TCONS_00026258 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026258
Unique NameTCONS_00026258
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1893

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026258 ID=TCONS_00026258|Name=TCONS_00026258|organism=Clytia hemisphaerica|type=transcript|length=1893bp
ttgttgttgtttttgtttttattattgttgttgtttttgtacaTGTTGTA
TGGAATTATTTGGTTTAGTATGTTTGGTAGAGTATAGTTCTAAGAGAAta
ctgttttattttgtttaaaggTGCTGGTGAAAGTGGTAAAAGTACGATTG
TAAAGCAGATGAGAATTCTTCATGTGGACGGATTCAATGAACAggagaaa
aaagaaaaaatagagGATATAAAACGAAATATAAAAGAAGGAATACTCAC
TGTAACAGGTGCAATGAAAACTATATTACCGCCAGCTACACTGGAACATC
CAGAAGAACAATGGAGGATAGATTGGCTACATGAAAATGCAGCCCCCGAT
GAAGAATTTGAATATCCTCaagacttTTATGATCATGTtgaaatcctatg
gaaagacaAAGGTGTCCAAGGATGTTTTGAAAGATCAAATGAATATCAAT
TAATAGACTGTGCACAATATTTTCTCGATAGGACTTCTGAAGTTCGGAAA
AAAGACTACAGTCCCAGTAATCAAGACTTATTACGCTGTCGTGTTTTGAC
GCGTGGAATTATTGAAACAAGATTTCAAGTGGATAGAGTAAATTTTCATA
TGTTTGACGTTGGTGGACAAAGAGATGAACGTCGAAAATGGATCCAATGT
TTCAATGaTGTAACAGCTATTATATTTGTTGTTGCGTGTAGTAGTTATAA
TCTTGTATTACGAGAGGATCAAACACAAAACAGATTACGTGAAAGCTTAG
AATTATTTACTGGTATATGGAATAATAGgtttCTAAAAACTATATCCGTG
ATTCTATTTCTAAATAAACAAGATTTACTTCGTGACAAAGTGCTGGCACA
AAAGTCAAAATTAGAAGATTACTTTGCAGATTTTGCAAGATATAGGACAC
CTGAAGACGCCATAAAAGAAGCTGGCGAGGAAGATGAGGTGACCAGGGCA
AAATATTTCATTAGGGACGAATTTTTAAGGATAAGCACGGCAACCGGTGA
AGGGAAGCATTACTGTTATCCGCACTTTACATGTGCAGTGGACACTGAAA
ATATTAGGCGTGTATTTAATGACTGTCGAGATATTATACAACGTATGCAT
TTGAGGCAGTATGAACTGCTCTAGCATGGTCGATATGTCTACCCTTTATC
ATCATGGTTGTTTTGGTTAGAAACAAACGAAAACGTCAAAAATGTTAAAG
GTTAAAATAAATATCACGATGGTCTCAGGGTTGTATCAAGTACGGTCTAG
TACACTGTTCACCAACCAAAAGACATGTCACTCAAGGAGGGGAGATTTTT
ACACCAATGAAATACGATGGTCGTGTTTCAGCCAGTCAGATTATTCGCGG
GGCGATGAAAATCTGATAGATTTTGCATGTTTTGAGGAAAACGAGTGCTT
TAACTAAAGGGAAGCCAGGATCCTTAACTCCAGAGTTCCCGATCGATATA
AAAGATCTGAAACGTTTGACGTTAGCACGTTTTTTACACGATCCAATTAC
AGCTTTTATTTGGTATTGAACATTCAACGAGAGAATTGCTTTCAAGAGCC
TTTTACAATGCTGCTATGTGTTTTTTGCAACAACATACCAGGAAAAATGT
TATTTATAATGATAATTGACAAAAAAGAAGATAcaatatttggaaaaatt
atgaGTTATAAAAGAAAAGGAAACTGTTAATAAGAGATAATCAAACGCAT
TGAATCGCTGAAAATTATTACACCCATGCTGCTATACCATGTTGTCATAA
GAATTCGTTTTCAATACGATTTTTAAAGTGATAATGTTGTTTTGACCTTT
CCAACGAGTAAGAATTGGTTTTTGGTCAATGTTTCGCTGCAATTCAACCA
CAGGGTGTTTATCGAATGAAAAGTGAATATTCTTATTTTGCTG
Run BLAST on NCBI

transcript from alignment at sc0000566:1..16425+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026258 ID=TCONS_00026258|Name=TCONS_00026258|organism=Clytia hemisphaerica|type=transcript|length=16425bp|location=Sequence derived from alignment at sc0000566:1..16425+ (Clytia hemisphaerica)
ttgttgttgtttttgtttttattattgttgttgtttttgtacaTGTTGTA
TGGAATTATTTGGTTTAGTATGTTTGGTAGAGTATAGTTCTAAGAGAAta
ctgttttattttgtttaaaggTGCTGGTGAAAGTGGTAAAAGTACGATTG
TAAAGCAGATGAGAATTCTTCATGTGGACGGATTCAATGAACAGTAAGTT
GCCATGTTTTTCACAGATAAGGGGCTCCTCCTTAAATTATAATTGTCCTA
GATTCATGTTAGATGGAAGCtaaattctaaaatttctaaCTCTGATTTGA
AAAACATTCTATCTTCGTTTCTagggagaaaaaagaaaaaatagagGATA
TAAAACGAAATATAAAAGAAGGAATACTCGTAAGTTTATTTTATTGATCG
TTTAGCTGTTTTCATAACACTGCCGTTCTCGGTCCTTTTCGTCGAAAATA
ATATCACGTGATAATTATCCGCGCACAGATTTTCGCAGTACAAAACCTTA
TTCGAAGCAGTCACATGACTAAAATATCACGTGCTCATTTCgttcaaaac
aacattttccgTCTCTATGTGGCTGAAAAGTTGCGTAGCTGCAAAATATA
CAAGGCTCGGTTAAAAGGTCATATTATCCCAAACATACAAACTTTGTATA
ATAAGTTTCCTCCCttctaaattttgacaaaataacaGCTCGATAAAAAC
TTAGGTCATCCTTGGCATTTTTTTAGATCCAAATTATGGCCTATGAACTC
TTTTTACACTCAAAAATGAAGACTGTTGTTTGCTTGAAATGTAATATTTT
GGTTTAAGTCAAAGTTTCTTTaccatttcaatgttttttatatttatttt
ctatGACTACATTCAAACTAAAAACACCTTAGTTCCACTGCTCATAAGGC
AATCTTGAGGTTATTTTGTTTGAGTCTAGTATGACAAGTTTTCGTTGATA
GAAATAAGACATCAACACATTACAGTATCAGCCAGTTTCGCCTCTTTTGC
CAAAGACACTCCTAGATAATCTAGAGTTTTTTATTGATCTTGATTTGTCT
CCCTGTAACCTGAGATccgattgtggttgttttctgcccaccacgctgaa
gctctaaagggatgggtgaaaacatacaatctgacgaatatgctatctca
aaatcgtaaggaccggtttgtctaaaaggactggggatgacaacaaagtt
gcgtgattgtgtttacaAATAGGgagccgtatcagtttttgactttctgg
cgcacaacaagattcttgttgtaaaatttcccgcgggaggactattttcc
tcagatgtacaattttcaagtgccttcagaggtttaccgtgcatgtaaga
aaattatgaacagctgttatcaggttatctCCCTGTTGCTTGCAAACCAA
CacccttcaaaaaagcagtgGCTAGCTCAATGATTTCTTTTGGTTAACAA
CACAAACTGGCTTGCATGATCATTTACAGAACAAGATTATGTTGGttatt
ttttcctcattttttttgtaatcacAGTAgttagagtctctttaactcaa
acTTCTATAACTGGAACAAGTTTCGTTCCGTTTTTGCGTGGTCTTCTCAT
ACTGCAAAGGAGAAATTCCCTGGATCGTTTTTAGACTGTTGTAATTACAT
TTTTGAGCTTAAATCAAACTAGCCTGGAAATCCAAGCGTTACACTTTTtc
cacagtctagtttatgatatgtttgctgcttgtttaacgcttggcgcagg
taactcgcctgcaaaatcaaaacaaaatggtacagtagagctgtgagcgg
agctgcgtagtttatttgttttggaattttgctgctttgagtggtcagtc
atttgatggctatgcaagttagcctccactgatgcaatcCGACTTCACAG
TATAAATTTAACTTCTACTATTCCTATGATGTTTTGTATGTATTTGTAAA
TGCATGGCCCGAATATGAACCGAACAAAATGTTCAGGCTGATTCAGCCAT
ACTTTTTTGTGACCTGAGCATGGTGCCATATGGAAATTGCCTTTTCGTTG
TGATTGGCTATTTCAGTGAATTGCTTGTGTTTAGTGTCACCCAGGCTGAG
GGgcagaacattttgaaaatttgcctCTCATTATTGGCTTAAAACTCATT
CATTTTAATGGCATTAATTATTTCTAATAATGAATCTTGAAAGAAGGAAA
GATAAGCTAGATCATTGCATAGAAAATGACTCTTTCTTtaagatgttttg
aaaaaggtaCGAATCTAACATTCTTTCTACTGCCTCAAAAATGTTTGAAT
TGGTTTATTACAAAAACAAGCTAAATGAAAATAATCGGCAGAAAATGATT
ATTCCAAAAGATTGGACCAACATTAACCAAACAGTATAGGATTAATATAG
ATCACTCAagcagttagtggaagtacatCGATTTGTGAAGCGTCTTTATG
Taacatagaacaaaagaaaaaagcaaaagaacaaaggaattacccatagt
CACCATTTCGCAACCATGGGGAAGTTTCATTCTTTCCCATaaatgtgaaa
atgaaaaacaaagaagcttttttcgttttctgatagtctttttaatctgc
cataaAGTGTTGTAGAAACAGGAGTTTTATGGTAACCTTGGCGCATCCTA
GCGACGTCATtaatttttatttagttttcaaattttacaattgTGTTTTA
ATAATATATATAAAGAAGTCCTGAAACTGGTAGAAAGACACATTCTCCTA
CAAAGAGGCTTCAAAACAATGACGTAGAAAAAGGTTGTTATAAAGTGTGc
ctttttatcttaaacaattTCGTAAACTATGTCACAACCACGgagcgctg
acttttagttttatgacttgttctcactcgtttggtttcagtaataaaaa
gaaagtcgttattgtaaactttgaacatgcttaaaatcgaggtacttcca
ctaactgtcaAGTATTGGTTGTTTATTTCTTTacatctgaaaattttttt
gggttggtcatttttttttctggtgGATTTTAACTAAACCGACCGCTATC
TCGATTACTGACTGAATGGTACTATTTAGTAAAGCTACCAGATCAGAATT
TGCAGCACAGAAATAGAATTAATGAAGTCTTTTAAATTTCCtacaatttt
agattttatgtttttataatgGAGCATCCTGGCTTAAATCTATTTCTTTG
AtaatcaattttattgtttgGTAAAAGAAAAGGACCGAGACAAAGTGTTA
ATATTGTGTGTATCATTGTTATATTCATAGTTCGGACCCCCCGTTTCTTA
agggggggatgacaccttccaaaaaagtgaagaagggtgggggatcagaa
attttcattaaaaaggggggggggatagcaagaaggggggggcttacata
tattgtagatgtttttccagcactgttatgaaatttggtctgcatgaaag
gaagttctttattttcactaaaaagtggtattatatttgccagacttaat
ttttctttactgtttcccttccctttttaccatgaaaattttagcccaaa
acccttgggggataggcatttttaaaggttggggggataccaagatcaga
cccctttccgcactatgataTTATAATTCTTTACCTTAATGCCCTTAATT
TTCGCGCGCCTTTTATTTTCGAGCCCTATAATTTTTGCGCCTTTAATTTT
TGCGCACCCCTTAAAAACGACCTTTCGTGCatcctttaattttcgcgcac
ccATATTATCATCAATTTTCGCGCATCCTAAAATTTGTTTCTCTTTacat
attttacatatttttttctggctgttttctagtcaaatcctcataaaaaa
gtctccaaaaggcggacactctaattagcggacactaataTGTTTCACCA
ATGGTGTCTGCTACTTAAAGGCTCCACTGTACTATGAAtaacatattttt
atcaaaaatccttAGAAAAGCCATAAGTGACTAAAAATGCCTTATTTGCT
AATCCGCCCACCTTTTGCAACCTTATCCGACCTAGTGCGCAAAAATAGGT
CTTTTTCGCGTATCCTTTAATTTCTGTGCAGTGGTAGTGCGCAAAAATTA
AGGGCGCGCGAAAATTACGGGCATTAAGGTATATAGTTTTTACACAAAGT
TTGCAGTTGTCTGATGCATATCTTAAATTCTGTCTTTTTTCTTCAATGGC
CTTATGTTTACTTCATGCAATTCAAATGAGACTagattcaaaaaaatgtt
tgtttgctgTCATCCAGGCTGCATCATTTAAGGCGTGTGATAGCACGCAC
ATgcctccacacacacctaaaatctCTGAGGGGTGTGATCAATCACACGC
CATAAATCCAAATTTCACTACAcagcactccttatcacacgcctaaattc
caaaaaataaagtttgtgGAGTGTGATTGACCATACGCCTGCATttttca
aatgacaaagccTGGTCACCTGACCAACTCTAACTTGAAACTTGTCAACC
CCTAAAAAGTTATTGCCATTATTATACCAAAAGGTATAATAAACACGCGG
TACTAGTTACCACTTTTTCCCGTTTATCAAAGTTCAGTACACAATTGAGA
ATAAACGGTAATATAGTGTGCAGAGAGGTCtggcccccccccccatttat
aTTTCATCCCCCTGTATTATGCATCCCcctattttaaaaaatttttgaac
tCGCACTAACTACAGTGGTGGTTCACAAACCATTTAAtaccaaaaaattc
aaatttatatgGTAAGAAAGGGTATAAAATGATGCCGCGGGtgaaaaatt
tgccatttaCATTGCCATTTTGTTGGACCTATACCCAATTCTTTGACCAA
TTTAAGATATAATAcatatttttaccaaaaagttGTCATCCCcctatttt
tatttaatacCCCACTAAAAACTCAAACCTCCCCATTTTACTCGGTAAAT
CTCTCATCCCCCCTATACAGCCTTTCTTGAAAAGCTGGATCCCCCTTAAA
GAAGAGNGACCTTATCCGACCTAGTGCGCAAAAATAGGTCTTTTTCGCGT
ATCCTTTAATTTCTGTGCAGTGGTAGTGCGCAAAAATTAAGGGCGCGCGA
AAATTAAGGGCATTAAGGTATATAGTTTTTACACAAAGTTTGCAGTTGTC
TGATGCATATCTTAAATTCTGTCTTTTTTCTTCAATGGCCTTATGTTTAC
TTCATGCAATTCAAATGAGACTagattcaaaaaaatgtttgtttgctgTC
ATCCAGGCTGCATCATTTAAGGCGTGTGATAGCACGCACATgcctccaca
cacacctaaaatctCTGAGGGGTGTGATCAATCACACGCCATAAATCCAA
ATTTCACTACAcagcactccttatcacacgcctaaattccaaaaaataaa
gtttgtgGAGTGTGATTGACCATACGCCTGCATttttcaaatgacaaagc
cTGGTCACCTGACCAACTCTAACTTGAAACTTGTCAACCCCTAAAAAGTT
ATTGCCATTATTATACCAAAAGGTATAATAAACACGCGGTACTAGTTACC
ACTTTTTCCCGTTTATCAAAGTTCAGTACACAATTGAGAATAAACGGTAA
TATAGTGTGCAGAGAGGTCtggcccccccccccatttataTTTCATCCCC
CTGTATTATGCATCCCcctattttaaaaaatttttgaactCGCACTAACT
ACAGTGGTGGTTCACAAACCATTTAAtaccaaaaaattcaaatttatatg
GTAAGAAAGGGTATAAAATGATGCCGCGGGtgaaaaatttgccatttaCA
TTGCCATTTTGTTGGACCTATACCCAATTCTTTGACCAATTTAAGATATT
ATAcatatttttaccaaaaagttGTCATCCCcctatttttatttaatacC
CCCCTAAAAACTCAAACCTCCCCATTTTACTCGGTAAATCTCTCATCCCC
CCTATACAGCCTTTCTTGAAAAGCTGGATCCCCCTTAAAGAAGAGGGGTT
CACACTATGACACTTCTAACTGTTTTTCTGACAAtttgttttagagaatt
aaaattcttttcttctaaaagttaaaactttctactttaagggaacttat
cttgacgagaactaattttggcaaaattggcGAGCAAactcaaaatttgc
caaatctagttcccaccaaaattaattttttaggtcatttgccaaattaa
gttctcgccaaaattaaaaaaatcattgattcaccaaaataagttcttgc
caaaattaaaaattttgttttttgcctaaataacttCCTGAGTTCgtaaa
aaaagcttcaaataaggcaaaatagaacagatttacgctgtcatttgCCA
AGATAAGTTCCTCGCCAAAACTAAAAAATCAttgattcgccaaaattagt
tttcaccaaaattaaaaaactattttgaaTCGACCATTCGTCAAAAATTA
GTTCTCACCAAAAAAGTTCCCTGAACGTATTCCGTTCAATTTTAAGCTTA
AATACAGTTGGAAATTCCCTTCTAGCTTGTCTGCTTTTCTTCAAAACTAT
TTGAATGTAGACCCAACTTTCAAAATCTAGGGTTGGGTAACAACAAACTA
CCATTTTTTAAAGTGCAGCCTGACTTCATTGTTTACATCAGGATGATTTT
CTTAATGGTAACAACACTTAAAAATCTTATTATTATGAATTAATTCTAGA
CTGTAACAGGTGCAATGAAAACTATATTACCGCCAGCTACACTGGAACAT
CCAGAAGAACAATGGAGGATAGATTGGCTACATGAAAATGCAGCCCCCGA
TGAAGAATTTGAATATCCTCaagtaaatttttctttattcctAGTAGGGT
GTAAACTGGAaccatgaaaaaatactttttttggattttcaaaattgtca
caattttttatcaaaatttatcatattgtaagactttttgcgcaattttg
AGGTCCATAAGTCAAAAATCCACTGTTTGCCCCAGGGGTATCTGATTCGC
GGTAGTagcaaaaaacggcaaaaatggcANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAG
Actataaaaggccaggaaatggtcaaaatggtttctaaatggtgtcttgt
actaatattcaacacaaaaagacaaaataaccccagcgagatcgctcaat
atttcaatttcaggctaaaaaggccgATTTTCTCAGATTCTGGGttgcaa
aatgcatgaaagcagcatttttgaggacccacaacttttaaactttttaa
ggtacacacttgaaattttcagcaatgaaacacttcagagaaagctccaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNctccaggaaaaatcaaacttgagttt
tcaaatatttcctataaatccataatggcgccctagaaattgagttttca
tgctaaatgccaatatttcaagctaaaactcagttttcttgggctaaaat
ctaaaaaatgatttcaaatggtgttctgaaatctttgaatcttggaagta
ttctgaaaatactctgggagaatcaaaatggtttgggtcNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNatggtttgggtcagaaatttgcccaagtctg
ccattatggtattgcatttcccactaaaacgcaatatttagagttaaagt
ctgattttctcaggctaaaatcgcaaaaatgctttcaaatagggtcctga
aatttttggtgttgaaagtattctggatctactctgggagaaccaaaatg
gtttgggtttgaaatttgcctaagtctgccaatatggtattgcatttcct
actaaaacgtgatatttaagagttaaagtctaattttctcaggctaaaat
ctcaaaaatggtttcaaatagggtctgaaatttttggtgttgaaagtatt
ctggatctactctgggagaaccaaaatggtttgggtttgaaatttgccta
agtctgccaatatggtattgcatttcctactaaaacgtgatatttaagag
ttaaagtctaattttctcaggctaaaatctcaaaaatggtttcaaatagg
gtcctgaaatcttttggtgttgaaagtattctgggaaCACTCAAGGAAAA
TCATAGTGGTTTACAATGGTCATATatatgccaaagtctgccattatgaa
tttcatttctttaggaagaacacttaagcttactcaaaacattgtgtttt
agaatgagatacaattccataatggcagactttggcaaatttctgacgAA
AACCATCTTGGTTTTCCcatagtatttccagaatactttcaacaccaaaa
gatttcaggaccctatttgaaatcacttttgagattttagtctgagaaaa
tcagactttaactctaaatattgcgttttagtggaAATGCAATTCCACAT
Tgcggactttggcaaatttctaacccaaaccattttgattctcccagagt
tttcctgaatactttcaacacccaaagatttcaggacaccatttgaaacc
atttttgagattttagccagagaaaaccaagttttagcttgaaatattgg
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGACCTcaaaattg
cgcaaaaagtcttacaatataataaattttgataaaaaattgtgacaatt
ttgaaactctaaaattcaaaatccagTTTACACCCTATTCCTAGGCTTCA
AGTTACCCTAACTTCACTAAGCCTATTAATTTTAGAAATTATTGGTCAAC
AATGAAGAATTTGAAACAACTTGTCATTTTTAAAGTGCTCGATACAAACA
AAGTAAATTTAACATTAAGATACAATTTTGACATAATAATGTGATATTTT
TCAGTTAAGCATAAGCCATAAGTCAAATTTCTttatacaaaaaagaaagt
atctcaaaaaaatcaaatttcgtaaAAACCTATTTTGTAACTTACATACA
CATACCTTAGGttgataaaaattcttattattttttttaggacttTTATG
ATCATGTtgaaatcctatggaaagacaAAGGTGTCCAAGGATGTTTTGAA
AGATCAAATGAATATCAATTAATAGACTGTGCACAATAGTATGgttatgt
ttttgcttttgtttttgttgaagaacaaaatttctaatttaaattttaat
gTTAAGGATGAATGTATGGTAGGAATTGGTTACAGGATAAAATGGAAAGG
AATATGAcattattttctcattttttgaagTTGGTTGACTTGTTCACCCA
GATAGTGGCATGGAaacaagaattaaaaaaaatgttttacttctgcattt
ctgtaaaagaattgaaaaaaaattgtttttgaaaaatctttaacttaaaa
gtttagaattgaaatgattttttgtcTCACACAAAATTTCCAGTCAAGGC
AAGTTCCTCTTCAATCTGTTTCAATTATAATATTAATTTCAACTACTTTA
TATTAACCCTGTGATTTTATCTTTCATTCCAGTTTTCTCGATAGGACTTC
TGAAGTTCGGAAAAAAGACTACAGTCCCAGTAATCAAGTAAGTGTAATCT
GACTTCTTTTGTAACTTCAACTGACAATTGTTGATGCTGATTGTTggtca
gaaaaatttattttgacaaatttgtTCAACATAATCAGCAATCTATTAAC
ATAAAGGTAATCTTGAAAGGGAAACAGAAGAGCCAGGCTATACTACtggc
tttcaaaaaaaacataccaaagatgaataaaactgtatatttcaagaatt
tttgataatttagaagcacaaaaattgagttttaaaGAGACTGTTTTTCG
TTTGGTGAAAAAGGTATCTTTCTTTCcctaaaattcaattttttaaacaa
cCTAAAGTTGCAGCAAAGCCTTTTTTGGAATTCAACTAAACTGCATGAAC
TGTTTCTCTTTACCATTATGTGAGCATGTTTCCAAATTAATTCTAAATTC
TCTTTCAGGACTTATTACGCTGTCGTGTTTTGACGCGTGGAATTATTGAA
ACAAGATTTCAAGTGGATAGAGTAAATTTTCAGTAAGTTCATGATAAGAC
TGAAACacttgattctttttttttcatttctatttATTGGTTATAAATCA
ATCTTGTTAACAGTTTGAGATGTTACTGAAACTacaacaaaattttgatt
ttggcataGATTTTTAATTATCTTTGGAAATCTGGAATCTAGAACCTTGT
ATTCTATGCAATTTTGTATGTTTCTGAGGTCTGAATTCAAACTCTGTCAT
TTTCAGCCACATTGTTTCACGccacattttttaaatatctggttTGATAC
CAAAGCAGATTTCAGTAACATACTTAAGGAATGATTGGCTCCGTTGAAAA
CACATTTCTCATGCCATACTCAGACCAAAGTACAaatgttttcttaaaaa
gtaaaatattgtATCTGTATAATACATCTTAAATGTTGTTTTCCTTGTGT
TGACAGTGCCAGGTTTTTGTAATCTCATTAACTAACAAGCCCTGTCTTTT
CCAATTCATTTTTTTAGTATGTTTGACGTTGGTGGACAAAGAGATGAACG
TCGAAAATGGATCCAATGTTTCAATGGTACAATTTTAGTACTTTGATCAA
TTCTAATTCTTCTTAATTATAAGATGCTAGTGTAGTGAACTCCTCTCAag
gtgaaattgaaaaaaatgtaccTTGAGTGTTTTCCACTTCTTCAATTAGA
TTAATTTTGCaagccaaaaataattttcttgtttttttttgtaaatcaaT
GTTTTCAAATACATTATGTCGATTTAATTTGTTGAATCAGCCAAAAATCA
GTTGGAGAATGGtcctttaaatttttctttgtaaaaattgtaaattaacA
GGGTATTTAAAgctaaaaatgtaattttaaaaagtttgcaTTGATCTCAT
TTTGTGTGTTACAATCTCACacaatttcgtgagtttttgtaaaaaaggca
acaatttgcaaaaaaaattaaattaatctCATTGAAACATATTTTATTGT
GAACTAAACCAGACAATTTTATTCAATACAGATAATTGTCCTTGAATTAA
TAAAATACACTTTTAAAGTGTtacaaattttaataaatttttaaaatcat
gcTCAGTTGCATTATCTTGAAAGGATGTACTATTATTTAGGCTACAAGCT
TCGCCATTTAGATTTGACATTCTTTGTGTTATCAATGTCTAATGTgatca
ttatttttctatttcagaTGTAACAGCTATTATATTTGTTGTTGCGTGTA
GTAGTTATAATCTTGTATTACGAGAGGATCAAACACAAAACAGATTACGT
GAAAGCTTAGAATTATTTACTGGTATATGGAATAATAGGTATAACATTTC
AAAATCTTATTCCCTTTCTTCATTTTACCTTTAAAGAATATTTGACAAGT
CTATTAAAATTTGCTTTAAAACAGcacttttgaaacaaaaaaaatttctc
ccttCTCCGTGCTGTACAAGCACAAAATCTGAGAAATTTAATTGCCCTGT
GCAAGCACagaatttgaaaagtttcatTGTTTTGTTAACATGATAGGTGT
ACCTGTTTTGTATATCTTAAAACAATATCTAATATGGTAAATctataaaa
tcgaaaaaactattatttcattgtttttggaTAAATGAATGTGTTGTTTA
TTTCccttccttttcttttttcaggtttCTAAAAACTATATCCGTGATTC
TATTTCTAAATAAACAAGATTTACTTCGTGACAAAGTGCTGGCACAAAAG
TCAAAATTAGAAGATTACTTTGCAGATTTTGCAAGATATAGGACACCTGA
AGACGGTATGTATCACACCCATGAGCATATTGCAGACTAATCCTAGCACA
TAGATTTTATAATCAATCAGTTAATTTTTCTGACCATTAAATTTAGAGTA
TTTTCTGGCTGCTGCATCATGAACAGTAGTTTCtggtttattaatttttg
attgttttTGTTTTTGTTTTTGTTTTTAGCCATAAAAGAAGCTGGCGAGG
AAGATGAGGTGACCAGGGCAAAATATTTCATTAGGGACGAATTTTTAGTA
AGTACAGTGTTATCTTTTTTTATAGAGCTATGAGGAAAACTCACCTCTAT
TGTGTATGTAGTTTATTTGGTTGCAGGATGCATTTTAGGCCACATTCTGT
AACTATCTAGATTTTAAATGCTTTGATTGGATATCGAACAATTGACATGC
ACATATGTACCAAATTCGATCAATATCTTTTAAATCTGTTTAAATTTGTA
TGTAAACAGTTAAAAACAGGTTATTAATTATTAGTTTTGAATAAATGTTT
TTTTAAATCTTTTTTACAGAGGATAAGCACGGCAACCGGTGAAGGGAAGC
ATTACTGTTATCCGCACTTTACATGTGCAGTGGACACTGAAAATATTAGG
CGTGTATTTAATGACTGTCGAGATATTATACAACGTATGCATTTGAGGCA
GTATGAACTGCTCTAGCATGGTCGATATGTCTACCCTTTATCATCATGGT
TGTTTTGGTTAGAAACAAACGAAAACGTCAAAAATGTTAAAGGTTAAAAT
AAATATCACGATGGTCTCAGGGTTGTATCAAGTACGGTCTAGTACACTGT
TCACCAACCAAAAGACATGTCACTCAAGGAGGGGAGATTTTTACACCAAT
GAAATACGATGGTCGTGTTTCAGCCAGTCAGATTATTCGCGGGGCGATGA
AAATCTGATAGATTTTGCATGTTTTGAGGAAAACGAGTGCTTTAACTAAA
GGGAAGCCAGGATCCTTAACGCCAGAGTTCCCGACCGATATAAAAGATCT
GAAACGTTTGACGTTAGCACGTTTTTTACACGATCCAATTACAGCTTTTA
TTTGGTATTGAACATTCAACGAGAGAATTGCTTTCAAGAGCCTTTTACAA
TGCTGCTATGTGTTTTTTGCAACAACATACCAGGAAAAATGTTATTTATA
ATGATAATTGNGTTTTTAGCCATAAAAGAAGCTGGCGAGGAAGATGAGGT
GACCAGGGCAAAATATTTCATTAGGGACGAATTTTTAGTAAGTACAgtgt
tatctttttttatagAGCTATGAGGAAAACTCACCTCTATTGTGTATGTA
GTTTATTTGGTTGCAGGATGCATTTTAGGCCACATTCTGTAACTATCTAG
ATTTTAAATGCTTTGATTGGATATCGAACAATTGACATGCACATATGTAC
CAAATTCGATCAATATCTTTTAAATCTGTTTAAATTTGTATGTAAACAGT
TAAAAACAGGTTATTAATTATTAGTTttgaataaatgtttttttaaatct
tttttacagAGGATAAGCACGGCAACCGGTGAAGGGAAGCATTACTGTTA
TCCGCACTTTACATGTGCAGTGGACACTGAAAATATTAGGCGTGTATTTA
ATGACTGTCGAGATATTATACAACGTATGCATTTGAGGCAGTATGAACTG
CTCTAGCATGGTCGATATGTCTACCCTTTATCATCATGGTTGTTTTGGTT
AGAAACAAACGAAAACGTCAAAAATGTTAAAGGTTAAAATAAATATCACG
ATGGTCTCAGGGTTGTATCAAGTACGGTCTAGTACACTGTTCACCAACCA
AAAGACATGTCACTCAAGGAGGGGAGATTTTTACACCAATGAAATACGAT
GGTCGTGTTTCAGCCAGTCAGATTATTCGCGGGGCGATGAAAATCTGATA
GATTTTGCATGTTTTGAGGAAAACGAGTGCTTTAACTAAAGGGAAGCCAG
GATCCTTAACTCCAGAGTTCCCGATCGATATAAAAGATCTGAAACGTTTG
ACGTTAGCACGTTTTTTACACGATCCAATTACAGCTTTTATTTGGTATTG
AACATTCAACGAGAGAATTGCTTTCAAGAGCCTTTTACAATGCTGCTATG
TGTTTTTTGCAACAACATACCAGGAAAAATGTTATTTATAATGATAATTG
ACAAAAAAGAAGATAcaatatttggaaaaattatgaGTTATAAAAGAAAA
GGAAACTGTTAATAAGAGATAATCAAACGCATTGAATCGCTGAAAATTAT
TACACCCATGCTGCTATACCATGTTGTCATAAGAATTCGTTTTCAATACG
ATTTTTAAAGTGATAATGTTGTTTTGACCTTTCCAACGAGTAAGAATTGG
TTTTTGGTCAATGTTTCGCTGCAATTCAACCACAGGGTGTTTATCGAATG
AAAAGTGAATATTCTTATTTTGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014762XLOC_014762Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026258-exon-sc0000566-1491911889:1..193TCONS_00026258-exon-sc0000566-1491911889:1..193Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:1..193TCONS_00026258-exon-sc0000566-1510915933:1..193Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:1..193TCONS_00026258-exon-sc0000566-1575043694:1..193Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:325..379TCONS_00026258-exon-sc0000566-1491911889:325..379Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:325..379TCONS_00026258-exon-sc0000566-1510915933:325..379Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:325..379TCONS_00026258-exon-sc0000566-1575043694:325..379Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:6700..6822TCONS_00026258-exon-sc0000566-1491911889:6700..6822Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:6700..6822TCONS_00026258-exon-sc0000566-1510915933:6700..6822Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:6700..6822TCONS_00026258-exon-sc0000566-1575043694:6700..6822Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:11191..11288TCONS_00026258-exon-sc0000566-1491911889:11191..11288Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:11191..11288TCONS_00026258-exon-sc0000566-1510915933:11191..11288Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:11191..11288TCONS_00026258-exon-sc0000566-1575043694:11191..11288Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:11683..11737TCONS_00026258-exon-sc0000566-1491911889:11683..11737Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:11683..11737TCONS_00026258-exon-sc0000566-1510915933:11683..11737Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:11683..11737TCONS_00026258-exon-sc0000566-1575043694:11683..11737Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:12159..12232TCONS_00026258-exon-sc0000566-1491911889:12159..12232Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:12159..12232TCONS_00026258-exon-sc0000566-1510915933:12159..12232Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:12159..12232TCONS_00026258-exon-sc0000566-1575043694:12159..12232Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:12718..12776TCONS_00026258-exon-sc0000566-1491911889:12718..12776Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:12718..12776TCONS_00026258-exon-sc0000566-1510915933:12718..12776Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:12718..12776TCONS_00026258-exon-sc0000566-1575043694:12718..12776Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:13418..13538TCONS_00026258-exon-sc0000566-1491911889:13418..13538Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:13418..13538TCONS_00026258-exon-sc0000566-1510915933:13418..13538Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:13418..13538TCONS_00026258-exon-sc0000566-1575043694:13418..13538Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:13875..14005TCONS_00026258-exon-sc0000566-1491911889:13875..14005Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:13875..14005TCONS_00026258-exon-sc0000566-1510915933:13875..14005Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:13875..14005TCONS_00026258-exon-sc0000566-1575043694:13875..14005Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:14180..14247TCONS_00026258-exon-sc0000566-1491911889:14180..14247Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:14180..14247TCONS_00026258-exon-sc0000566-1510915933:14180..14247Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:14180..14247TCONS_00026258-exon-sc0000566-1575043694:14180..14247Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:14520..14572TCONS_00026258-exon-sc0000566-1491911889:14520..14572Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:14520..14572TCONS_00026258-exon-sc0000566-1510915933:14520..14572Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:14520..14572TCONS_00026258-exon-sc0000566-1575043694:14520..14572Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1491911889:15563..16425TCONS_00026258-exon-sc0000566-1491911889:15563..16425Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1510915933:15563..16425TCONS_00026258-exon-sc0000566-1510915933:15563..16425Clytia hemisphaericaexon
TCONS_00026258-exon-sc0000566-1575043694:15563..16425TCONS_00026258-exon-sc0000566-1575043694:15563..16425Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000566supercontigsc0000566:1..16425 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.5167	3.75898	0.182765	3.64322	264.859	158.151	236.101	251.139	57.6866	101.521	48.2518	70.9155	57.6337	27.1929	44.4898	32.2313	39.2907	36.5868	43.8539	58.7755	65.5923	34.2824	72.3027	50.3949	42.6049	65.7941	71.3426	15.0866	26.48	46.5594
Blast
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BLAST of TCONS_00026258 vs. Swiss-Prot (Human)
Match: GNAL (Guanine nucleotide-binding protein G(olf) subunit alpha OS=Homo sapiens GN=GNAL PE=1 SV=1)

HSP 1 Score: 506.908 bits (1304), Expect = 4.172e-175
Identity = 247/338 (73.08%), Postives = 293/338 (86.69%), Query Frame = 3 
Query:  108 ILFKGAGESGKSTIVKQMRILHVDGFNXXXXXXXXXXXXXXXXXGILTVTGAMKTILPPATLEHPEEQWRIDWLHENAAPDEEFEYPQDFYDHVEILWKDKGVQGCFERSNEYQLIDCAQYFLDRTSEVRKKDYSPSNQDLLRCRVLTRGIIETRFQVDRVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVACSSYNLVLREDQTQNRLRESLELFTGIWNNRFLKTISVILFLNKQDLLRDKVLAQKSKLEDYFADFARYRTPEDAIKEAGEEDEVTRAKYFIRDEFLRISTATGEGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1121
            +L  GAGESGKSTIVKQMRILHV+GFN +EKK+KI DI++N+K+ I+T+  AM TI+PP  L +PE Q+R D++ ++ AP  +FEY Q+F+DHV+ LW D+GV+ CFERSNEYQLIDCAQYFL+R   V   DY+P++QDLLRCRVLT GI ETRFQVD+VNFHMFDVGGQRDERRKWIQCFNDVTAII+V ACSSYN+V+RED   NRLRESL+LF  IWNNR+L+TIS+ILFLNKQD+L +KVLA KSK+EDYF ++A Y  PEDA  +AGE+ +VTRAK+FIRD FLRISTATG+GKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL+QYELL
Sbjct:   45 LLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYI-KSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL 381
The following BLAST results are available for this feature:
BLAST of TCONS_00026258 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNAL4.172e-17573.08Guanine nucleotide-binding protein G(olf) subunit ... [more]
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