TCONS_00026154 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026154
Unique NameTCONS_00026154
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2321

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026154 ID=TCONS_00026154|Name=TCONS_00026154|organism=Clytia hemisphaerica|type=transcript|length=2321bp
CAGACGTTTAAGTCTATTTTATAGCAGTGGAAACCATGTTACGAGGGCAT
AGATGGTAAACAATGCAAGGACATTGACGAATGCGTGAGGCATGGACCCG
AGTTATGTCAACAACAGACCAGATCGAACAACACGTTTTGTATCAACACT
GATGGAGGATTTTTCTGTAACTGCACAGAAGGTTTTTACAAGAAGAAGGG
GCTTTGTATTGATATAGACGAGTGTGGTCGTGATCCTTATCCTTGCCATG
CAGAAGCCACGTGTCTCAACTCTCCTCCTGGTAGTTATTCTTGTGAGTGT
GACCAAGGTTGGTTGGGAAATGGAACTCATTGTGAAGATATCGATGAATG
TAAACAACCTGAGAAATACAAATGTGCAGTCAACGCCACTTGTCATAACT
TTCTCGGTTCTTATCGATGTATTTGTGATCATGGTTTCAAAGGCGAAGGT
TCTGACAATTGCGAACcacTTGGTTGTTTCCCACCACCTGGTTGTTCTGG
TCAGTTCCTTGCTAAATGGTGGAGACGCATTCCCTACATCGAGCAAGATG
AAGCACACGAAAAAGCTGAAGGCCTCTTCAAAGACATCCTCAACCTCATC
ATCACTGATATTTGTCAGAATTGTTCACAAATCTTGTTCGACATGCCACC
TGCGAATAATTCGAAAGAAGTGGAAGACCAGGTGGAAGCTAATCAAACAG
ATTTTGGATGCCCAATGTATGGATCTAAGGAACAAGAAAGCTTTCGAGAT
TTCCCTTTCATCCCCATTGttgAATCACCAGGCGTAGCTTTCTTTgtcaa
agatatcaaacaaacgTCAAGCCCTTTGCTTGGTTCGTTGACCGGATCAT
GGCCAATCTTAGTGATGACACTTCTCTTGGCTTCTGTGTCTGGTATCATC
ATATGGTTCTTGgacacGATTCAAAATCCAGATGAATTTCCACAATCATT
CCTTCAAGGGTCCTGGGAAGGATTTTGGTGGGCTTTCATTACCATGACAA
CAGTCGGATACGGGGATAAAGCACCTCGCTCTTTTTCTGCACGTTTATTT
GGAGTCTTTTGGATCTTAGTTGGTTTGGTCATCATTTCAACTTTTACGGC
AACGATAACGACCGTTCTGACCACCACAACTTTGACAAGTGAAACCAAAA
TGTACGGAACGAGGGTGGGCGCTTTAAACAATTCCGAGGAATTCCGATTG
GGTGTTAAACGGAATGCCGATATTCAAGAATACAACTCCATCCGTGAGAT
CATTCAAGCTTTACAGCGCGATGAGATCCAGGGTGCATTGCTAGACACTT
ACATTGCCGGTGAATATCAATCAGATTTGAAAGAATATAAACTTCAAGAG
ATTCTGGAGCATGTGTTCGTCTATGGTGTTGTATTAGCTAGAGATGCAAT
CCAACTTGAGAATCGGATGAGAACATTCACAGAACAGAAACAATCCACTA
TTTATAACACTATTTCCAAAGTCATTAAACCATTGAAGGAGATTAAGCAT
GGGTCAAACACGGTGACTGAATCGGTTGGGTTGTTTGATTCTTCGTCATC
TTTCTTTACCAAGACAATGATCTTTGGCTGTATCCTTCTCGCTTTCTTGG
TCATTGTTGGATTGCTTTGGGATTGGTTGTGGAGACAACAAATGGCCAAA
CAAAAAGCTATGGACAGCGACAATCGAAAGGACTCGAACGGTGGTAATTG
GTCATCTACAGATATCATTGAATATCAACAACATGCTTTTAAATCTGAAG
TGACAAACCTCCGAGAACAAATTGCTTCCTTTGCGAACACGTGGGTCAAT
CGTTTGAATGAAATCGAAAATCATCATGAGGATCAGCTCACCAAAGTACA
AAGCTGGCTTTCCAAGACCAATTTGAACAAATCAAGTGGTAACAAACGAA
AAATGTCGAAGAATTCACAAAACGGTTGGCTGCATCATAAAATACCACAA
GAAGATTTCTTGTAAATTCTCTCAAatttgggcttttccagaaaaaaact
gtaTACCCCTGCTGAGGAGGTCCATTACTGTTCCAAGAGGGTAAGATTTG
ATATGTggtggaattccatagggagatacaaatatctgtcaaaaatactg
gaattcaatgggggtagctttttaaatcctactgaAATTCAGAGTTCCAG
aagggtttaaacctgaaattgcctggaactCCAGgagttacagcatttcc
agaCACAGAGGGATGAAACTGAGgaggtatacggtttttttctggaaaag
cccgtTTTGCTTTTTTAGTTTCTCCAAACATGTACATATAGATAATTTTT
GTGCTCATATATGAAACTAAA
Run BLAST on NCBI

transcript from alignment at sc0000563:97961..105955-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026154 ID=TCONS_00026154|Name=TCONS_00026154|organism=Clytia hemisphaerica|type=transcript|length=7995bp|location=Sequence derived from alignment at sc0000563:97961..105955- (Clytia hemisphaerica)
CAGACGTTTAAGTCTATTTTATAGCAGTGGAAACCATGTGAGTATATACT
TTAACCTTTATCACACCCCTGTCTCACAGCCTCTCTGAACTTTTTTCCTC
AGTGGGGATAAAAATTCCTGTTGAAATCCCAATGAGGATAGAAATTCCAA
GGTTAAAAAATCCATGGTTTTGGAGTGCAATTTTCTTTTGTGAGACAGGG
GTGTTTTATCTTATTTGTAATTTTTTTTCTCACTCACATCCACAGAAAAA
AGAGTTAGAATCTCATAAGATTCCGTTTAGCTCGTGAAAATCCTGGTCCT
GTAAACCAATCTTAAATACTGGTGAAAGTTGTAGCTGCCTAATAAATCTG
TATAGTATCGACTCTACCTGTACACGTTTTTTTTATAAGAACATCCAAAA
TTGTTGAAGTCTTCGGATTTTTGAGTTTTAAGCCTAAAAATGTTCTTAAC
ATGTTCTTATTTTGACCATTTTGGGGATATTTTTTATCATTTTGCGAAGA
AATAGGGTGTTTTTGAGTCCACAAAGTCTTAAAATGTTCTTAACTTGTTC
TTAACATTTTAGCCAGCGAAGCCTTATATTCTTATATAGTTTGTTATCAT
AAAAAAAAAAAAACGTGTAATGTATTTATAATGTTTCACAACCATATCCA
TCTTTCAATCTCGCATGTTGCTAGGTTACGAGGGCATAGATGGTAAACAA
TGCAAGGACATTGACGAATGCGTGAGGCATGGACCCGAGTTATGTCAACA
ACAGACCAGATCGAACAACACGTTTTGTATCAACACTGATGGAGGATTTT
TCTGTAACTGCACAGAAGGTACGTACATACAACATCCATCAAACATTCAT
AACGTCCGGGGCATAACGATGGGCATTCAAAACAACGTTGGTGCCNTATT
CATAACGTCCAGGGCATAACGATGGGGGCATTCGAAACAACGTTGGTGCA
CCATCTTTAAAGAAGATTAAAAGAGCAGTTTCAAAACTTGGCAGAAATCG
GCAATACTAAACAGTCCTGGCTTTTCAGGGATAAAAAGCTAAAGTTTTTT
CACCTTTTGTCTCAAGACATTTTTGAGTCACTGGTTGATATCCTGGTGAC
TATATGCAAGTCCAAGTCTGTGAGAAAGGGGTGTTTTAAATCCAGATGTC
AGGTCAATGTTAAACAACTGCGCCAAATATGACATGATATCTAACCATTT
CATTAGAACCCAGTCTGCAAACATGATATACCACGAAGATCACAATCCAT
AAATCCACATTTATCACTTTCAGCTTTTTACAAAAAGAAACATACAAGCC
CTTTACTTGGTTCATATTGCATAATATGCCAGGAATAACACTTGCTTACA
TCTGGATTTCTTACTTTCAGGTTTTTACAAGAAGAAGGGGCTTTGTATTG
ATATAGACGAGTGTGGTCGTGATCCTTATCCTTGCCATGCAGAAGCCACG
TGTCTCAACTCTCCTCCTGGTAGTTATTCTTGTGAGTGTGACCAAGGTTG
GTTGGGAAATGGAACTCATTGTGAAGGTGAGTAAATTAGGCCATGGGCTA
CATAACTTTTCTACAGGGCGTCTGGCGAAATAGTATCGATTTAGAACATT
TTATCGAGTAGAAAAGTTTGTGTGCTCGTTATCGCCCAGTTATTAGAACG
TATTACATCATACAGGCTTATTAGAAAAGTTTGAACGTACTAATCGATAG
TCTTTTCCTTGTTGCACAAATGTACGTCTTTAAAAATCAAAGGAAAAAGA
GAGATAACTCGAAATATAATTTTGTGAATGTACACATAAAAATTTTTGAC
TCGTAGTTGTGTTTCGACTTGATACTTTTTTTTCTGGACACTCTGTACTT
CTTGAAAGATTTTTCGTATCGCTACTGCATGGTGTCACTTCATGGTGTCA
CTTTTCCTAGGAAAACACAATGCTCCAATCACTTCAGTCCTCAGTTAAGT
AGCTCGCTGATAAATTGCCGAGGTCGTTGCGCTATTTCCATGTTTGCACT
ATTATGGCAAGTCCTCAATAGGGTTCATCAGAGTAGCTAGTACCCTGAGT
ATCAGAGGTTAAGTTTTCAAAGAAAATAGTAACCTCTGAAGACAAATAAT
AGAAATTTTATCGCGCATGTGTCAATCTAATCCCTGTAGAAAAAATCAAA
GATGAAGAGCAAATATTACCATATTAATGTCTAGCAGACTGTGTCAGTAT
GCAGTTTACTATTTACGAATTCCCCAGAAACCTCCAAGTGTAGTTGAAAT
GAGTTTATTTCGAAAGAAATCTTTTACATGATCCCCAAATGTATAACAGT
AATTACTAAACTTTTAATTATGGAAATGTCACTTTAATTGAATCGTAATA
ATAGACAGAGTTTATGTTATGGTTCTCTATCACTGACTCTTTTTACAAAG
CATTGCTGACTTTTTGTAAGTTGTGTTTTCAACGACGGGAATAAAAATAT
CGACTATGACGCTCATCCAAGATCTTGGTTGGTCGTCATGGTTACTTTTG
TCTTCGCTGATTGCGCGATGAATAGAATCTCGATTCGTCGGCACAGCGTA
AATATATGATTTTGAGCTGTGCTTTTCACGGTAAGTAGCTAGATCTTCTG
TTAGGGACTCGAACCATGTCCTTAAGTTTGTTTTTGCTTATTTTGATAGC
GCTCACGAAAAGATTGTATCAAGTCCATCAGTAAAACGAAAAAGTGATGC
AAGTACGAGATTTCAAATTCCAAAATTTCCATGTTCATTCGAATTTACTA
CATTTATTCCCATTGTTTCCACACAGATATCGATGAATGTAAACAACCTG
AGAAATACAAATGTGCAGTCAACGCCACTTGTCATAACTTTCTCGGTTCT
TATCGATGTATTTGTGATCATGGTTTCAAAGGCGAAGGTTCTGACAATTG
CGAACGTAAGCAATTTTATTCAGTATTTGGATTTATCAATAACTCAAACC
TTCCCAAAAGTTGATTAGCTCTAATACGAACCTTTTCATAATTTGAAGCT
CTCCATAACTTGAAAATCTAAAATTCAGACATATCCATAAGTCAAAAGTT
TGAAACTCGAGCGTCGGCTTAGCTCGAAAAGCTTTGATTTGAACTTCTTC
TTAACTTCTAAAACTGGATCCTCCCCATCAATTTTCATAAAAGGAACATT
TATAATTCGAACTTCGCCATAACTCAAACATCTCCATAACTCGAATTTAT
TAAACTCAAACCTATTAATATATACTATATCTTTATAACTTTTACACTAT
GTCTTGTCCCTGCCGATTTCACAAACGACCCTCTAAATCACCTTTTCAGC
ACTTGGTTGTTTCCCACCACCTGGTTGTTCTGGTCAGTTCCTTGCTAAAT
GGTGGAGACGCATTCCCTACATCGAGCAAGATGAAGCACACGAAAAAGCT
GAAGGCCTCTTCAAAGACATCCTCAACCTCATCATCACTGATATTTGTCA
GAATTGTTCACAAATCTTGTTCGACATGCCACCTGCGAATAATTCGAAAG
AAGTGGAAGACCAGGTGGAAGCTAATCAAACAGATTTTGGATGCCCAATG
TATGGATCTAAGGAACAAGAAAGCTTTCGAGATTTCCCTTTCATCCCCAT
TGGTAAGCTTGTACGAATTATACGAATACTTCAGTTAGAAATCACTAAAG
TTTCTATACCTCAGTTAGCTAAACCCAATGTTAACCAGTAATATTCGAAA
GATTCACCACGATGAAATTAAATAAACCGCTAGGTTCGATCTGTCATCGC
AAATGCGGTGCAAATATTAAGGCTTCATTTTTTTCTCAAAGATTCCTCTC
TACTAGCCCTTTCGGTTAGGTCATCATCATATCGCCCGTTCATTTCCCAT
CTTAATTTTTTTTCATAGTTGAATCACCAGGCGTAGCTTTCTTTGTCAAA
GATATCAAACAAACGTCAAGCCCTTTGCTTGGTTCGTTGACCGGATCATG
GCCAATCTTAGTGATGACACTTCTCTTGGCTTCTGTGTCTGGTATCATCA
TATGGTTCTTGGTAAGTGAGACCAAGGTCCAAGGATGTGTTCATTAAGAG
TACTGTCGTTTGGGGCAAGATTTCAATCTTGTTGAATTCCAACCTTTTAC
AATTTTGAGGCGTGGGAAATACAGCAACAACAATATCCTGGAAAACTTAG
GGGATTTTTATTCCGGGGAGTGGAATCTTAGCTCAATCGACGGTAAAACG
CATCCGATGCAAAGCTAAGTTATAATGGATAGTCCCTCTTTCAATGCAAT
GACTTCAAATTCTATTGTTCGATACGCTATTCCGAAGTTCAATGGTATTC
TCGAAATAATGATTAAGGTCTCAGTCGGTATAGAAATTTAGTTTTTGAAC
GGTGATAAAATATCTCGTTATTTTTACGAAAAGAAACACAGAATATTTTT
TTGACTGATTTTTATTGAGCTAGGAAGGGTTCCATCGGGTCTGTGGCACA
TAAGTGTGTGGTAAGAATAAGGAAACGGTAAAATTCCTCATTTTTCCAGG
TTCATTTTATTTTTTTCAGGACACGATTCAAAATCCAGATGAATTTCCAC
AATCATTCCTTCAAGGGTCCTGGGAAGGATTTTGGTGGGCTTTCATTACC
ATGACAACAGTCGGGTAAGATATTATTTTGATTGGTAGAAAATATCTCTA
TTCAGATTGGCTGAAAAAGAGGACTTCTTTAATTCGATTGGTTGAAAAAT
GAGAAATCTGTCTTTTTCTTGGCTGATTTAACATTTAACTTTAATTTTTT
TTCGTTCGAATTTCTCACTGCTATATATACTGTAGGATATACTGTTAAAT
TTCACAATGGTTTTGGACAAATCTTAAAGATATTTGATTGTTGTCACCTA
ACAAAATTCGTTATATCTTATATTCAATAAATTTAACTTTAATTACCTTT
TCTTTGTTTCTAGATACGGGGATAAAGCACCTCGCTCTTTTTCTGCACGT
TTATTTGGAGTCTTTTGGATCTTAGTTGGTTTGGTCATCATTTCAACTTT
TACGGCAACGATAACGACCGTTCTGACCACCACAACTTTGACAAGTGAAA
CCAAAATGTACGGAACGAGGGTGGGCGCTTTAAACAATTCCGAGGAATTC
CGATTGGGTGTTAAACGGAATGCCGATATTCAAGGTAAAGGTTTATCATT
ATCCATCTAGTCTGCCCTTTGCCAAAAATAAATAGTGTATATACACATCG
GTTTTTCTATAGTTTCGTGCGATGGAATTTTTACTCTCAAAGCATCAGTA
GGGAAAATATATGTCTCAAGGTACTGCACCTGATCTCAGTTCTTCCTCGG
TCTTCAGCTTATCACTTCCTTTTCTGTCTTGTGCATTCCTTTTGTTTACT
TTTTTTATTTATGGTTAGTCGTTAGTTTGTATTTTCTTCAGTGTATATAA
CTTGACTATATGTCTCTCGAACACTCTCACACTAACTCGCTACATGTTTT
TTATAAACATTGCACTTATAAGCATATATCTAGGCTCAGAAATGGCAAAA
ATTTAAGCATGTGATAAGGATCACCTTGAGCCTACGAAAGATGTATTTTC
CTGTTTTTGGCTGGGATTTTGCGGATTTTCGGAATTTTGCTTGGGATATA
AACATCCTAATATAAGCATTTTTCACCATTGTCAAGCCCTCGACCAAAGC
ATCTCCGATTCTGTTTTTCATATTTTTGCAGTATAAAAAGAAACATGTAA
ATCACTCTCTTTACTTATTCTATTTCGAACAAAAATCTTAGTTTCTAAGT
TCGGGCTAGGATAGGCCCAAATACTTTCTTCATCTTTTTCAGTCATTTTT
GACGTTCATTTTGATTATTTTCTCTTTTTTTTTACACAGAATACAACTCC
ATCCGTGAGATCATTCAAGCTTTACAGCGCGATGAGATCCAGGGTGCATT
GCTAGACACTTACATTGCCGGTGAATATCAATCAGATTTGAAAGAATATA
AACTTCAAGAGATTCTGGAGCATGTGTTCGTCTATGGTGTTGTATTAGCT
AGAGATGCAATCCAACTTGAGAATCGGATGAGAACATTCACAGAACAGAA
ACAATCCACTATTTATAACACTATTTCCAAAGTCATTAAACCATTGAAGG
AGATTAAGCATGGGTCAAACACGGTGACTGAATCGGTTGGGTTGTTTGAT
TCTTCGTCATCTTTCTTTACCAAGACAATGATCTTTGGCTGTATCCTTCT
CGCTTTCTTGGTCATTGTTGGATTGCTTTGGGATTGGTTGTGGAGACAAC
AAATGGCCAAACAAAAAGCTATGGACAGTATGTTTATATTACTTTTGTAT
TAGTACGTCTAGTACAACAACCGTTTTACGCACTCACGCTCTGCTCTATA
GAGATGCAAAATCCAGAAATTGAAATCAAAAACAAAAACAACTGGGTTCC
AATGTTTATTTTTCATGATTGACGTTAGATCTGGATAAGAATCATTAAAG
TGGTCCGTCAACCTGGTTAAATCTTCTTTCAGAGCCATGGCCTTTAGACT
GAATACTTGACATGCACATAGTAATCATTTGGGGGGCACTCGATTTCTAA
ACGACGGCATATGCCGCCAAAAAATGGCTTTCAAAAAGTACCCTTACAGT
GAATTATACCGAACGTTTCTTACCCTTACAGTGTAGTTTGATTTCATTTC
TTATTCTCCTAAAGCCAACACAATGTACAAAACAAATCAAAATGGGTATT
GTAACCAGCTACAATAGAAAAGCGGCCATTCGAAGTTCCGACAAGGGAAA
ATAGATCTTTGTAAAATATGACTGAAAATCAAAAAACCGAGGAAGTTTTA
TTCTGATGTTAAGTAAATCCATAGACAATCTGAATTTGAATAACCGAAAA
ATTTGATTAAATGAGGGTCGGAATAATCGGGAGTTTTCTGTGATACGTTT
TCTTTCTCATTCACCAGGCGACAATCGAAAGGACTCGAACGGTGGTAATT
GGTCATCTACAGATATCATTGAATATCAACAACATGCTTTTAAATCTGAA
GTGACAAACCTCCGAGAACAAATTGCTTCCTTTGCGAACACGTGGGTCAA
TCGTTTGAATGAAATCGAAAATCATCATGAGGATCAGCTCACCAAAGTAC
AAAGCTGGCTTTCCAAGGTATCATTTCCTTTCACAATTCTCAATCCTAAA
GGGGTTTGTTTCCTCGGTAATTGTACTTGTTGGATGAGTTTTCGCGGATA
CGCATTTCTGCGAAATTTTAAGATTTCGTAGGACTTGTTTTCGCGGGTGA
CGCCTTTTCAAATATTTTACGAAAAAAACAACAAGATTTTTAATGGCTAA
TAAGTTTGTTTTGTCCACGCTTGCTTTCATTATTTGATACATTTGATATT
TGATATAAGTGGAGGGGCTAAAGGCTCAAAATGAGATAAAATGAGAAAAA
AAGTATATTTTGCTCAAAAGTTCAAAAAAGCCTCCCCGGTTCCGCCGGGC
CTGTACAGCATGTGCATCATGGTCTTCTAAATGGAGACAGACTTTTATGG
AATGATCACTATCAAGAAAAATGACTTTATTTTTTTACAGACCAATTTGA
ACAAATCAAGTGGTAACAAACGAAAAATGTCGAAGAATTCACAAAACGGT
TGGCTGCATCATAAAATACCACAAGAAGATTTCTTGTAAATTCTCTCAAA
TTTGGGCTTTTCCAGAAAAAAACTGTATACCCCTGCTGAGGAGGTCCATT
ACTGTTCCAAGAGGGTAAGATTTGATATGTGGTGGAATTCCATAGGGAGA
TACAAATATCTGTCAAAAATACTGGAATTCAATGGGGGTAGCTTTTTAAA
TCCTACTGAAATTCAGAGTTCCAGAAGGGTTTAAACCTGAAATTGCCTGG
AACTCCAGGAGTTACAGCATTTCCAGACACAGAGGGATGAAACTGAGGAG
GTATACGGTTTTTTTCTGGAAAAGCCCGTTTTGCTTTTTTAGTTTCTCCA
AACATGTACATATAGATAATTTTTGTGCTCATATATGAAACTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014702XLOC_014702Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026154-exon-sc0000563-1575043694:105919..105955TCONS_00026154-exon-sc0000563-1575043694:105919..105955Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:105138..105281TCONS_00026154-exon-sc0000563-1575043694:105138..105281Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:104430..104585TCONS_00026154-exon-sc0000563-1575043694:104430..104585Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:103051..103179TCONS_00026154-exon-sc0000563-1575043694:103051..103179Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:102354..102656TCONS_00026154-exon-sc0000563-1575043694:102354..102656Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:101945..102087TCONS_00026154-exon-sc0000563-1575043694:101945..102087Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:101342..101436TCONS_00026154-exon-sc0000563-1575043694:101342..101436Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:100822..101042TCONS_00026154-exon-sc0000563-1575043694:100822..101042Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:99679..100116TCONS_00026154-exon-sc0000563-1575043694:99679..100116Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:98839..99038TCONS_00026154-exon-sc0000563-1575043694:98839..99038Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1575043694:97961..98415TCONS_00026154-exon-sc0000563-1575043694:97961..98415Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:105919..105955TCONS_00026154-exon-sc0000563-1510915933:105919..105955Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:105138..105281TCONS_00026154-exon-sc0000563-1510915933:105138..105281Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:104430..104585TCONS_00026154-exon-sc0000563-1510915933:104430..104585Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:103051..103179TCONS_00026154-exon-sc0000563-1510915933:103051..103179Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:102354..102656TCONS_00026154-exon-sc0000563-1510915933:102354..102656Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:101945..102087TCONS_00026154-exon-sc0000563-1510915933:101945..102087Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:101342..101436TCONS_00026154-exon-sc0000563-1510915933:101342..101436Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:100822..101042TCONS_00026154-exon-sc0000563-1510915933:100822..101042Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:99679..100116TCONS_00026154-exon-sc0000563-1510915933:99679..100116Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:98839..99038TCONS_00026154-exon-sc0000563-1510915933:98839..99038Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1510915933:97961..98415TCONS_00026154-exon-sc0000563-1510915933:97961..98415Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:105919..105955TCONS_00026154-exon-sc0000563-1491911889:105919..105955Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:105138..105281TCONS_00026154-exon-sc0000563-1491911889:105138..105281Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:104430..104585TCONS_00026154-exon-sc0000563-1491911889:104430..104585Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:103051..103179TCONS_00026154-exon-sc0000563-1491911889:103051..103179Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:102354..102656TCONS_00026154-exon-sc0000563-1491911889:102354..102656Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:101945..102087TCONS_00026154-exon-sc0000563-1491911889:101945..102087Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:101342..101436TCONS_00026154-exon-sc0000563-1491911889:101342..101436Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:100822..101042TCONS_00026154-exon-sc0000563-1491911889:100822..101042Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:99679..100116TCONS_00026154-exon-sc0000563-1491911889:99679..100116Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:98839..99038TCONS_00026154-exon-sc0000563-1491911889:98839..99038Clytia hemisphaericaexon
TCONS_00026154-exon-sc0000563-1491911889:97961..98415TCONS_00026154-exon-sc0000563-1491911889:97961..98415Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000563supercontigsc0000563:97961..105955 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.2937	2.10033	0.964996	0.841879	0.144464	0	0.257419	0.454845	1.90947	1.85183	2.04615	2.07915	1.00888	1.15907	0.219297	0.0762747	0.517705	0.686144	2.32958	1.9875	1.11689	1.08813	1.19174	1.74224	1.70192	1.32276	0.0706886	0.0149488	0.322628	0.224794
Blast
[Close]
BLAST of TCONS_00026154 vs. Swiss-Prot (Human)
Match: CD97 (CD97 antigen OS=Homo sapiens GN=CD97 PE=1 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 5.206e-22
Identity = 68/220 (30.91%), Postives = 102/220 (46.36%), Query Frame = 1 
Query:   31 KPCYEGIDGKQ---------CKDIDECVRHGPELCQQQTRSNNTFCINTDGGFFCNCTEGFY---KKKGLCIDIDECGRDPYPCHAEATCLNSPPGSYSCECDQGWL--------GNGTHCEDIDECKQPEKYKCAVNATCHNFLGSYRCIC------DHGFKGEGSDN-CEPLGC---FPPPGCSGQFLAKWWRRIPYIEQDEAHEKAEGLFKDILNLI 600
             P YE + G +         C+D+DEC +  P LC+         C+NT G + C C  GF    +   +C D++EC     PCH+   CLN+  GSY C C  GW          N T CED+DEC   + ++C  +  C N +GSY C C       HG      D  CE +      PPPG   Q L++++ ++  + +D     AE   ++++ L+
Sbjct:   94 SPGYEPVSGAKTFKNESENTCQDVDEC-QQNPRLCKSYGT-----CVNTLGSYTCQCLPGFKFIPEDPKVCTDVNECTSGQNPCHSSTHCLNN-VGSYQCRCRPGWQPIPGSPNGPNNTVCEDVDECSSGQ-HQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCEDMTFSTWTPPPGVHSQTLSRFFDKVQDLGRDSKTSSAEVTIQNVIKLV 305
The following BLAST results are available for this feature:
BLAST of TCONS_00026154 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD975.206e-2230.91CD97 antigen OS=Homo sapiens GN=CD97 PE=1 SV=4[more]
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