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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025835 ID=TCONS_00025835|Name=TCONS_00025835|organism=Clytia hemisphaerica|type=transcript|length=1116bp
agaagcatgactggaaaatttcttttttttcttttttgacacatttttcg
aatttttccaagctattttcctaaccttttttttgacatttttagtcaaa
gttttgacactaaaatttgaatatctttataaccacttatcctctggagg
cctatgacccctcattttctttctttttcaaagctctacaagataggata
gattttgaaaaaaaaattaaaacttgaaaaatcttctggagttgctacac
TAGTAGAGTAAgataataaaaaattcaaaaattaatttctacTTTCTTGG
TGACAGGAAAGAAAATATGAATTATACTTACTGGGGGAAATCTTGCTTCG
TATTTACGTTTCTTTGAAGGCATTATTTGGTCgtcttttgtaaaaaagaa
aaaagccaCCAGCTGCCGActgctgtttttaaaaacttgaGCGATTTTCT
GCTTTGCACAACTTTAGCTActcttttgatttgattttcttgCTGACACA
GCAATTCGAATATAGCTTCAAAGCTAAACTCTTTTTTCtctgtttatatt
tttcttcgcaTAAGACTCGATTGTTCTAGCCTAGTTTCTTAATCCTGAAG
CGTGTAGAGTGCAGCGTCATTTTGTCACTCAGCCTCGAAAGTGCAGCCAA
TCTTGACACTTGACACCACACCCATTCTGTCCTGATTTTCGATTAGCAAG
AAGaaaaacatgAAGCTGTGCGGCGTTGTCCTTGTTTCATTTCTCATTTC
CATCATTCTTGTTGACGAGATTGGCGCAAACAAAAAGAAACTACAAATTG
GTGTCAAAAAGAAGGTTGAAAACTGTCAACGAAGATCAAAGAAAGGAGAC
ACTTTACACATGCATTATACTGGCAAATTGGAAGATGGTACAGAATTTGA
TAGTAGTATTCCAAGAGGCGAACCTTTCACTTTCACCTTAGGCGCTGGAC
AAGTCAtcaaagGCTGGGACCAAGGACTTTTGAATATGTGTGAGGGGGAG
AAAAGAAAATTATCCATCCCATCAGATCTTGGATATGGCGATCGTGGAGC
ACCACCAAAGATACCAGGTGAAATGAATTATCTAGCTATTTTTCTCAACA
ATCTTAACAAACTTAA Run BLAST on NCBI protein sequence of TCONS_00025835-protein >TCONS_00025835-protein ID=TCONS_00025835-protein|Name=TCONS_00025835-protein|organism=Clytia hemisphaerica|type=polypeptide|length=135bp
MKLCGVVLVSFLISIILVDEIGANKKKLQIGVKKKVENCQRRSKKGDTLH
MHYTGKLEDGTEFDSSIPRGEPFTFTLGAGQVIKGWDQGLLNMCEGEKRK
LSIPSDLGYGDRGAPPKIPGEMNYLAIFLNNLNKL Run BLAST on NCBI transcript from alignment at sc0000549:204590..212826+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025835 ID=TCONS_00025835|Name=TCONS_00025835|organism=Clytia hemisphaerica|type=transcript|length=8237bp|location=Sequence derived from alignment at sc0000549:204590..212826+ (Clytia hemisphaerica)
agaagcatgactggaaaatttcttttttttcttttttgacacatttttcg
aatttttccaagctattttcctaaccttttttttgacatttttagtcaaa
gttttgacactaaaatttgaatatctttataaccacttatcctctggagg
cctatgacccctcattttctttctttttcaaagctctacaagataggata
gattttgaaaaaaaaattaaaacttgaaaaatcttctggagttgctacac
TAGTAGAGTAAgataataaaaaattcaaaaattaatttctacTTTCTTGG
TGACAGGAAAGAAAATATGAATTATACTTACTGGGGGAAATCTTGCTTCG
TATTTACGTTTCTTTGAAGGCATTATTTGGTCgtcttttgtaaaaaagaa
aaaagccaCCAGCTGCCGActgctgtttttaaaaacttgaGCGATTTTCT
GCTTTGCACAACTTTAGCTActcttttgatttgattttcttgCTGACACA
GCAATTCGAATATAGCTTCAAAGCTAAACTCTTTTTTCtctgtttatatt
tttcttcgcaTAAGACTCGATTGTTCTAGCCTAGTTTCTTAATCCTGAAG
CGTGTAGAGTGCAGCGTCATTTTGTCACTCAGCCTCGAAAGTGCAGCCAA
TCTTGACACTTGACACCACACCCATTCTGTCCTGATTTTCGATTAGCAAG
AAGGTAAGCCTTTAGTTTTCACTTTTgtaatgttttatatttttaatgtt
ctccatatcatagaggtataaagaaaaacaggagttgaatgtgtcggtaa
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcga
caaaaaactttcgaattttttatcggcattgggccgataagggggtgggg
gggtccaactacataccgataaaaaaacaagtattgggaCGAAAGTCatt
tcagccaatttctttctgatttcgtccacaaactcaactgaaagcataca
atttcacttgctttcaccttcGCGCACAAATTCGCTACTTTAAAAATACA
GTTTTGAATTAGCTTTGATAAAATACCtctttttttcattggccagcgTG
CTGCCGTTTCCTTCGAAATGTTGCGACTTCATCGCgtctttttaactttc
gttttgattaacaatatcaatgcgggtatgaacaaactcaatgttggtgc
aaTTAGACAAAAACTCAACGAAGACGGGTGGGAAGGCAAGATCAACGCGA
TGGCGGACatgattggaaaaaattgtgttttcgaaaattttggccgataa
gagcaagggggggagggggtctgaagcttatcagcccaatgccgataaaa
aattcaaaagttttttgtcgaagacccccaatagagttcaccttaaggaa
aacattgatcgaaaaatcttatcatttgatgaaggattgccaagtttaca
ggcctttttttagtccaaatattttcttaNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtggataa
aagagctcattaaaaatgcacgatatatgagattatgagcatgcatacat
cgtaacttttttaatcgtagggcgagcttggctacaatagcatacttctc
ctgtttctttatacctccatgtccATATCCAGTCAGTTTGCAAAAAGTGT
GGCACGTTTGCTCAAGATCTTCGATCGAGTGCACAAATACTCGTAaatAG
TTGTGGaggtgcaaaatttgagcaGACAGTTTTTAACCTCAGGTGCAGAG
TTGAGCTATTTTTTAAACAAGTGCAGCCAATTTAagcaattttttgcctt
tttgggcGAATTTCAGAGCTATGCattgtaaaatttaaaaaagtgccGTT
TTTTTTCGTGCACTGGAACACCGGAACGTTCTGGTGCACTTCCGGTGCTT
CCAGTGCAAGATTTTTCTGAATCAAGCTGCACTGGAACGTTCCGGGGCTT
CCGGTCAGTCTGAGAAATCCTTCTAATTGCACGCTTAAAATTCCGAGATT
TAAACGCATAACCCCAGGCgcagttaatcgatataatcgttaatcttgag
taatcgataaataatcgataagtaatcgatggattagatatcgattaacc
gatagaattgATAGGTAATCGATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNaagattatcgattatatcgattaactacgcctggatAA
CCAGACGATCttaatcgaacggaatcgacgatcaaaccagtcgaaccaaa
tcaaacgcaatctaccgattgaaattcgattgtcaaacgcaatcgaatct
caatggaatattaccgcaattttcagattcgattgatattcgattgcgta
cgattgatgttcgattgtgtttgattgcattcgatcgtcgattcattgac
ccccgcattgttcattgcataatttctacaggaaatcgaaagtaaattca
atgggcttgtgatgtttgagagcttggatgttgggaagctgcaaaaataa
agccagacgatctcaatcgacgatcgaaccagtcgaacaacaatcaaacc
aatcgaatattacccagaattttgacgtttgattgagattcgattgcgtt
cgacaatcaaatttcaatcggtcgattgcatttgatttggttcgactggt
tcgatcgtcgattccgttcgattgagatcgtctgggcaTAATTGCACGGC
TGGCTATCAAATTGTAAGGTTTTTAACAGTGTTTTTACCTATCAATTTCA
TGTTCCAAATAATCTAAATCTGTATTATAATCATTGCTTACATTGAGATA
CATCATTTACAAgttattagaaaagaaataaaaacacttttcctTTGTCT
CGCACAAAATAGACGATTTTCCTTGAGTTTtctcggaaaaaaatctggaa
tgCTTGGTCAATTTTACGCAAAATTCTACGAAGATTCcaattcaaaaatc
agtttttgtccATTTGACCATGGTTCCATCCATCAAAAAAGAGAGCTGTA
TATTGCTCAAGCTTCTTCAAGCAGGGCGGAAaattaagcgtgcaattgca
catGGGTGGACTAGGGCGGACTATGATAAGCGCGCATTTACAAGTTTACG
CCCCGGAAGTTAAGCGTGCAATTAGAAAGTAAAAAGACattctgataaat
aacgagattgctcacgggaccCGCGCAAGCAAACCCGCACCTGTCAATCA
TCTTTTAGAcatgtcaatcatttttatctgcttttcttttcacttgtggt
ttcgaaaaaagtgtttgtaagaaaataaaaaaagacgaaagtcgattttt
atgcatttttttagATCTAAGTTTTGGAATGGtactggattttcaagaga
agggaaagtcataactcttgactcttgactctccacccgctaaccaacct
gatccattttgaaatactgtacttgagtCAAACTGCACTGAGGTAACACT
ACTTATAATATTtctgtttcttaaaaatataacgggaatttccaaaaata
tcaataagagctcataaaaccagaaaaaggttggtcaatgctgacaaaat
aacacaaactTCAACGCACCGTAATAGGATTCAAACTCtcaaaaataata
tttatttatctGGAAGCTCAACGCCTTTTCCACTCGGCCACTTAAGATTT
TGGTTTACCAAACTTTGATtaaatataatatttctttattggccatgacc
tgtataattttatttGCCCTGTCAAGGTATTAACTTCTTAAACAAATGAT
GTTGGATCATTTCTCCAACATGCGGGAGCCGATCACTCATCGAGATTTTC
AGGGGATTTTCAGGACTCTTTAGTCTTTAGTGGGACTGCAGCAAACGGGT
TGTAAACCCTGCTAGTGActttaaaattagaatttcctTCTGTGGGGTTA
GGACACTCTCCAATCTCCTTAAATTCTCAAAAGACTGAAGAGAGGAGCTT
TTTCTTGTATAAAGTACCCATTCATTATACAGCAGACAGAATTCACAGAG
CGTACACGCGCGggctttttttaatgttttttgtatTTCGTAAcatatat
tattttataatttgttaattttaaaataaaatttattttcttcttcacga
cTCTCGAGCAACACGCTCTCCCTGAACAGCTCATAGTAGTAAAAATTGGT
AACATTGGTGGCGGCACTCTaaagaaagaatgaaaattaaagttatgaCT
GTCGAAGATCCGTGGTACGGTAGATTTTGTTAAGCTTGAAACTAGACAAA
GTGACCTTTGCTCAAAAGTCTGGATAAACTGCCGAAGTTACGATGGGACG
CACAAAAATTGATCTAGATTTCAACATAGATCTAGATGAGATAATTGTTT
CATACATACAACAATTTAACTTACGCTGTCTCAGGCTCTCAGGCACTTCT
TGAGTTTAGTGAAAGCAGTCTGTAATTATTACAATTATTGTGATATTGAC
GAATCGTCTCTGCTTCGGTTGACCTATTTTTCCTGaataaaagaaagtaa
aaacattatttgaactTGAACTTATTATTTACTTTAAAGGTATACTAATT
TAAATTAAGATCATATAAAGATCAGATGCGTACTTCTTTACTTATCGACG
ATTTTCCCATGTGTGATGCAcgtgataattttttataattgagCAAAGTC
CGCCATACCGTATTATTCCCAACTAACTCTATCGCTGGATAGCCCTGTAT
CCGACGATCATCCCTTTTATTGCGCAGTGATCAAATAAAAAGTTTGGTTG
GTACTGGCTAATCACATTTTTTTTCGTGACCCTGTCTAAACAGCTTTTTA
GAGCGTGCAAAAATCCCTTGCACCGGAAGAGCACCAGAATTTTCCGGTGT
AAAAAATGGCGTTTTTTTAGCTGCACTGGAAAACACCAGAGATTTCCGGA
GCGGCACCGGGAGGGTCCTAAAATTTTTCAGGTGCAAACTTCATTGTATT
TCTGAATTTTTCCTCGAGTGCAGCcttgccatactctgcaaactggctcC
ATATAAAAAGGTGATTCCTTCTTTGTGTATGTAAAAGCGAGATACCGTCA
ACtgttctaacttgggacgattggttgaaacatgatCTCGAAACATGCat
tatctggtctgtattttcacttactgtactgtaaaatcaaaagagaaatc
gtgcattttttaatacgccgttccttaagtcaaatcaaatgactttggag
gttcggtgaaatggtggccgaattgccgtcccatgttttgtcagatagtc
ccaagttagagcagttgacagtatagAGAGAAAGACACAGGCATGGTGAA
TTAATAAACAGGTTTACTGTcacattgaaaaaatatttgatgcagcaaaa
tttcattattcactATTCATTATTTTTACCTGATCCAGCTTTCCGCTTTT
GACCAAGCATCAACATTGTCTTTCTTGTTCATGAAATCCAAAGCAATTTT
GATTTTGTACTTAAAAACGCATATGCGCTGGCCTTCActtttactcttag
gtgccaaataaactgggggggttcgaataaacgggggggtttgaaaattt
tcgaaattttaataaacggtgggacctaattgccgggggggttggaaatt
gtacttctgaaaaccccaaaataaggtaaatatcaaggctaaaatcaggc
tttttgttTCCGTGGGTGATaaatttacacttttttattttagaaaaaca
tgAAGCTGTGCGGCGTTGTCCTTGTTTCATTTCTCATTTCCATCATTCTT
GTTGACGAGATTGGCGCAAACAAAAAGAAACTACAAATTGGTGTCAAAAA
GAAGGTTGAAAACTGTCAACGAAGATCAAAGAAAGGAGACACTTTACACA
TGCATTATACTGTATGATAGTATCTTTATTTGATTGAATACCAGGCCATT
CTTCATGTCATTTTTGTAACCAGTCATTTTCAGACGATGTCACCACAGTT
TTTTCCACTTTTTAGTAAAAATAGCAAAGGAACAGGGGGTGAATGtattc
caaagattttcacGAGGGGTCATAGCTTGGTCTGCCAGGGTCTTGCAGGG
TGGCTTAGAGACGAATAAACAAACTGTCTACTGTGTAGTAAACAACCCTC
ATTATCCACTTTCTTATATGGTAAAGATCCTTTGTGAAAAATATACCATA
CACCCTTATCCATTTTTTGAATTGTCAATAGGGCAAATTGGAAGATGGTA
CAGAATTTGATAGTAGTATTCCAAGAGGCGAACCTTTCACTTTCACCTTA
GGCGCTGGACAAGTCAtcaaaggtaaacacaaaagagtTCGGTCTTTAAA
TGAAACTGTTTCTCTCACAGTCAGATTTAAAGACTTTAAAAATGACCTTT
CGAGCTTTACAGGTTTTACTTTTACATTAAatgttcctgtttcatattaG
ACACATATCTTATATCAGGCTGGGTCCAGCTGGGTCTCCTAATGTTGTAA
TTGTGTTCTATTTTtttgctgaataaacaaaaatagtttttcttttcctc
tgtctgaccaatcttgctccacattcatGTCAATTAAATGTGACAAAGCt
cgtaaattaaaattgatgagtagacgaatgatatcactcttgttttaaaa
agaaaacctttaacatgATTCGTCTTTTATAATTTACCATAGGCTGGGAC
CAAGGACTTTTGAAGTAAGAAACTTTactttagtattttttttttcatta
cttGTTGTTATTGTTTNTTGGGACCAAGGACTTTTGAAGTAAGAAACTTT
actttagtatttttttttcattacttGTTGTTATTGTTTAAAGCTAACTT
TTgtctatgtttttatttttcatctttatttttaattttcttgtgcgtaa
agcaaaaaaaaggattgaattttGAGGATttgcaaaaatctttttgttat
tttcaatgTATTTGTAATAGCTGCttcaaaatttagctttttcttcattt
tccagTATGTGTGAGGGGGAGAAAAGAAAATTATCCATCCCATCAGATCT
TGGATATGGCGATCGTGGAGCACCACCAAAGATACCAGGTGAAATGAATT
ATCTAGCTATTTTTCTCAACAATCTTAACAAACTTAA Coding sequence (CDS) from alignment at sc0000549:204590..212826+ >TCONS_00025835 ID=TCONS_00025835|Name=TCONS_00025835|organism=Clytia hemisphaerica|type=CDS|length=1620bp|location=Sequence derived from alignment at sc0000549:204590..212826+ (Clytia hemisphaerica)
atgAAGCTGTGCGGCGTTGTCCTTGTTTCATTTCTCATTTCCATCATTCT
TGTTGACGAGATTGGCGCAAACAAAAAGAAACTACAAATTGGTGTCAAAA
AGAAGGTTGAAAACTGTCAACGAAGATCAAAGAAAGGAGACACTTTACAC
ATGCATTATACTGGCAAATTGGAAGATGGTACAGAATTTGATAGTAGTAT
TCCAAGAGGCGAACCTTTCACTTTCACCTTAGGCGCTGGACAAGTCAtca
aagGCTGGGACCAAGGACTTTTGAATATGTGTGAGGGGGAGAAAAGAAAA
TTATCCATCCCATCAGATCTTGGATATGGCGATCGTGGAGCACCACCAAA
GATACCAGGTGAAATGAATTATCTAGCTATTTTTCTCAACAATCTTAACA
AACTTatgAAGCTGTGCGGCGTTGTCCTTGTTTCATTTCTCATTTCCATC
ATTCTTGTTGACGAGATTGGCGCAAACAAAAAGAAACTACAAATTGGTGT
CAAAAAGAAGGTTGAAAACTGTCAACGAAGATCAAAGAAAGGAGACACTT
TACACATGCATTATACTGGCAAATTGGAAGATGGTACAGAATTTGATAGT
AGTATTCCAAGAGGCGAACCTTTCACTTTCACCTTAGGCGCTGGACAAGT
CAtcaaagGCTGGGACCAAGGACTTTTGAATATGTGTGAGGGGGAGAAAA
GAAAATTATCCATCCCATCAGATCTTGGATATGGCGATCGTGGAGCACCA
CCAAAGATACCAGGTGAAATGAATTATCTAGCTATTTTTCTCAACAATCT
TAACAAACTTatgAAGCTGTGCGGCGTTGTCCTTGTTTCATTTCTCATTT
CCATCATTCTTGTTGACGAGATTGGCGCAAACAAAAAGAAACTACAAATT
GGTGTCAAAAAGAAGGTTGAAAACTGTCAACGAAGATCAAAGAAAGGAGA
CACTTTACACATGCATTATACTGGCAAATTGGAAGATGGTACAGAATTTG
ATAGTAGTATTCCAAGAGGCGAACCTTTCACTTTCACCTTAGGCGCTGGA
CAAGTCAtcaaagGCTGGGACCAAGGACTTTTGAATATGTGTGAGGGGGA
GAAAAGAAAATTATCCATCCCATCAGATCTTGGATATGGCGATCGTGGAG
CACCACCAAAGATACCAGGTGAAATGAATTATCTAGCTATTTTTCTCAAC
AATCTTAACAAACTTatgAAGCTGTGCGGCGTTGTCCTTGTTTCATTTCT
CATTTCCATCATTCTTGTTGACGAGATTGGCGCAAACAAAAAGAAACTAC
AAATTGGTGTCAAAAAGAAGGTTGAAAACTGTCAACGAAGATCAAAGAAA
GGAGACACTTTACACATGCATTATACTGGCAAATTGGAAGATGGTACAGA
ATTTGATAGTAGTATTCCAAGAGGCGAACCTTTCACTTTCACCTTAGGCG
CTGGACAAGTCAtcaaagGCTGGGACCAAGGACTTTTGAATATGTGTGAG
GGGGAGAAAAGAAAATTATCCATCCCATCAGATCTTGGATATGGCGATCG
TGGAGCACCACCAAAGATACCAGGTGAAATGAATTATCTAGCTATTTTTC
TCAACAATCTTAACAAACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025835-exon-sc0000549-1491911889:204590..205292 | TCONS_00025835-exon-sc0000549-1491911889:204590..205292 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1510915933:204590..205292 | TCONS_00025835-exon-sc0000549-1510915933:204590..205292 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1575043694:204590..205292 | TCONS_00025835-exon-sc0000549-1575043694:204590..205292 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1491911889:211433..211600 | TCONS_00025835-exon-sc0000549-1491911889:211433..211600 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1510915933:211433..211600 | TCONS_00025835-exon-sc0000549-1510915933:211433..211600 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1575043694:211433..211600 | TCONS_00025835-exon-sc0000549-1575043694:211433..211600 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1491911889:211921..212011 | TCONS_00025835-exon-sc0000549-1491911889:211921..212011 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1510915933:211921..212011 | TCONS_00025835-exon-sc0000549-1510915933:211921..212011 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1575043694:211921..212011 | TCONS_00025835-exon-sc0000549-1575043694:211921..212011 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1491911889:212382..212403 | TCONS_00025835-exon-sc0000549-1491911889:212382..212403 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1510915933:212382..212403 | TCONS_00025835-exon-sc0000549-1510915933:212382..212403 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1575043694:212382..212403 | TCONS_00025835-exon-sc0000549-1575043694:212382..212403 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1491911889:212695..212826 | TCONS_00025835-exon-sc0000549-1491911889:212695..212826 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1510915933:212695..212826 | TCONS_00025835-exon-sc0000549-1510915933:212695..212826 | Clytia hemisphaerica | exon |
| TCONS_00025835-exon-sc0000549-1575043694:212695..212826 | TCONS_00025835-exon-sc0000549-1575043694:212695..212826 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000549 | supercontig | sc0000549:204590..212826 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001179 | PPIase_FKBP_dom |
Blast
BLAST of TCONS_00025835 vs. Swiss-Prot (Human)
Match: FKBP2 (Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Homo sapiens GN=FKBP2 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 7.400e-44 Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 2
Query: 815 VENCQRRSKKGDTLHMHYTGKLEDGTEFDSSIPRGEPFTFTLGAGQVIKGWDQGLLNMCEGEKRKLSIPSDLGYGDRGAPPKIPG 1069
V++C +S+KGD LHMHYTGKLEDGTEFDSS+P+ +PF F+LG GQVIKGWDQGLL MCEGEKRKL IPS+LGYG+RGAPPKIPG
Sbjct: 39 VDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPG 123
The following BLAST results are available for this feature:
|
