAGCATTTATT
TATTTTTGAAACCAATCCTATAAAAATCATCAAAAACATGAAATTATAAA
TAAGTATTAAAAACATGATAGTACCGATAGCTTCAACTTAGATTTTATAA
AGAAGGTTGCGGATTTTTCTCTTGGTCAAGGCTCTCCAATAAAATCATGG
TGACTTTGATTTTTCATTTTTCACTTTGCAGTACGGACGAACACCTCATC
CATGGAATTATCTGGTTGACTCGCAACAACTTCGACAAAAACAACCTAAC
CTTCAGTAACAACAACAACCACTTCTAAATACCTTTCCAACCGAAAACAA
AAAAAATACCCTTTTTACCTTTTATCAAAACTTTTATTCCCAAAACAAAG
CTTTCTGTATTACCAAACCTTTTTACAAACTTGAAATATTTTATTTTTAA
CCTCTGTATATTATTCTTAATATTTGAAAAACAAAATCTTGTAAGGATAA
AAATGATATTTAATAAAATCTTTTAAATTTTTTTTTTTAAAGACAAAAAC
TCATTTTGGATAGAGTTTTACAAGAAATTTGGACTGGTTGCATTTCTGAA
ACAAAAAATCATAAATTCAGATCTCTTGGTATTTGATACTAACACGTGAC
GTATTTTGACTGATTTTTGAATACATTTTAAATAAAAGGGCGTCCACTGT
TTTCCCATAGTGTAGACGATAAAAAAAGTAACATATTTATTATTTAATCA
CCATCATCATGTATGCATTTTTGTGCTATTTTATTTTATTTATAAAATTA
TTTTAAAAAGAAAGAAAAGAATAATAAAAATCTAATTAAATGTGTATGCT
GTATCAATTAGTGAATTTGAAAAATTGATTGCGGCTAAAAAAGCTTTGAG
CAAAATTAATGGACATAACAGTACTTGCGAAATTTGTAAACAAACTGTAT
GCAGCGGATACGAAATCAAAACAAATGTCACATGTCAAAATAAAAAATCA
AACCAAATATGGCTAATTTTGATTGTTCAATTGTTTTACAAGTTTGTTTT
GGACACGTGATTTTAATTGTTCTCTTTAATGACACGTGGTTCGCGCAATG
TTTACATTTTACTACTTTAATGTCCCTTTAAATAGTAATTGTATACTTTT
TTTTATAAGGACGATTAAGGTTAAAAAAAAGATGAGTTTTCGACCAAAGC
TGAGTCTGGAATTTATGAGTTTCAACGAATTCAAGGGTAAAACAAGTAAT
TAAGGAAGGAATTTAGCTTCGGGATGAGAACAATCTAAGGCTCAAAGCTT
CAAAAAATGAAAAATCCAAGCCTCGCTGTTCATTTGTATTATTGAGTACA
TCAGTCAGCGACTGTTCAGTCAAATAATATCTTGGTTCCTTTGAAGCTGG
CTGATCTGATTGATTATCATATACACCCTGTCATTAAATGTACATAAAAA
TTCTGCATCATCATCATCATCATCATCCATTCCCAAGCTTTTGCATAAGT
TAAATATCATAACAATTTATCACCAGCCTAGTTCATATCTATTCAGTCTT
CTATGTTCATCAAGCCAATCTTCCAAAGGTTTAAAGTAAGCAATGATTGG
CTTAGAACTCAACGTCTTTGAACCGGTCAGTACTTTTAAAACGTCTGGCC
AAGGAAGACTTTTACCCAATGATAACATTTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014796XLOC_014796Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026348-exon-sc0000569-1575043694:182969..183172TCONS_00026348-exon-sc0000569-1575043694:182969..183172Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1575043694:181546..181656TCONS_00026348-exon-sc0000569-1575043694:181546..181656Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1575043694:181264..181383TCONS_00026348-exon-sc0000569-1575043694:181264..181383Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1575043694:180928..181091TCONS_00026348-exon-sc0000569-1575043694:180928..181091Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1575043694:180604..180740TCONS_00026348-exon-sc0000569-1575043694:180604..180740Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1575043694:180037..180122TCONS_00026348-exon-sc0000569-1575043694:180037..180122Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1575043694:178906..178974TCONS_00026348-exon-sc0000569-1575043694:178906..178974Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1575043694:178300..178440TCONS_00026348-exon-sc0000569-1575043694:178300..178440Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1575043694:175690..177141TCONS_00026348-exon-sc0000569-1575043694:175690..177141Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:182969..183172TCONS_00026348-exon-sc0000569-1510915933:182969..183172Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:181546..181656TCONS_00026348-exon-sc0000569-1510915933:181546..181656Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:181264..181383TCONS_00026348-exon-sc0000569-1510915933:181264..181383Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:180928..181091TCONS_00026348-exon-sc0000569-1510915933:180928..181091Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:180604..180740TCONS_00026348-exon-sc0000569-1510915933:180604..180740Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:180037..180122TCONS_00026348-exon-sc0000569-1510915933:180037..180122Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:178906..178974TCONS_00026348-exon-sc0000569-1510915933:178906..178974Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:178300..178440TCONS_00026348-exon-sc0000569-1510915933:178300..178440Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1510915933:175690..177141TCONS_00026348-exon-sc0000569-1510915933:175690..177141Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:182969..183172TCONS_00026348-exon-sc0000569-1491911889:182969..183172Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:181546..181656TCONS_00026348-exon-sc0000569-1491911889:181546..181656Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:181264..181383TCONS_00026348-exon-sc0000569-1491911889:181264..181383Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:180928..181091TCONS_00026348-exon-sc0000569-1491911889:180928..181091Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:180604..180740TCONS_00026348-exon-sc0000569-1491911889:180604..180740Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:180037..180122TCONS_00026348-exon-sc0000569-1491911889:180037..180122Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:178906..178974TCONS_00026348-exon-sc0000569-1491911889:178906..178974Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:178300..178440TCONS_00026348-exon-sc0000569-1491911889:178300..178440Clytia hemisphaericaexon
TCONS_00026348-exon-sc0000569-1491911889:175690..177141TCONS_00026348-exon-sc0000569-1491911889:175690..177141Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000569supercontigsc0000569:175690..183172 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.98586	0	8.38363e-10	0
Blast
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BLAST of TCONS_00026348 vs. Swiss-Prot (Human)
Match: BCAT1 (Branched-chain-amino-acid aminotransferase, cytosolic OS=Homo sapiens GN=BCAT1 PE=1 SV=3)

HSP 1 Score: 395.586 bits (1015), Expect = 3.251e-129
Identity = 187/358 (52.23%), Postives = 249/358 (69.55%), Query Frame = 1 
Query:    7 DLKIHQTTTPREKPSADSKLVFGKQMADHMLVAEWTIDNGWDIPSIVPYGPLAIPPSASVLHYGIEVFEGMKAYKCTDGSIQLFRPEENMKRLFASAERLSLPTFDKEEVLKCIAELVRVDQDWIPDCDSSSLYIRPTIISTEPSLGVKPPDSAMLFVITGPVGSYYDTGSFQPISLLADPSFVRAWPGGIGDCKAGGNYGPTIYAQKLAQARGCSQCLWLYKD--QVTEVGTMNFFMFWVNEQGEQELVTPPLNGLILPGITRKSLLDLAREWDEFKVSERDFTLQEVAKAASEGRVKEIFGAGTAAVVSPVDKIHYLDDVIEIEN--NGFPIAQRFFDELTSIQYGRTPHPWNYLV 1068
            DL +   T  +EKP  ++ LVFG    DHML  EW+ + GW+ P I P   L++ P +S LHY +E+FEG+KA++  D  I+LF+P  NM R++ SA R +LP FDKEE+L+CI +LV++DQ+W+P   S+SLYIRPT I TEPSLGVK P  A+LFV+  PVG Y+ +G+F P+SL A+P +VRAW GG GDCK GGNYG +++AQ  A   GC Q LWLY +  Q+TEVGTMN F++W+NE GE+EL TPPL+G+ILPG+TR+ +LDLA +W EFKVSER  T+ ++  A    RV+E+FG+GTA VV PV  I Y  + I I    NG  +A R   +LT IQYGR    W  ++
Sbjct:   29 DLIVTPATILKEKPDPNN-LVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLTDIQYGREESDWTIVL 385
The following BLAST results are available for this feature:
BLAST of TCONS_00026348 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BCAT13.251e-12952.23Branched-chain-amino-acid aminotransferase, cytoso... [more]
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